Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04153
- Subject:
- NM_001130186.1
- Aligned Length:
- 2503
- Identities:
- 1386
- Gaps:
- 977
Alignment
Query 1 ATGAAACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACGACAATGGCAGCCTGTCAACTACTTGGTCCCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.||.||||||||
Sbjct 1 ATGAAACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACGACAATGGCAGCTTGTCAACGACATGGTCCCA 74
Query 75 GAATTCCCGATCCCAGCAT---AGGAGAAGCTCCTGCTCCAGACATGAAGATCGAAAGCCTTCAGAGGTGTTTA 145
|.||||.|||||||||||| |||||.||..|||||||.||||.||||||||||||||||||.||||||||||
Sbjct 75 GCATTCTCGATCCCAGCATGGGAGGAGTAGTACCTGCTCTAGACCTGAAGATCGAAAGCCTTCTGAGGTGTTTA 148
Query 146 GGACAGACCTGATCACTGCCATGAAGTTGCATGACTCCTACCAGCTGAATCCGGATGAGTACTATGTGTTGGCA 219
||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||.|||.||||.
Sbjct 149 GGACCGACCTGATCACTGCCATGAAGTTGCATGACTCCTACCAGCTGAACCCGGATGACTACTACGTGCTGGCT 222
Query 220 GATCCCTGGAGACAGGAATGGGAGAAAGGGGTCCAGGTGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGGC 293
|||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||
Sbjct 223 GATCCCTGGAGACAGGAGTGGGAGAAAGGGGTCCAGGTGCCTGTGAGCCCAGGGACCATCCCACAGCCTGTGGC 296
Query 294 CAGGGTTGTGTCTGAAGAGAAATCCCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTCATCAGGCTCTGAGC 367
|||||||||||||||||||||.||.|||||||||||||||||||||||||||||||.|||.||.||||||||||
Sbjct 297 CAGGGTTGTGTCTGAAGAGAAGTCTCTCATGTTCATCAGGCCCAAGAAGTACATCGCGTCGTCCGGCTCTGAGC 370
Query 368 CTCCCGAGTTGGGCTATGTGGACATCCGGACGCTGGCTGACAGCGTGTGTCGCTATGACCTCAATGACATGGAT 441
|.||.|.|||.|||||.||.||.||||||||.|||||.|||||.||||||||.||||||||||||||.||||||
Sbjct 371 CCCCAGCGTTAGGCTACGTCGATATCCGGACTCTGGCAGACAGTGTGTGTCGGTATGACCTCAATGATATGGAT 444
Query 442 GCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATGGGAATGCCTGAACTAGATGAATACACCATGGA 515
|||||.|||||||||.|.||||||||||||||||||||||||||.|||||.||.||.||.||.|||||||||||
Sbjct 445 GCTGCGTGGCTGGAAGTAACCAATGAAGAATTTAAGGAGATGGGGATGCCGGAGCTGGACGAGTACACCATGGA 518
Query 516 GAGGGTCCTAGAGGAATTTGAGCAGCGATGCTACGACAATATGAATCATGCCATAGAGACTGAGGAAGGCCTGG 589
.||||||.|.||||||||.||.|||||||||||.||||||||||||||||||||||||||.||.||.|||.|||
Sbjct 519 AAGGGTCTTGGAGGAATTCGAACAGCGATGCTATGACAATATGAATCATGCCATAGAGACAGAAGAGGGCTTGG 592
Query 590 GGATCGAATATGATGAAGATGTTGTCTGTGATGTCTGCCAGTCTCCTGATGGTGAGGACGGCAATGAGATGGTG 663
||||.|||||.||.|||||.||||||||.||||||||||||||.||||||||.|||||||||||.|||||||||
Sbjct 593 GGATTGAATACGACGAAGACGTTGTCTGCGATGTCTGCCAGTCACCTGATGGCGAGGACGGCAACGAGATGGTG 666
Query 664 TTCTGTGACAAATGCAACATCTGTGTGCACCAGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCAGCTGGCT 737
|||||||||||.||.||||||||||||||||||||.||.|||||.|||||||||||.|||||||||||.|||||
Sbjct 667 TTCTGTGACAAGTGTAACATCTGTGTGCACCAGGCTTGCTATGGGATCCTCAAGGTGCCAGAGGGCAGTTGGCT 740
Query 738 GTGCCGGACATGTGCCCTGGGGGTTCAGCCAAAATGTCTGCTGTGTCCGAAGAAGGGTGGAGCTATGAAGCCCA 811
.||.||.||||||||||||||.|||||||||||||||.||||||||||.|||||.||.||||||||||||||.|
Sbjct 741 ATGTCGTACATGTGCCCTGGGAGTTCAGCCAAAATGTTTGCTGTGTCCCAAGAAAGGCGGAGCTATGAAGCCGA 814
Query 812 CCCGTAGCGGAACCAAGTGGGTCCACGTTAGCTGTGCTCTGTGGATCCCTGAGGTGAGCATTGGCAGCCCAGAG 885
||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||||||||.|||
Sbjct 815 CCCGCAGCGGAACCAAGTGGGTCCACGTCAGCTGTGCCCTGTGGATCCCTGAGGTAAGCATTGGCAGCCCTGAG 888
Query 886 AAGATGGAGCCCATCACCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGA 959
|||||||||||||||||.||.|||||.||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 889 AAGATGGAGCCCATCACAAAAGTGTCTCACATTCCCAGCAGCCGGTGGGCGCTTGTGTGCAGCCTCTGCAATGA 962
Query 960 GAAGTTTGGGGCCTCTATACAGTGCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTTTGACC 1033
|||.||.||||||||.||||||||||||||||||||||||||.|||||||||||.|||||.|||||||||||||
Sbjct 963 GAAATTCGGGGCCTCCATACAGTGCTCTGTGAAGAACTGCCGGACAGCCTTCCACGTGACTTGTGCTTTTGACC 1036
Query 1034 GGGGCCTGGAGATGAAGACCATCTTAGCAGAGAATGATGAAGTCAAGTTCAAGTCCTATTGCCCAAAGCACAGC 1107
|.||||||||||||||||||||.||.||||||||||||||||||||.|||||||||||.|||||||||||||||
Sbjct 1037 GTGGCCTGGAGATGAAGACCATATTGGCAGAGAATGATGAAGTCAAATTCAAGTCCTACTGCCCAAAGCACAGC 1110
Query 1108 TCACATAGGAAACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGGAGAATGGGGCCCCTGAGTGTTCCCCCCG 1181
|||||.|||||||||||||||.|.||.||..|.||.||.||.|||||||||||||||||||||.||||.||||.
Sbjct 1111 TCACACAGGAAACCCGAGGAGGGCCTGGGTGAAGGAGCAGCCCAGGAGAATGGGGCCCCTGAGAGTTCTCCCCA 1184
Query 1182 GAATCCGCTGGAGCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGCCCACCGGGTGAGTGTCCGTAAGCAGA 1255
||..||.||||||||||.||..||.||.||||.|||.||.|||||||||||||||||||||||.||.|||||||
Sbjct 1185 GAGCCCTCTGGAGCCCTATGGTAGTCTGGAGCCGAATCGAGAGGAGGCCCACCGGGTGAGTGTTCGCAAGCAGA 1258
Query 1256 AGCTGCAGCAGTTGGAGGATGAGTTCTACACCTTCGTCAACCTGCTGGATGTTGCCAGGGCTCTGCGGCTGCCT 1329
||||.||||||.||||||||||||||||||||||.|||||||||||||||||.||||||||.||||||||||||
Sbjct 1259 AGCTACAGCAGCTGGAGGATGAGTTCTACACCTTTGTCAACCTGCTGGATGTGGCCAGGGCGCTGCGGCTGCCT 1332
Query 1330 GAGGAAGTAGTGGATTTCCTGTACCAGTACTGGAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCTGATCAC 1403
||||||||.|||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.|||||
Sbjct 1333 GAGGAAGTGGTGGATTTCCTGTACCAGTACTGGAAGTTGAAGAGGAAGATCAACTTCAACAAGCCCCTCATCAC 1406
Query 1404 CCCAAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAGGAGGCTGCAGCTGTTCA 1477
||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1407 CCCAAAGAAAGACGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGTCTTGTTTAGGAGGCTGCAGCTGTTCA 1480
Query 1478 CGCACCTGCGGCAGGACCTGGAGAGGGT----AA--TGATTGACA--CTGACACC------------TTA---- 1527
|||||||||||||||||||||||||||| || |.|.|.||| .|||| || |||
Sbjct 1481 CGCACCTGCGGCAGGACCTGGAGAGGGTTCGGAACCTCACTTACATGGTGAC-CCGCAGGGAAAAGATTAAACG 1553
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1554 GTCTGTGTGCAAAGTCCAGGAACAAATTTTCACTCAGTACACTAAGCTCTTGGAGCAAGAAAAAGTTTCAGGTG 1627
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1628 TGCCTTCTTCCTGCTCCTCCGCACTGGAGAACATGCTTTTTTTCAACAGTCCTTCTGTGGGCCCCAATGCTCCC 1701
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1702 AAGATAGAGGACTTGAAATGGCATTCTGCATTCTTCAGGAAACAAATGGGCACTTCCTTGGTTCATCCACTGAA 1775
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1776 AAAGTCCCATAAACGAGATGCAGTGCAGAATAGTTCTGGGACCGAGGGCAAGACCTCGCATAAGCAGCCAGGTC 1849
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1850 TTTGTGGTAGAAGGGAGGGGCTGGAGGTCTCAGAAAGCTTGCTGAGCTTAGAAAAGACTTTTGCAGAAGCACGT 1923
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1924 CTCCTATCATCAGCACAACAGAAAAATGGTGTGGTGACCCCAGACCATGGGAAAAGAAGAGACAATCGTTTTCA 1997
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1998 TTGTGATCTCGTTAAAGGAGACTTAAAGGACAAATCTTTTAAGCAGAGTCACAAGCCTCTCAGGTCCACAGACA 2071
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2072 CATCCCAGAGGCATCTGGACAACACAAGAGCTGCCACCTCCCCTGGAGTAGGGCAGTCAGCACCTGGCACCAGG 2145
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2146 AAGGAGATTGTGCCCAAGTGCAATGGCTCCCTAGTCAAAGTGCCTATAACACCTGCCAGCCCAGTGAAAAGCTG 2219
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2220 GGGAGGATTCCGGATTCCAAAGAAGGGGGAGCGGCAGCAGCAAGGAGAAGCCCATGATGGGGCCTGCCACCAGC 2293
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2294 ACTCAGACTGCTCCCATCTGGGTGTAAGCCGAGCTCCAGCCAAGGAGAGAGCGAAGAGCAGGTTAAGAGCTGAC 2367
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2368 AGTGAGAATGATGGGTACGCCCCTGATGGGGAAATGAGTGACTCAGAGAGCGAGGCATCAGAGAAGAAATGTAT 2441
Query 1528 ------------------------------------------------------------- 1527
Sbjct 2442 CCATGCCAGCAGCACCATCAGCAGGAGGACAGATATCATCAGGCGAAGCATCTTGGCCTCT 2502
