Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04150
Subject:
NM_001261394.1
Aligned Length:
2064
Identities:
1914
Gaps:
150

Alignment

Query    1  ATGCAGGTCTCCAGCCTCAATGAGGTGAAGATTTACAGCCTCAGCTGCGGCAAGTCCCTTCCTGAGTGGCTTTC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCAGGTCTCCAGCCTCAATGAGGTGAAGATTTACAGCCTCAGCTGCGGCAAGTCCCTTCCTGAGTGGCTTTC  74

Query   75  TGATAGGAAGAAGAGAGCGCTACAGAAGAAAGATGTAGATGTCCGTAGGAGAATTGAACTTATTCAGGACTTTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGATAGGAAGAAGAGAGCGCTACAGAAGAAAGATGTAGATGTCCGTAGGAGAATTGAACTTATTCAGGACTTTG  148

Query  149  AAATGCCTACTGTGTGTACCACTATTAAGGTGTCAAAAGATGGACAGTACATTTTAGCAACTGGAACATATAAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AAATGCCTACTGTGTGTACCACTATTAAGGTGTCAAAAGATGGACAGTACATTTTAGCAACTGGAACATATAAA  222

Query  223  CCTCGGGTTCGATGTTATGACACCTATCAATTATCCTTGAAGTTTGAAAGGTGTTTAGATTCAGAAGTTGTCAC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTCGGGTTCGATGTTATGACACCTATCAATTATCCTTGAAGTTTGAAAGGTGTTTAGATTCAGAAGTTGTCAC  296

Query  297  CTTTGAAATTTTGTCTGATGACTACTCAAAGATTGTCTTCTTACATAATGATAGATACATTGAATTTCATTCGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTTTGAAATTTTGTCTGATGACTACTCAAAGATTGTCTTCTTACATAATGATAGATACATTGAATTTCATTCGC  370

Query  371  AATCAGGTTTTTACTACAAAACCAGAATACCAAAGTTTGGGAGAGATTTCTCTTACCACTATCCATCCTGTGAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATCAGGTTTTTACTACAAAACCAGAATACCAAAGTTTGGGAGAGATTTCTCTTACCACTATCCATCCTGTGAC  444

Query  445  TTGTACTTTGTTGGTGCAAGTTCTGAAGTTTATAGGTTAAACTTAGAACAAGGACGATACCTGAATCCTCTACA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTGTACTTTGTTGGTGCAAGTTCTGAAGTTTATAGGTTAAACTTAGAACAAGGACGATACCTGAATCCTCTACA  518

Query  519  AACTGATGCTGCGGAGAATAATGTTTGTGACATAAATTCAGTGCATGGCTTGTTTGCCACAGGAACCATAGAGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AACTGATGCTGCGGAGAATAATGTTTGTGACATAAATTCAGTGCATGGCTTGTTTGCCACAGGAACCATAGAGG  592

Query  593  GTAGAGTGGAGTGCTGGGACCCAAGAACTCGAAACAGAGTTGGCCTGTTAGACTGCGCCTTAAACAGTGTCACA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTAGAGTGGAGTGCTGGGACCCAAGAACTCGAAACAGAGTTGGCCTGTTAGACTGCGCCTTAAACAGTGTCACA  666

Query  667  GCAGATTCAGAGATAAACAGTTTACCAACAATCTCTGCTTTGAAATTTAATGGTGCCTTGACCATGGCAGTTGG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCAGATTCAGAGATAAACAGTTTACCAACAATCTCTGCTTTGAAATTTAATGGTGCCTTGACCATGGCAGTTGG  740

Query  741  AACAACCACAGGGCAGGTTTTATTATATGACCTTCGATCTGATAAGCCATTGCTAGTTAAAGATCACCAGTATG  814
            ||||||||||||||||                                                          
Sbjct  741  AACAACCACAGGGCAG----------------------------------------------------------  756

Query  815  GGCTGCCCATTAAGTCCGTTCATTTCCAGGATTCATTAGATCTGATTTTGTCTGCTGACTCTCGAATTGTCAAG  888
                                                                                      
Sbjct  757  --------------------------------------------------------------------------  756

Query  889  ATGTGGAATAAGAACTCCGGAAAAATATTTACTTCCTTGGAGCCAGAGCATGACCTTAATGATGTTTGTCTCTA  962
                              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  757  ------------------GGAAAAATATTTACTTCCTTGGAGCCAGAGCATGACCTTAATGATGTTTGTCTCTA  812

Query  963  CCCCAACTCAGGCATGCTTCTGACGGCCAATGAAACCCCCAAGATGGGCATCTATTACATTCCAGTTTTGGGTC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  813  CCCCAACTCAGGCATGCTTCTGACGGCCAATGAAACCCCCAAGATGGGCATCTATTACATTCCAGTTTTGGGTC  886

Query 1037  CTGCTCCTCGGTGGTGTTCCTTCTTAGACAACTTGACCGAAGAATTAGAAGAGAATCCAGAAAGCACAGTCTAT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  887  CTGCTCCTCGGTGGTGTTCCTTCTTAGACAACTTGACCGAAGAATTAGAAGAGAATCCAGAAAGCACAGTCTAT  960

Query 1111  GATGATTATAAATTTGTCACCAAGAAAGACCTTGAAAATTTAGGGCTCACCCACCTCATTGGATCTCCTTTCCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  961  GATGATTATAAATTTGTCACCAAGAAAGACCTTGAAAATTTAGGGCTCACCCACCTCATTGGATCTCCTTTCCT  1034

Query 1185  CCGGGCATATATGCATGGGTTTTTCATGGATATAAGACTCTATCACAAGGTGAAACTGATGGTAAATCCATTTG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035  CCGGGCATATATGCATGGGTTTTTCATGGATATAAGACTCTATCACAAGGTGAAACTGATGGTAAATCCATTTG  1108

Query 1259  CTTATGAAGAATATAGGAAAGATAAAATACGACAGAAAATAGAAGAAACACGTGCACAGAGAGTCCAGTTAAAG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109  CTTATGAAGAATATAGGAAAGATAAAATACGACAGAAAATAGAAGAAACACGTGCACAGAGAGTCCAGTTAAAG  1182

Query 1333  AAATTGCCAAAAGTTAACAAAGAGCTGGCACTTAAATTAATTGAGGAAGAAGAGGAGAAGCAGAAATCTACATG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183  AAATTGCCAAAAGTTAACAAAGAGCTGGCACTTAAATTAATTGAGGAAGAAGAGGAGAAGCAGAAATCTACATG  1256

Query 1407  GAAAAAGAAAGTTAAGAGTCTTCCTAATATTCTCACCGATGATCGATTTAAAGTTATGTTTGAGAACCCTGACT  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257  GAAAAAGAAAGTTAAGAGTCTTCCTAATATTCTCACCGATGATCGATTTAAAGTTATGTTTGAGAACCCTGACT  1330

Query 1481  TCCAAGTAGATGAAGAGAGTGAAGAATTTAGGCTTCTGAATCCACTTGTTTCAAAAATTAGTGAAAAAAGGAAG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331  TCCAAGTAGATGAAGAGAGTGAAGAATTTAGGCTTCTGAATCCACTTGTTTCAAAAATTAGTGAAAAAAGGAAG  1404

Query 1555  AAGAAACTAAGACTCTTAGAGCAACAAGAACTTCGTGAAAAAGAAGAGGAGGAAGAGCCGGAAGGAAAACCAAG  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405  AAGAAACTAAGACTCTTAGAGCAACAAGAACTTCGTGAAAAAGAAGAGGAGGAAGAGCCGGAAGGAAAACCAAG  1478

Query 1629  TGATGCAGAAAGTTCGGAGAGTTCAGATGATGAAAAAGCCTGGGTTGAAGAGGTCAGGAAGCAACGCAGACTCC  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1479  TGATGCAGAAAGTTCGGAGAGTTCAGATGATGAAAAAGCCTGGGTTGAAGAGGTCAGGAAGCAACGCAGACTCC  1552

Query 1703  TCCAGCAGGAGGAAAAAGTGAAGCGGCAGGAACGACTCAAGGAGGACCAGCAGACAGTCCTAAAGCCCCAGTTT  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1553  TCCAGCAGGAGGAAAAAGTGAAGCGGCAGGAACGACTCAAGGAGGACCAGCAGACAGTCCTAAAGCCCCAGTTT  1626

Query 1777  TATGAGATCAAAGCAGGAGAAGAATTTAGAAGCTTCAAAGATTCTGCCACAAAGCAGAAACTGATGAACAAAAC  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1627  TATGAGATCAAAGCAGGAGAAGAATTTAGAAGCTTCAAAGATTCTGCCACAAAGCAGAAACTGATGAACAAAAC  1700

Query 1851  CCTTGAAGATCGTTTGAAAATTGAAGCAAAAAATGGGACATTGAGTGTATCCGACACCACCGTTGGCAGCAAAC  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1701  CCTTGAAGATCGTTTGAAAATTGAAGCAAAAAATGGGACATTGAGTGTATCCGACACCACCGTTGGCAGCAAAC  1774

Query 1925  AATTGACATTCACGTTAAAGAGGTCTGAACAGCAGAAGAAGCAACAGGAGGCTGAGAAACTGCATCGACAAGAA  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1775  AATTGACATTCACGTTAAAGAGGTCTGAACAGCAGAAGAAGCAACAGGAGGCTGAGAAACTGCATCGACAAGAA  1848

Query 1999  AGGAAAAGACTCCGTCGTTCGGCCGGACACCTGAAGTCAAGACACAAAAGAGGACGGTCGTTTCAT  2064
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1849  AGGAAAAGACTCCGTCGTTCGGCCGGACACCTGAAGTCAAGACACAAAAGAGGACGGTCGTTTCAT  1914

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