Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04524
- Subject:
- NR_148479.2
- Aligned Length:
- 3097
- Identities:
- 430
- Gaps:
- 2667
Alignment
Query 1 ------------------------------------------------ATGGAGGACAGTTTCCTTCAATCTTT 26
||||||||||||||||||||||||||
Sbjct 1 GACTTCAGTAAAGGGAACCCGGGGCTCTCGCAGCCAGCCCTCCTGCCCATGGAGGACAGTTTCCTTCAATCTTT 74
Query 27 TGGGAGGCTGAGCCTCCAGCCCCAGCAGCAGCAGCAGCGGCAGCGGCCGCCCCGGCCGCCCCCGCGGGGGACAC 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGGAGGCTGAGCCTCCAGCCCCAGCAGCAGCAGCAGCGGCAGCGGCCGCCCCGGCCGCCCCCGCGGGGGACAC 148
Query 101 CTCCTCGCCGCCACAGCTTTAGGAAACACCTCTACCTCCTGCGAGGCCTCCCGGGCTCCGGGAAAACTACACTG 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTCCTCGCCGCCACAGCTTTAGGAAACACCTCTACCTCCTGCGAGGCCTCCCGGGCTCCGGGAAAACTACACTG 222
Query 175 GCCAGACAATTGCAGCATGACTTTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTTTCTTCAGGGAAGATGG 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCCAGACAATTGCAGCATGACTTTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTTTCTTCAGGGAAGATGG 296
Query 249 TGCCTATGAGTTCAATCCTGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAAAAGAGCAAGAAAAGCAATGA 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCCTATGAGTTCAATCCTGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAAAAGA---------------- 354
Query 323 GGAATGGCATATCCCCCATTATTATTGATAATACCAACCTCCACGCCTGGGAAATGAAGCCCTATGCAGTCATG 396
|
Sbjct 355 -------------------------------------------------------------------------G 355
Query 397 GTATTTCAGACCGAACAAAAGAATCTTTTCAGGCTGGAAATGGACATGGTAGTTTTCAGGCCAGAAA------- 463
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 GTATTTCAGACCGAACAAAAGAATCTTTTCAGGCTGGAAATGGACATGGTAGTTTTCAGGCCAGAAATGGCAGA 429
Query 464 -------------------------------------------------------------------------- 463
Sbjct 430 TAGTGTCTTCAAAGTGGATCTGTGGACTACTCCATCAGAATTGCCTCAGGTGGCTATTAAAATCCGAGTTCATG 503
Query 464 -------------------------TGAAGAAACATTCATGGTGTCTCAAGAGAAAAAATCCACCGAATGAAAG 512
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 504 GACCCCATTCAGTAGTTGGAATCTCTGAAGAAACATTCATGGTGTCTCAAGAGAAAAAATCCACCGAATGAAAG 577
Query 513 AACGGTA------------------------------------------------------------------- 519
|||||||
Sbjct 578 AACGGTATGAACACGATGTTACTTTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGAATGAACAGAAACCAG 651
Query 520 -------------------------------------------------------------------------- 519
Sbjct 652 GACAGGAATAATGCATTGCCTTCCAACAATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGC 725
Query 520 -------------------------------------------------------------------------- 519
Sbjct 726 CCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCTATCT 799
Query 520 -------------------------------------------------------------------------- 519
Sbjct 800 TACAGCCAGGCAGAATTTTCCTAAGTCAGTTTCTACTTCAGTTTTTGTTATTTTTTGTTGCATTTTAGTCAGAG 873
Query 520 -------------------------------------------------------------------------- 519
Sbjct 874 CTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAAGTCATTATATTCACTTTCTTCACCAAAA 947
Query 520 -------------------------------------------------------------------------- 519
Sbjct 948 TTTGTTAAAGTGCTTCTATATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCT 1021
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1022 AGGGTAAGAATTTGAAACCAAAACTTGAGAACACACCCAAGAATATATTTACATAGGTTCATAGATGAAATAAA 1095
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1096 GTGTTTATATTATATATAAGCTTCAGTACCATTTGCTCTGAAGTGATCTATTTATTTTTTCAGGAAATTCATCT 1169
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1170 CCATCGGTAAAGTTGGGAAGGTGGAGAGAAGTGGTGGGGGGGCATTGCTACTTATCAAAGTGCCATTGCTACTT 1243
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1244 TGATAATCTATGTATCTAAAAATGTGAGATGTGCGACTCTTATGATACTGATTTTCCTTTAATGTTAATATGCC 1317
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1318 AGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGGAAGTTATTTCTTTATTTTAATGAT 1391
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1392 GTATCATTGTTAAAAATGCTGTCAAATCCTTAATAGCTACAGGAGCTACTGAGGGAAATCAGTGTCATTATTTA 1465
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1466 AAGTCACGCCTTGTGTTTTTACTACTTTATTCAGCAGGATTAAACCTGAATAACTTTTGGCTGTTGTGCTAATA 1539
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1540 GTGTAAATAAAATAAGCCTGCCTTCATAAAACACTAACTTTTAAAAGGAATAAACGACTTCTAAAATTATGCCT 1613
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1614 ATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGTCA 1687
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1688 TACAGGGATATATAAAAGCCATGCTCATTACAAAATGAGCAGTTGATGTTTTATGTGGCATTAAGACAATCAAG 1761
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1762 TCCTCACAACTCTGGAATGTCTTCTTATACTGATGCTGAATTTATGAATCCAAATTAATTTCCAACAGGTTGGA 1835
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1836 ATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT 1909
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1910 TCTTTCTAATGTTCTGTGAAAAATTATTTTAAGTGTCTTATATAATGGTGCTTTTATGGTTATTAAAAATTGTA 1983
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1984 AATGGTATCACATTTATATGGATTTGTCATTGGATCTTTTTTTGGTTCAACAATAAAAAAATTTAATTACCTAA 2057
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2058 ATGCCAAGAAACTCAACAATATACCAGTTTTTCTGTATCACAGGCTTATTTACCAGTCTTTTTTTTAATAAATA 2131
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2132 GGAATCGTAAAGGTAATGACAAAAGCAGCCTTATAATTTAGTTGCTTATATATTTGATCTGTGTACATGAGACT 2205
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2206 GTTTTAACGTTATCTGACACTACTGAAACCTGCTCGACATCTCCATGACTACCAACACCATGTGTAATGTTTTC 2279
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2280 TTCACTAACATTTTAAAAACTGGTATCTCCTTTGAGTAAGTTTGGCTGACAATAGTAAATCCCAATGAATCTAA 2353
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2354 GGTGTTATCAGCTTTGCTAACTTCTGTATCTCCAAGCACAACATAAAATAATCTCCTAATGATCTACTTAATAA 2427
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2428 TGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATG 2501
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2502 GATGGCTTGACTCGTCTGGGCTGGTAGAGGGGAGAAATGTCAGAGAGCTCAAAGTGGAAATTACCATCCTTTGA 2575
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2576 TTTCACATGAGCGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTGGCTGGCTCCCTGCTTTAGGGTTTTTGG 2649
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2650 CTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAACTTTTCTAGAGCTCTAAAGA 2723
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2724 ATAGTTTCCTGGCCTATTTAATGTCTCTTCTTTCCCTAGCTGACCCCTGAAATATTTGGTTTGTAAACCATAAA 2797
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2798 AATTGATTAAATGCCATCAACTTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTGATTTGT 2871
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2872 GTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAATGCT 2945
Query 520 --------------------------------------------------------------- 519
Sbjct 2946 CTTTATGGGCAATAGGGTCTCATTAAATGATTGCTGAATAAATAACACAAATTTTTACCATTA 3008
