Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03965
- Subject:
- XR_244222.4
- Aligned Length:
- 1973
- Identities:
- 1115
- Gaps:
- 858
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCACCACTGTGGGCAGCCTCACTTGGCTGCCGCCCCGAGACCCCAGCCCGTACCTGGGCTTCGCGCCCGCCAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGGCCCAGCCCTGGCTCCTGCGCCCTGTGGCGGCCACCTCCATCGCCTTGCTTTCCCTTCGGGCACTGGGGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCTCAGGGCGGGACATGGGTGAACGGAAGTGGAAGCTGTGAGCGTCGCAGCCCGAGGCGCCGAGGCCTGAGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGTCGGGGCCACAGCGACGCTCGCATGGAGAGCGCTGGGCGCTGGGCTGTGCACCGACGGCTAACCTGGACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACGGTCTCTGCGGGGCGGGAGCTTTGCAGAACCGACTGGCCGACTGGGGCGCGGGAACATGAGGCTTGGCTAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGCCCGCTGCGGGCCAGGCGCGCGGTGCGCAGGCATACCCGGGTCGCGGGTGAACACCGCGGAGCCCCGGGAC 444
Query 1 ------------------------ATGGTCTTCTGTCTGTCGAGCGAGGAGCCGCGCCGCCCGCTGCGAAGCGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTGCCTGTCGTTGCTGGTGGCGGCATGGTCTTCTGTCTGTCGAGCGAGGAGCCGCGCCGCCCGCTGCGAAGCGA 518
Query 51 CATGGTCCACTTCCAGGCCTCGGAAGTCCAGCAGCTGCTACACAACAAGTTCGTGGTCATCTTGGGGGACTCCA 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CATGGTCCACTTCCAGGCCTCGGAAGTCCAGCAGCTGCTACACAACAAGTTCGTGGTCATCTTGGGGGACTCCA 592
Query 125 TTCAGAGGGCTGTGTACAAGGACCTGGTGCTCTTGCTCCAGAAAGACTCACTGCTCACAGCTGCCCAGCTGAAA 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCAGAGGGCTGTGTACAAGGACCTGGTGCTCTTGCTCCAGAAAGACTCACTGCTCACAGCTGCCCAGCTGAAA 666
Query 199 GCCAAGGGGGAGCTGAGCTTTGAACAGGACCAGCTGGTGGCTGGGGGCCAGCTGGGCGAGCTGCACAACGGGAC 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCCAAGGGGGAGCTGAGCTTTGAACAGGACCAGCTGGTGGCTGGGGGCCAGCTGGGCGAGCTGCACAACGGGAC 740
Query 273 ACAGTATCGTGAGGTCCGCCAGTTCTGCTCGGGCTCTGGCCACCACCTTGTGCGCTTCTACTTCCTCACTCGTG 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACAGTATCGTGAGGTCCGCCAGTTCTGCTCGGGCTCTGGCCACCACCTTGTGCGCTTCTACTTCCTCACTCGTG 814
Query 347 TTTACTCCGAGTACCTTGAGGATGTTCTGGAAGAGCTGACATATGGACCTGCCCCGGACCTGGTGATCATCAAC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTTACTCCGAGTACCTTGAGGATGTTCTGGAAGAGCTGACATATGGACCTGCCCCGGACCTGGTGATCATCAAC 888
Query 421 TCCTGCCTCTGGGATCTCTCCAGATATGGTCGCTGCTCAATGGAGAGCTACCGGGAGAACCTGGAGCGGGTGTT 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCCTGCCTCTGGGATCTCTCCAGATATGGTCGCTGCTCAATGGAGAGCTACCGGGAGAACCTGGAGCGGGTGTT 962
Query 495 TGTGCGCATGGACCAAGTATTGCCAGACTCCTGCCTGCTGGTGTGGAACATGGCGATGCCCCTCGGGGAACGTA 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGTGCGCATGGACCAAGTATTGCCAGACTCCTGCCTGCTGGTGTGGAACATGGCGATGCCCCTCGGGGAACGTA 1036
Query 569 TCACTGGGGGTTTCCTCCTGCCAGAGCTCCAGCCCCTGGCAGGCTCCCTGCGGCGGGATGTGGTTGAAGGGAAC 642
|||||||||||||||||||||||||
Sbjct 1037 TCACTGGGGGTTTCCTCCTGCCAGA------------------------------------------------- 1061
Query 643 TTCTACAGTGCTACGCTGGCCGGGGACCACTGCTTTGATGTCCTAGACCTCCACTTTCACTTCCGGCATGCAGT 716
Sbjct 1062 -------------------------------------------------------------------------- 1061
Query 717 ACAGCACCGTCATCGGGATGGTGTCCACTGGGACCAGCATGCACACCGCCACCTCTCACACCTGCTTCTGACCC 790
Sbjct 1062 -------------------------------------------------------------------------- 1061
Query 791 ATGTGGCTGACGCCTGGGGCGTGGAGCTGCCCAAGCGTGGCTATCCCCCTGACCCGTGGATTGAGGACTGGGCA 864
||||||||||||||||||||||||
Sbjct 1062 --------------------------------------------------GACCCGTGGATTGAGGACTGGGCA 1085
Query 865 GAGATGAATCATCCATTCCAGGGAAGCCATAGGCAGACCCCAGACTTCGGGGAGCACCTGGCCTTGCTCCCACC 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 GAGATGAATCATCCATTCCAGGGAAGCCATAGGCAGACCCCAGACTTCGGGGAGCACCTGGCCTTGCTCCCACC 1159
Query 939 CCCACCTTCTTCTTTGCCTCCTCCCATGCCTTTTCCCTACCCGCTTCCTCAGCCCTCGCCACCTCCCCTCTTCC 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1160 CCCACCTTCTTCTTTGCCTCCTCCCATGCCTTTTCCCTACCCGCTTCCTCAGCCCTCGCCACCTCCCCTCTTCC 1233
Query 1013 CACCCCTGCCCCAGGATACCCCTTTTTTCCCAGGCCAGCCCTTCCCACCCCATGAATTCTTCAACTATAATCCA 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1234 CACCCCTGCCCCAGGATACCCCTTTTTTCCCAGGCCAGCCCTTCCCACCCCATGAATTCTTCAACTATAATCCA 1307
Query 1087 GTGGAGGACTTCTCGATGCCACCCCACTTAGGATGTGGCCCTGGAGTGAACTTTGTGCCTGGCCCTCTGCCACC 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1308 GTGGAGGACTTCTCGATGCCACCCCACTTAGGATGTGGCCCTGGAGTGAACTTTGTGCCTGGCCCTCTGCCACC 1381
Query 1161 TCCAATCCCTGGCCCTAATCCCCATGGTCAGCACTGGGGCCCAGTGGTCCACCGGGGGATGCCACGCTATGTTC 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382 TCCAATCCCTGGCCCTAATCCCCATGGTCAGCACTGGGGCCCAGTGGTCCACCGGGGGATGCCACGCTATGTTC 1455
Query 1235 CTAACAGCCCCTACCATGTGCGGAGAATGGGGGGGCCCTGCAGGCAGCGGCTCAGACACTCAGAGAGACTGATC 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1456 CTAACAGCCCCTACCATGTGCGGAGAATGGGGGGGCCCTGCAGGCAGCGGCTCAGACACTCAGAGAGACTGATC 1529
Query 1309 CACACATACAAACTGGACAGACGGCCTCCTGCCCATTCGGGGACATGGCCTGGG-------------------- 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1530 CACACATACAAACTGGACAGACGGCCTCCTGCCCATTCGGGGACATGGCCTGGGTAGACTGGATCTTGGGCTGG 1603
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 1604 GACTGGATGTGCCAATGGCCCTTCAGGGCCTGCCTGGCACCTCAGGTACTGGGCTAGGGTGTCTGCTATGCCTG 1677
Query 1363 ------------------------------------------------- 1362
Sbjct 1678 GTATTGTTCTTGTCCATTGCTGTCACCAATAAAGGCATGGAAGAACAGA 1726
