Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04417
- Subject:
- XM_006530559.2
- Aligned Length:
- 1578
- Identities:
- 761
- Gaps:
- 717
Alignment
Query 1 ATGCAGCGGGCGGCGGCGCTGGTCCGGCGGGGCTGTGGTCCCCGGACCCCCAGCTCCTGGGGCCGCAGCCAGAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CAGCGCGGCCGCCGAGGCCTCGGCGGTGCTCAAGGTGCGGCCCGAGCGCAGCCGGCGCGAGCGCATCCTCACGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGGAGTCCATGAACCCGCAGGTGAAGGCGGTGGAGTACGCCGTGCGGGGACCCATCGTGCTCAAGGCCGGCGAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 ATCGAGCTCGAGCTGCAGCGGGGTATCAAAAAGCCATTCACAGAGGTCATCCGAGCCAACATCGGGGACGCCCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGCTATGGGGCAGCAGCCAATCACCTTCCTCCGGCAGGTGATGGCACTATGCACCTACCCAAACCTGCTGGACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GCCCCAGCTTCCCAGAAGATGCTAAGAAACGTGCCCGGCGGATCCTGCAGGCTTGTGGCGGGAACAGCCTGGGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TCCTACAGTGCTAGCCAGGGTGTCAACTGCATCCGTGAAGATGTGGCTGCCTACATCACCAGGAGGGATGGCGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TGTGCCTGCGGACCCCGACAACATCTACCTGACCACGGGAGCTAGTGACGGCATTTCTACGATCCTGAAGATCC 592
|| .||.|.||
Sbjct 1 -------------------------------------------------------------AT-GTGCACAT-- 10
Query 593 TCGTCTCCGGGGGCGGCAAGTCACGGACAGGTGTGATGATCCCCATCCCACAATATCCCCTCTATTCAGCTGTC 666
|||| |.|||.||||| |...||||.|| .|||| |
Sbjct 11 --------------GGCA-------GCCAGATGTGA--AAGGCCATTCC-----TTCCC--------------C 42
Query 667 ATCTCTGAGCTCGACGCCATCCAGGTGAATTAC-TACCTGGACGAGGAGAACTGCTGG--------GCGCTGAA 731
.|.|||||..|| |||.| | |||.| ||||| ||| ||..|||.
Sbjct 43 GTGTCTGACTTC----------------ATTGCGT---TGGTC-AGGAG------TGGAGCCTGTAGCCATGAC 90
Query 732 TGTGAATGAGCTCCGGCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATCCTAAGGTGCTCTGCATAATCAACC 805
|| ||||| .|||..||| |||..|| ||
Sbjct 91 TG-----GAGCT-----TGGCTTTGC------------------------------TGCCTTG---------CC 115
Query 806 CTGGGAACCCCACAGGCCAGGTACAAAGCAGAAAGTGCATAGAAGATGTGATCCACTTTGCCTGGGAAGAGAAG 879
|.|| |||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 116 CAGG---------AGGCCAGGTACAAAGCAGAAAGTGCATAGAAGATGTGATTCACTTTGCCTGGGAAGAGAAG 180
Query 880 CTCTTTCTCCTGGCTGATGAGGTGTACCAGGACAACGTGTACTCTCCAGATTGCAGATTCCACTCCTTCAAGAA 953
||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.|||||
Sbjct 181 CTTTTTCTCCTGGCTGATGAGGTGTACCAGGACAACGTGTACTCTCCAGACTGCAGATTCCACTCGTTTAAGAA 254
Query 954 GGTGCTGTACGAGATGGGGCCCGAGTACTCCAGCAACGTGGAGCTCGCCTCCTTCCACTCCACCTCCAAGGGCT 1027
.|||||.|||.|||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 AGTGCTTTACCAGATGGGGCACGAGTACTCCAGCAACGTGGAGCTCGCCTCCTTCCACTCCACCTCCAAGGGCT 328
Query 1028 ACATGGGCGAGTGTGGTTACAGAGGAGGCTACATGGAGGTGATCAACCTGCACCCTGAGATCAAGGGCCAGCTG 1101
||||||||||||||||.||||||||.||||||||||||||||||||..|||||||.||||||||.|||||||||
Sbjct 329 ACATGGGCGAGTGTGGCTACAGAGGGGGCTACATGGAGGTGATCAATTTGCACCCCGAGATCAAAGGCCAGCTG 402
Query 1102 GTGAAGCTGCTGTCGGTGCGCCTGTGCCCCCCAGTGTCTGGGCAGGCCGCCATGGACATTGTCGTGAACCCCCC 1175
||||||||.||.|||||.|||||.||.||.||||||||.||.||||||||||||||||||||.|||||.||.||
Sbjct 403 GTGAAGCTACTCTCGGTTCGCCTCTGTCCGCCAGTGTCAGGACAGGCCGCCATGGACATTGTTGTGAATCCACC 476
Query 1176 GGTGGCAGGAGAGGAGTCCTTTGAGCAATTCAGCCGAGAGAAGGAGTCGGTCCTGGGTAATCTGGCCAAAAAAG 1249
||...|||||||||||||||||||||||||||||.|.||.||.||.|..|||||.|||||||||||||||||||
Sbjct 477 GGAACCAGGAGAGGAGTCCTTTGAGCAATTCAGCAGGGAAAAAGAATTCGTCCTTGGTAATCTGGCCAAAAAAG 550
Query 1250 CAAAGCTGACGGAAGACCTGTTTAACCAAGTCCCAGGAATTCACTGCAACCCCTTGCAGGGGGCCATGTACGCC 1323
||||||||||.|||||.||||||||||||||||||||.||.||.||||||||||||||.||.||.|||||.||.
Sbjct 551 CAAAGCTGACAGAAGATCTGTTTAACCAAGTCCCAGGGATCCAGTGCAACCCCTTGCAAGGAGCTATGTATGCG 624
Query 1324 TTCCCTCGGATCTTCATTCCTGCCAAAGCTGTGGAGGCTGCTCAGGCCCATCAAATGGCTCCAGACATGTTCTA 1397
|||||||||||..||||.||||||||.||.||||||||.||||||.|||||.||||||||||||||||||||||
Sbjct 625 TTCCCTCGGATTCTCATCCCTGCCAAGGCCGTGGAGGCAGCTCAGTCCCATAAAATGGCTCCAGACATGTTCTA 698
Query 1398 CTGCATGAAGCTCCTGGAGGAGACTGGCATCTGTGTCGTGCCCGGCAGTGGCTTTGGGCAGAGGGAAGGCACTT 1471
||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||.|.||||||||||
Sbjct 699 CTGCATGAAGCTCCTGGAGGAGACTGGCATCTGTGTCGTGCCTGGCAGTGGCTTTGGGCAGCGAGAAGGCACTT 772
Query 1472 ACCACTTCAGGATGACTATCCTCCCTCCAGTGGAGAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTTCCAC 1545
||||||||||.|||||.||.||||||||.|||||.||.|||||.||.|||||.||.||||||||||||||.|||
Sbjct 773 ACCACTTCAGAATGACCATTCTCCCTCCGGTGGATAAACTGAAGACCGTGCTCCACAAGGTGAAAGACTTTCAC 846
Query 1546 ATCAACTTCCTGGAGAAGTACGCG 1569
.|.||.|||||||||.|||||.|.
Sbjct 847 CTGAAGTTCCTGGAGCAGTACTCA 870
