Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03986
- Subject:
- NM_001282718.2
- Aligned Length:
- 3511
- Identities:
- 403
- Gaps:
- 3071
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTTCCCCGTTGCAAAGAGCTGTGGGAGATACCAAGAGGGCCTTGTCTGCATCTTCTAGTTCCTCTGCCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTACCCTTTGATGACAGGGACTCAAACCATACCTCAGAGGGGAATGGCGACTCTTTGTTAGCTGATGAAGACA 148
Query 1 -----------------ATGAGTGGC--TG-------GATAGCTACAAGCAA---GACCA-------------- 31
.|||.|.|| || ||.||| ||||| |||||
Sbjct 149 CTGACTTTGAAGACAGCTTGAATCGCAATGTGAAGAAGAGAGC----AGCAAAACGACCACCGAAAACAACACC 218
Query 32 GGATGCA----------------GGATTTCTGGAGCTTGTTAACTTTTTCAT---------------------- 67
||..||| || ||..||| |.|| ||.|..||||
Sbjct 219 GGTGGCAAAACATCCAAAGAAAGGG---TCCCGAG-TGGT--ACATCGTCATAGCCGGAAACAGTCAGAGCCAC 286
Query 68 ------CTGATCTTGTGGATG------------------------TAAAGGACTCGGGGGACTATCCTCTGACA 111
.|||||||.|..||| |..||||||||||||||||.|||||.|.|
Sbjct 287 CAGCCAATGATCTTTTCAATGCTGTGAAAGCCGCCAAAAGTGACATGCAGGACTCGGGGGACTACCCTCTCATA 360
Query 112 GCTCCAGGTCTATCCTGGAAGAAGTTCCAGGGCAGCTTCTGTGAGTTTGTGGGGACATTGGTCTGTCGGTGCCA 185
||||||||||.|||||||||||||||||||||||||||||||||.||||||.|||||||||||||||.||||||
Sbjct 361 GCTCCAGGTCCATCCTGGAAGAAGTTCCAGGGCAGCTTCTGTGAATTTGTGAGGACATTGGTCTGTCAGTGCCA 434
Query 186 GTACATCCTCCTCCATGATGACTTCCCTATGGACAACCTCATCTCCCTGCTCACTGGCTTCTCAGACTCACAAG 259
|||||.|||||||.||||||.|||||||||||||.|||||||||||||||||||||||.|||||||||||||||
Sbjct 435 GTACAGCCTCCTCTATGATGGCTTCCCTATGGACGACCTCATCTCCCTGCTCACTGGCCTCTCAGACTCACAAG 508
Query 260 TCTGCGCCTTCTGTCACACTAGCACCCTGGCTGCTATGAAACTGATGACCTCCCTGGTAAGAGTTGCCCTCCAA 333
||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 509 TCCGCGCCTTCCGTCACACTAGCACCCTGGCTGCTATGAAACTGATGACCTCCCTGGTAAAAGTTGCCCTCCAA 582
Query 334 CTGAGTCTGCACGAAGATATCAATCAGCGTCAGTATGAGGCTGAAAGAAACAAGGGGCCAGGGCAGAGGGCACC 407
||||||.|||||.||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 583 CTGAGTGTGCACCAAGATAACAATCAGCGTCAGTATGAGGCTGAAAGAAACAAGGGGCCAGGGCAGAGGGCACC 656
Query 408 TGAGCGGCTGGAGAGCCTGTTGGAGAAACACAAAGAGCT------GCAT------------------------- 450
|||||||||||||||||||||||||||||.||||||||| ||||
Sbjct 657 TGAGCGGCTGGAGAGCCTGTTGGAGAAACGCAAAGAGCTCCAAGAGCATCAAGAGGAGATTGAGGGGATGATGA 730
Query 451 -------------------------------------------------------------------------- 450
Sbjct 731 ATGCCCTCTTCAGGGGTGTCTTTGTTCATCGGTACAGGGATGTCCTTCCTGAGATCCGTGCTATCTGCATTGAG 804
Query 451 -------------------------------------------------------------------------- 450
Sbjct 805 GAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACCGACAGCTATTTAAAATATATTGGTTGGAC 878
Query 451 -------------------------------------------------------------------------- 450
Sbjct 879 TCTGCATGATAAGCACCGAGAAGTCCGCCTGAAGTGTGTGAAGGCCCTGAAAGGGCTGTACGGTAACCGGGACC 952
Query 451 -------------------------------------------------------------------------- 450
Sbjct 953 TGACCACACGCCTGGAGCTCTTCACCAGCCGCTTCAAGGACCGGATGGTTTCCATGGTCATGGACAGAGAGTAT 1026
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1027 GATGTGGCAGTGGAGGCTGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGACGGACGCGGA 1100
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1101 TTGTGAGAGCGTCTACCCAGTTGTGTATGCCTCTCATCGAGGCCTGGCCTCTGCCGCAGGCGAATTTCTGTACT 1174
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1175 GGAAACTCTTCTACCCTGAGTGCGAGATAAGAATGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGCGCCCAG 1248
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1249 AGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCGAGCTCCATGACCACGCTGCTTACTTAGTAGA 1322
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1323 CAGTCTGTGGGACTGTGCAGGGGCTCGGCTGAAGGACTGGGAGGGTCTGACAAGCCTGCTGCTGGAGAAGGACC 1396
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1397 AGAACCTGGGTGATGTGCAGGAGAGCACACTGATAGAAATCCTTGTGTCCAGTGCCCGGCAAGCTTCAGAGGGG 1470
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1471 CACCCGCCTGTGGGCCGGGTCACTGGGAGGAAGGGCTTAACCTCTAAGGAGCGCAAGACCCAAGCCGATGACAG 1544
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1545 GGTGAAGTTGACTGAGCACCTCATCCCCCTGCTGCCCCAGCTCCTGGCCAAGTTCTCAGCTGATGCAGAGAAGG 1618
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1619 TCACTCCCCTGCTCCAGCTTCTCAGCTGCTTTGACCTCCACATCTACTGCACTGGGCGCTTGGAGAAGCACCTG 1692
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1693 GAGCTGTTCCTGCAGCAACTCCAGGAGGTGGTGGTGAAGCATGCAGAGCCAGCGGTGCTTGAGGCTGGGGCGCA 1766
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1767 TGCCCTCTACCTGCTCTGTAATCCCGAATTCACTTTCTTCAGCCGGGCGGACTTTGCCCGCAGCCAGCTAGTAG 1840
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1841 ATTTGCTGACTGACCGCTTCCAGCAGGAGCTTGAAGAGCTGTTACAGTCGTCCTTCCTAGATGAGGATGAGGTA 1914
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1915 TATAATCTGGCAGCCACTCTGAAACGCCTCTCTGCCTTCTACAACACTCATGACCTGACTCGCTGGGAGCTCTA 1988
Query 451 -------------------------------------------------------------------------- 450
Sbjct 1989 TGAGCCATGTTGCCAACTCCTGCAGAAGGCTGTGGACACAGGAGAGGTTCCTCACCAGGTTATCCTGCCAGCCT 2062
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2063 TGACTCTTGTCTATTTTTCCATTCTCTGGACACTAACCCACATTTCTAAATCAGATGCTTCCCAGAAGCAGCTG 2136
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2137 TCGAGTTTGAGGGACAGAATGGTGGCCTTCTGTGAACTCTGCCAGAGTTGCCTCTCAGATGTGGATACTGAGAT 2210
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2211 CCAGGAGCAGGCTTTTGTCTTATTAAGTGATCTACTTCTCATCTTTAGCCCTCAGATGATTGTTGGGGGCCGTG 2284
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2285 ATTTCCTTAGGCCACTTGTCTTTTTTCCTGAAGCTACTCTCCAGTCTGAGCTAGCCAGCTTCCTCATGGACCAC 2358
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2359 GTCTTCATCCAGCCGGGAGACCTGGGCAGTGGTGATTCCCAGGAGGATCATTTACAGATAGAGCGGCTACACCA 2432
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2433 GCGGCGCCGCCTCCTAGCCGGGTTCTGCAAGCTGTTGCTTTATGGGGTGCTGGAGATGGATGCAGCCTCAGATG 2506
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2507 TTTTCAAACACTACAACAAGTTCTACAATGACTATGGTGACATTATCAAGGAAACATTAACTAGAGCAAGGCAG 2580
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2581 ATTGACCGAAGTCATTGTTCCCGAATCCTGCTGCTGAGCCTCAAGCAGCTGTACACAGAACTGCTGCAGGAGCA 2654
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2655 TGGGCCCCAGGGCCTGAATGAGCTTCCTGCCTTCATCGAGATGAGGGACCTGGCCCGGAGGTTTGCCTTGAGTT 2728
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2729 TTGGACCCCAGCAGCTGCAGAACCGTGACCTCGTGGTCATGCTACACAAGGAAGGCATCCAGTTCTCCTTGTCT 2802
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2803 GAGCTTCCTCCAGCTGGCTCCTCCAATCAGCCTCCAAATCTGGCATTCCTGGAGCTCCTTTCAGAGTTTTCCCC 2876
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2877 CCGACTCTTCCATCAGGACAAGCAGCTTTTACTGTCCTATCTAGAAAAGTGCCTGCAGCATGTCTCCCAGGCAC 2950
Query 451 -------------------------------------------------------------------------- 450
Sbjct 2951 CTGGCCATCCCTGGGGCCCAGTCACCACCTACTGCCACTCCCTCAGCCCTGTGGAGAACACAGCAGAGACCAGC 3024
Query 451 -------------------------------------------------------------------------- 450
Sbjct 3025 CCTCAGGTCCTCCCCAGCTCCAAGAGGAGGCGCGTTGAAGGGCCTGCCAAGCCTAACAGAGAGGACGTCTCCTC 3098
Query 451 -------------------------------------------------------------------------- 450
Sbjct 3099 GTCCCAGGAAGAAAGTCTGCAGCTGAACAGCATCCCGCCCACGCCCACCCTCACCTCCACAGCTGTGAAGAGCA 3172
Query 451 -------------------------------------------------------------------------- 450
Sbjct 3173 GGCAGCCCCTGTGGGGGTTGAAAGAGATGGAGGAAGAAGATGGCTCAGAGTTGGATTTTGCCCAGGGTCAGCCC 3246
Query 451 -------------------------------------------------------------------------- 450
Sbjct 3247 GTCGCAGGCACCGAGAGGTCAAGGTTCTTGGGTCCACAATATTTCCAGACTCCACACAACCCTTCAGGTCCTGG 3320
Query 451 -------------------------------------------------------------------------- 450
Sbjct 3321 CCTGGGCAACCAGCTGATGCGACTCAGCCTTATGGAAGAGGACGAGGAAGAAGAGTTAGAAATCCAGGATGAGT 3394
Query 451 -------------------------------------------------------------------------- 450
Sbjct 3395 CAAATGAAGAACGGCAGGATACAGACATGCAAGCAAGTAGCTACTCTTCCACCAGTGAGCGCGGGCTGGACCTC 3468
Query 451 --------------------------------- 450
Sbjct 3469 TTAGATTCTACAGAGCTGGATATTGAGGATTTC 3501
