Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03924
- Subject:
- XR_948282.3
- Aligned Length:
- 2349
- Identities:
- 763
- Gaps:
- 1550
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCACATCCAATGGGCATGCAGCGCGCGCAGAAGTCCGGGGCTGGCAAGCGCTTCCTGCGCAGCGCCTAGGCGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGAGTTTGTGACGCTGTGATGGTCTAGAGGCTGGAGATTCAAGATCTGGGTGCCATCATTTTCTGGTTCTGT 148
Query 1 --ATGA------ATCAGGAGGATCTAGATCCGGATAGTACTACAGATGTGGGAGATGTTACAAATACTGAAGAA 66
|||| ..||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGATGACCCTCTTCCAGGAGGATCTAGATCCGGATAGTACTACAGATGTGGGAGATGTTACAAATACTGAAGAA 222
Query 67 GAACTTATTAGAGAATGTGAAGAAATGTGGAAAGATATGGAAGAATGTCAGAATAAATTATCACTTATTGGAAC 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAACTTATTAGAGAATGTGAAGAAATGTGGAAAGATATGGAAGAATGTCAGAATAAATTATCACTTATTGGAAC 296
Query 141 TGAAACACTCACCGATTCAAATGCTCAGCTATCATTGTTAATTATGCAAGTAAAATGTTTAACCGCTGAACTCA 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGAAACACTCACCGATTCAAATGCTCAGCTATCATTGTTAATTATGCAAGTAAAATGTTTAACCGCTGAACTCA 370
Query 215 GTCAATGGCAGAAAAAAACACCTGAAACAATTCCCTTGACTGAAGACGTTCTCATAACATTAGGAAAAGAAGAG 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTCAATGGCAGAAAAAAACACCTGAAACAATTCCCTTGACTGAAGACGTTCTCATAACATTAGGAAAAGAAGAG 444
Query 289 TTCCAAAAGCTGAGACAAGATCTTGAAATGGTACTGTCCACTAAGGAGTCAAAGAATGAAAAGTTAAAGGAAGA 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCCAAAAGCTGAGACAAGATCTTGAAATGGTACTGTCCACTAAGGAGTCAAAGAATGAAAAGTTAAAGGAAGA 518
Query 363 CTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGGAATCTCTTAATGTACTACACAGTGAAT 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGGAATCTCTTAATGTACTACACAGTGAAT 592
Query 437 TGAAAAATAAGGTTGAAACATTTTCTGAATCAAGAATCTTTAATGAACTGAAAACTAAAATGCTTAATATAAAA 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGAAAAATAAGGTTGAAACATTTTCTGAATCAAGAATCTTTAATGAACTGAAAACTAAAATGCTTAATATAAAA 666
Query 511 GAATATAAGGAGAAACTCTTGAGTACCTTGGGCGAGTTTCTAGAAGACCATTTTCCTCTGCCTGATAGAAGTGT 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAATATAAGGAGAAACTCTTGAGTACCTTGGGCGAGTTTCTAGAAGACCATTTTCCTCTGCCTGATAGAAGTGT 740
Query 585 TAAAAAGAAAAAGAAAAACATTCAAGAATCATCTGTAAACCTGATAACACTGCATGAAATGTTAGAG------- 651
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAAAAAGAAAAAGAAAAACATTCAAGAATCATCTGTAAACCTGATAACACTGCATGAAATGTTAGAGGTCCTCT 814
Query 652 -------------------ATTCTTATAAATAG--ATTA--TTTGATGTTCCAC---ATGA---------TCCA 690
||| |.|||.|| | |||| |||.||||| || |||| ||||
Sbjct 815 CTGCCTTGGGGTAACCACTATT-TGATACAT-GCTATTATTTTTCATGTT--ACGTTATGATTATTCTCTTCCA 884
Query 691 ---------TATGTCAAAA------------TTAGTGATTCCT-TTTGGC-------------------CACCT 723
|.||||.|.| |||.|||.||.| |||.|| |||.|
Sbjct 885 TCATTTGACTGTGTCCAGAAGATCATCCATTTTAATGAATCTTGTTTTGCAATAATCAGAGAGCCAATTCACAT 958
Query 724 TATGTTGAGCTGCT----GCTGCGTAAT----GGA-----ATTGCCTT-------GAGACATCCAGAAGATCCA 777
.|||.||...||.| .|||..|||| ||| |.|.|||| ||||.|.||||.|||..|.
Sbjct 959 GATGGTGGATTGTTCGTATCTGTTTAATCCTGGGAAATATAGTACCTTTATAGTGGAGAAACCCAGCAGACACC 1032
Query 778 ACCCGAAT---------AAGATTAGAAGCTTTC------CATCAG----------------------------- 807
|||..||| |||.||| .|.|| .|||||
Sbjct 1033 ACCTTAATCACGTGGTCAAGGTTA----ATATCACAGGTAATCAGATGTCTCAATAATCAAAATATCTTGATAT 1102
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1103 GATGTAATTAGAAAGACACAACATTGTTTCTGTAGTATTATTGCCAAAAATGCATTAACCTCATTCTAATCATG 1176
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1177 AGAAAATGTCAGACAAATGTGAATGAAGTTTATCCTATGAAATAACTTGCCAGTACTCTTGAAATGTGTCAAAG 1250
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1251 TTATGAAATACAAGGAAAGCCCGATAAACTCAAATTGGAGGAGACTAAAAAGAATTAATAATTACTTGTAAGGT 1324
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1325 GGGATCCTACATAAGTTCCTTTAACTGAAAAAGAACAATACTGGAAAAAGTGGTGAAATTTGAATAGGGTCTAC 1398
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1399 AGTTTAGTTAATACTATTATATCAGTGTTAGTTTACTGGTTTCAATAATTTTAATATAATTATTATAAAATGTT 1472
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1473 ACACATAATTGTATCATGATAACTGACTCGGAGCTTGTAGATGGGGCAGACTGAAGCAATTTAAAACCTTTAGG 1546
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1547 TGGGGAGGGGTGAAAACAGAGTGGGAGTAAGAGAATAAAAGTGACAAGCCTTAAACATAACACTTTTCTAGTAA 1620
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1621 TATGACCGTGCAAATCAAAATGAAGGAATCTAATGCAAAGATAGCCAAGGCAAACAGATTTTGTTGTTTAGCTC 1694
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1695 TCCCTTCTCGCTTTCTAACAGAATTGATTTTTGTTTGGGTAATCCACTCTTCTCTATATAGCTGTGCATTTAGC 1768
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1769 TAAACCAAACGTGCTTATCTGAATCCTTTTTAGTGATTTATTAAAGAATATATTTGATCCAATATTTACTTATT 1842
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1843 ATGTATCTTCTGAGGAACTTTGGAGAAATTTTTTTTTCACTGATTAAAAAAATGCCAGTAGGAAGTGGCTTCTC 1916
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1917 TTGTTCTGGTGGATATTACTTGGTCTGCATGGGACATCTGGAACTGCTTAGTCATTTTGTAACCATAAGGAGAG 1990
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1991 CTTGCCATGGCCAAATCTGGCATGTTTAGTATGGCAGAAACACAAAAGAAAAAGAGCAAATTCTGATAATGTTA 2064
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2065 TTGAGCAAGTGAATTAATTTATTCTAGAGATTTCCTACTTGGGAACATGATACGTAAGATAATAAATTTTCCTT 2138
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2139 CTGGTTTAAGTCGATTGAGACAAGGTTTTATGTTGCTTGAAACTGAAAGCATCCTAGCTAGTAGCAACACCTAA 2212
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2213 CAAAATCATGAAGTGGAACATTTATTTAGTCTTGATAAAATTAGTTTTATAGAATAGTGTGACAGAGGCTTTAG 2286
Query 808 ------------------------------------------------------- 807
Sbjct 2287 AATGGGTATTTTGAAGATGTTTGAAAAAACAAATTTATTTTAAAAGACTTTTTTT 2341
