Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04170
• Subject: NM_153501.2
• Aligned Length: 1330
• Identities: 774
• Gaps: 494

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGAGCGGGCCGGTTTGGCGCGCCTATGGAGCGCCAGGGCAGGGCTGCCGCCACCTCAGCCGCGGTCGGCGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTCTGCGGACTCGGAAGCGCGGAGGCGGGACCCGCTGAGGCGCCGGGCGAGTAGCGCGGCGCCGTCGGGGTCCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGAGGCGGAGAGTGTGAGACGGGAGCGGCCCGGCTCTCTAGGCGGCTCCACCTCGGCCGGCCGCCCGCGCGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAGGCCTCCGGAAGAGGCGGCCGCTTTTTCCATGGTTTGGCTTGGATATTGGAGGAACCTTGGTCAAGCTGGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTATTTTGAACCTAAAGACATCACTGCTGAAGAAGAAAAGGAGGAAGTGGAGAGTCTGAAAAGCATCCGGAAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACCTGACCTCCAATGTGGCTTACGGATCCACAGGCATTCGGGACGTGCACCTTGAGCTGAAGGACCTGACTCTG  444

Query    1  ------------------------------------------------ATGCCTGCTTTTATTCAAATGGGCAG  26
                                                            |||||||||||||||||.||||||||
Sbjct  445  TGTGGACGCAAAGGCAATCTGCACTTTATACGCTTTCCCACCCATGACATGCCTGCTTTTATTCAGATGGGCAG  518

Query   27  AGATAAAAACTTCTCGAGTCTCCACACTGTCTTTTGTGCCACTGGAGGTGGAGCGTACAAATTTGAGCAGGATT  100
            |||||||||||||||.||||||||||||||||||||||||||||||||||||.|.|||||||||||||||||||
Sbjct  519  AGATAAAAACTTCTCAAGTCTCCACACTGTCTTTTGTGCCACTGGAGGTGGATCATACAAATTTGAGCAGGATT  592

Query  101  TTCTCACAATAGGTGATCTTCAGCTTTGCAAACTGGATGAACTAGATTGCTTGATCAAAGGAATTTTATACATT  174
            ||||||||||||||||.|||||||||.|.|||||||||||||||||||||||.||.||||||||||||||||||
Sbjct  593  TTCTCACAATAGGTGACCTTCAGCTTCGAAAACTGGATGAACTAGATTGCTTAATAAAAGGAATTTTATACATT  666

Query  175  GACTCAGTCGGATTCAATGGACGGTCACAGTGCTATTACTTTGAAAACCCTGCTGATTCTGAAAAGTGTCAGAA  248
            ||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||
Sbjct  667  GACTCAGTTGGATTCAATGGACGGTCACAGTGCTATTATTTTGAAAACCCTGCTGATTCTGAAAAATGTCAGAA  740

Query  249  GTTACCATTTGATTTGAAAAATCCGTATCCTCTGCTTCTGGTGAACATTGGCTCAGGGGTTAGCATCTTAGCAG  322
            |||||||||||||||.||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct  741  GTTACCATTTGATTTAAAAAATCCATATCCTCTGCTTCTGGTGAACATCGGCTCAGGGGTTAGCATCTTAGCAG  814

Query  323  TATATTCCAAAGATAATTACAAACGGGTCACAGGTACTAGTCTTGGAGGAGGAACTTTTTTTGGTCTCTGCTGT  396
            |.|||||||||||||||||.||..||||||||||.||.||||||||||||||||||||.|||||||||||||||
Sbjct  815  TGTATTCCAAAGATAATTATAAGAGGGTCACAGGCACCAGTCTTGGAGGAGGAACTTTCTTTGGTCTCTGCTGT  888

Query  397  CTTCTTACTGGCTGTACCACTTTTGAAGAAGCTCTTGAAATGGCATCTCGTGGAGATAGCACCAAAGTGGATAA  470
            ||||||||||||||||..||||||||||||||||||||.||||||||||||||||||||||||||||||||.||
Sbjct  889  CTTCTTACTGGCTGTAGTACTTTTGAAGAAGCTCTTGAGATGGCATCTCGTGGAGATAGCACCAAAGTGGACAA  962

Query  471  ACTAGTACGAGATATTTATGGAGGGGACTATGAGAGGTTTGGACTGCCAGGCTGGGCTGTGGCTTCAAGCTTTG  544
            |.||||.|||||.|||||||||||.|||||||||||||||||..|||||||||||||||||||||||||.||||
Sbjct  963  ATTAGTTCGAGACATTTATGGAGGAGACTATGAGAGGTTTGGCTTGCCAGGCTGGGCTGTGGCTTCAAGTTTTG  1036

Query  545  GAAACATGATGAGCAAGGAGAAGCGAGAGGCTGTCAGTAAAGAGGACCTGGCCAGAGCGACTTTGATCACCATC  618
            |||||||||||||||||||||||.|||||||.|.||||||.|||||.||.||||||||.|||||||||||||||
Sbjct 1037  GAAACATGATGAGCAAGGAGAAGAGAGAGGCGGCCAGTAAGGAGGATCTTGCCAGAGCAACTTTGATCACCATC  1110

Query  619  ACCAACAACATTGGCTCAATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTGGTATTTGTTGGAAA  692
            |||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||.||.||
Sbjct 1111  ACCAACAACATTGGCTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGTCGGCAA  1184

Query  693  TTTCTTGAGAATTAATACGATCGCCATGCGGCTTTTGGCATATGCTTTGGATTATTGGTCCAAGGGGCAGTTGA  766
            ||||.|||||.|.||.|||||.||.|||||||||.||||.|||||..|||||||.|||||||||||||||.|||
Sbjct 1185  TTTCCTGAGAGTCAACACGATTGCTATGCGGCTTCTGGCGTATGCGCTGGATTACTGGTCCAAGGGGCAGCTGA  1258

Query  767  AAGCACTTTTTTCGGAACACGAGGGTTATTTTGGAGCTGTTGGAGCACTCCTTGAGCTGTTGAAGAT-CCCG  837
            |||||||.|||||.||.||||||||.|||||||||||.||||||||||||||.|||||||||||||| ||| 
Sbjct 1259  AAGCACTGTTTTCCGAGCACGAGGGATATTTTGGAGCCGTTGGAGCACTCCTCGAGCTGTTGAAGATACCC-  1329