Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04145
• Subject: XM_006516333.2
• Aligned Length: 1322
• Identities: 811
• Gaps: 406

Alignment

Query    1  ATGAGAATGTCTTCAAAGTTTCCATCACCACCTCTACCAATTTTTCTTCCACCGGAGCCAGTGGACTTAGGTTC  74
            ||||.|||||||||||.||||.||||||||.||||||||.||||.||..||||.|||||||..||||||||.||
Sbjct    1  ATGAAAATGTCTTCAAGGTTTTCATCACCATCTCTACCAGTTTTCCTCTCACCAGAGCCAGCTGACTTAGGCTC  74

Query   75  CATAACAAGCTCCTCTTGTTCACTGAATGAGCTAGACAATATTTCCCACCTTTTAAGGAAAATATCAGCTGATA  148
            ..|.|||||..|.|||||||||||.||||||||.|.||||||||||.|||||||.|||||||||.||.||||||
Sbjct   75  TCTGACAAGTGCTTCTTGTTCACTAAATGAGCTGGGCAATATTTCCTACCTTTTGAGGAAAATAGCAACTGATA  148

Query  149  TCAATGAAATTAAAGGAATGAAAGCAGCTATTTTGACAGTGGAAGCAAATCTTTTTGATCTAAATGTTAGAGTG  222
            ||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||.|.||||||||||||
Sbjct  149  TCAATGAAATGAAAGGAATGAAAGCAGCTATTTTGACAGTGGAAGCAAATCTTTTTGATTTGAATGTTAGAGTG  222

Query  223  TCCAAGAATGAAGCAAAAATTTCATCTTTGGAGGTTAAAATGAATGAATATT---CAACAACATATGAATGCAA  293
            |||.||||.||||||||||||||||||||.||||||||||||||||||||||   ||.||||||.|||||||||
Sbjct  223  TCCCAGAACGAAGCAAAAATTTCATCTTTAGAGGTTAAAATGAATGAATATTTAACATCAACATCTGAATGCAA  296

Query  294  CAGACAGTTTGAAGA---TCAAGA-AGA--AGATACTGAATCACAGTCAAGA-ACTACTGATGTAAAAATAATC  360
            |||||||||.|||||   |||||| |||  |||...|||.|||||||| ||| ||||||||||.|||..||||.
Sbjct  297  CAGACAGTTGGAAGATTTTCAAGAGAGACTAGAATTTGAGTCACAGTC-AGAGACTACTGATGCAAACCTAATT  369

Query  361  GGCTTCCTTAGAAACGTTGAGAAAGGAACTCAACAGAGGCAATTATTATCCCGACTGCAAATCGACCCAGTAAT  434
            ||||||||.|.|.|.|||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||
Sbjct  370  GGCTTCCTAACAGAGGTTGAGAAAGGAACTCAACAGAGGCAATTGTTATCCCGACTGCAAATTGATCCAGTAAT  443

Query  435  GGCAGAAACTCTGCAGATGAGTCAA-------------------------------------------------  459
            ||.||||||..||.|||||||||||                                                 
Sbjct  444  GGTAGAAACAATGGAGATGAGTCAAGATTACTATGACATGGAATCCATGGTCCATGCAGACACAAGATCATTTA  517

Query  460  --------------------------------------------------------------------------  459
                                                                                      
Sbjct  518  TTCTGAAGAAGCCAAAGCTGTCTGAGGAAATAGTAGTGACACCCAACCAGGATTCGGGGATGAAGACTGCAGAT  591

Query  460  --------------------------------------------------------------------------  459
                                                                                      
Sbjct  592  GCCCTTCGGGTCCTTTCAGGACACCTTATGCAGACACGAGATCTTGTACAACCAGATAAACCTGCAAGTCCCAA  665

Query  460  --------------------------------------------------------------------------  459
                                                                                      
Sbjct  666  GTTTATAGTGACGCTGGATGGTGTCCCCAGCCCCCCAGGATACATGTCAGATCAAGAGGAGGAGATGTGCTTTG  739

Query  460  --------------------------------------------------------------------------  459
                                                                                      
Sbjct  740  AAGGAATGAAACCCGTAAACCAAACTTCAGCCTCAAACAAGGGACTCAGAGGTCTCCTCCACCCACAGCAGTTG  813

Query  460  ------------------------------------------------GCTGAGATGAGTGAACTGAGTGTGGC  485
                                                            ||.|||||||.|||.|||||||||||
Sbjct  814  CATTTGCTGAGCAGGCAGCTTGAGGACCCAGATGGTAGCTTTTCCAACGCCGAGATGACTGACCTGAGTGTGGC  887

Query  486  ACAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAATGGGGATGAGTGTGCCTACC  559
            |||||||||||||||||||.|||||||||||||||||||||||||.||||||||||||||||||||||..||||
Sbjct  888  ACAGAAACCAGAAAAACTTCTGGAGCGCTGCAAGTACTGGCCTGCCTGTAAAAATGGGGATGAGTGTGTATACC  961

Query  560  ATCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATGTTTGTTTGTTCACCCAAAT  633
            ||||.|||||.|||||.|||||||||||.|||||.||||||||||||||.||||||||||||||.||.||||||
Sbjct  962  ATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTTTGTTTGTGCATCCAAAT  1035

Query  634  TGTAAATATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCATGTGAGTAGAAGA-ATTCCAGTACTGT  706
            |||||||||||..||||||||||||||.|||||||||||||||||||..||||||||||| ..||.| |||||.
Sbjct 1036  TGTAAATATGACACAAAGTGTACTAAAGCAGATTGTCCCTTCACTCACATGAGTAGAAGAGCCTCGA-TACTGA  1108

Query  707  CTCCAAAACCAGTTGCACCACCAGCACCACCTTCCAGTAGTCAGCTCTGCCGTTACTTCCCTGCTTGTAAGAAG  780
            |||||||||||||..|..||||||||||..||||.|.|.|.||||||||||||||||||||||||||||||||.
Sbjct 1109  CTCCAAAACCAGTGTCGTCACCAGCACCGTCTTCTAATGGCCAGCTCTGCCGTTACTTCCCTGCTTGTAAGAAA  1182

Query  781  ATGGAATGTCCCTTCTATCATCCAAAACATTGTAGGTTTAACACTCAATGTACAAGACCGGACTGCACATTCTA  854
            |||||||||||||||||.||.||||||||.|||||||||||||||||.|||||.|||||.|||||||||||.||
Sbjct 1183  ATGGAATGTCCCTTCTACCACCCAAAACACTGTAGGTTTAACACTCAGTGTACGAGACCTGACTGCACATTTTA  1256

Query  855  CCATCCCACCATTAATGTCCCACCACGACATGCCTTGAAATGGATTCGACCTCAAACCAGCGAA  918
            .||.||||||||||.|||.||||||.||||.|||||||||||||||||||||||.|.|||.||.
Sbjct 1257  TCACCCCACCATTACTGTGCCACCAAGACACGCCTTGAAATGGATTCGACCTCAGAGCAGTGAG  1320