Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04579
- Subject:
- XR_002956824.1
- Aligned Length:
- 2508
- Identities:
- 786
- Gaps:
- 1722
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTCCTTAGTAACCTGGGCGATAGCTGATGAGACGGAAGTCCTGAGAGTTTGACCGATTTAAGGTCACGTGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGAAGTGCTGGAACCAAGACTCGGAGTTTTCTCTAAGTTTAGTGCCTTTATTTTGTTTTAAACCACACTGTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CATTTCCCCCCATTTTGGAAAGCTTTATAGTTGGAAAGAATGAAAACCTGATCTGACCCCTTCATTTTATGGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAACAAAATCTACGTAGGAGAAATCACTTGGTACAAGTCACAAGTCAGTGGTAGAGCTGCCGCAAATGCTTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAATACGTGTGATTATGAATCTAAATGGCAGATGGCAGGGAGTGATAAGTGGATGTTTCCAAGGATTGTCTTC 370
Query 1 ----ATGGCCTTGGGATTAAAGTGCTTCCGCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTCATGGCCTTGGGATTAAAGTGCTTCCGCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCA 444
Query 71 GACCCGTTTCAGAAGTTACACTGAAGACAGTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCA 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACCCGTTTCAGAAGTTACACTGAAGACAGTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCA 518
Query 145 GCTGTACCAGTCCGCCATTTTGCTACCAAGAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAA 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGTACCAGTCCGCCATTTTGCTACCAAGAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAA 592
Query 219 TATTAATGCTGCCTTGGTTGAGGATATAATCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAG 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TATTAATGCTGCCTTGGTTGAGGATATAATCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAG 666
Query 293 CTCTCAAGGATAATTTCAATAAGACTCTCAATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTA 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTCTCAAGGATAATTTCAATAAGACTCTCAATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTA 740
Query 367 ACTGCTGACGGGAAGCTTGCTTTAAACCAGATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAA 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACTGCTGACGGGAAGCTTGCTTTAAACCAGATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAA 814
Query 441 TATGGCCAGCTTCCCAG--------------------------------------------------------- 457
|||||||||||||||||
Sbjct 815 TATGGCCAGCTTCCCAGAGGTAAGATGGCCTTGCTAAAATCTCTCTCCGTGGTCTCTTTTGGAATGGAGGAGAC 888
Query 458 -------------------------------------------------------------------------- 457
Sbjct 889 TGGGTCATATCAGGAGGAAGTGTTCCTTCAGCTTAGGATGAAACAAGAGAGAAGACATAATAAAGAGAACTTAA 962
Query 458 -------------------------------------------------------------------------- 457
Sbjct 963 GGATAAGGCAAAGCTCTTTTCCTGTTGCCAGATTCCTTTTCTGTTAAACTCAGATGCTACAGAGGCTAGGTAAG 1036
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1037 TTGTTTGAATACCCAAACGGGTCCCATCTAAGAAAAACAATACTGGAGATGCAGTGATTGGTGCTTGGCCAGCG 1110
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1111 TGAAAAGGCTCTGGTGAGCTGGAGAGCCTGTACCTTGTGTGAGTGGAATGCCTCTGCCCAGCTCCTGCTGATCA 1184
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1185 TTGCCAGGCACAATGTAGGCCTGGTAATCAGTGTTACCTGATACTACGATTTTTATTTCCAGAAGAAGCTAGTA 1258
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1259 ACACAAATTTTTATGTGACATCTTTATTCTGTAAATGTTGATGACTAATTGAGTTTTTTTTTTAAAGACTATGA 1332
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1333 AGCAAATAAAACAATACTTTAATGGGCCAAATGTGGCCTGAGGGCCACCAATTTGTGACCTCTGCATTAGTATT 1406
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1407 TGGAGCAGACCCTCCAGGAAGTCCTTTTATACTAGACTGACCATTGCAGAATATTGCATGGAGCACAGTGCTTC 1480
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1481 CAAAACTGGAAGGAATTGGCCTGGATTAGGAGTCTTAGAGTACCTGGAATCCGGTCCCATCTCTACCACCAACT 1554
Query 458 ----------------------------------------------------------------AGTGTACAGC 467
||||||||||
Sbjct 1555 GGCTGTTTGACCTTGGGCAAGTTGCTTCACTCTCTGGGCCTCCATTTCCTCATCTGCTAATATAAGTGTACAGC 1628
Query 468 TGCAGCTATCAAGGCTATAAGAGAAAGTGGAATGAATCTGAACCCAGAAGTGGAAGGGACGCTAATTCGGGTAC 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TGCAGCTATCAAGGCTATAAGAGAAAGTGGAATGAATCTGAACCCAGAAGTGGAAGGGACGCTAATTCGGGTAC 1702
Query 542 CCATTCCCC----------------------------------------------------------------- 550
|||||||||
Sbjct 1703 CCATTCCCCAAATGTGAGTGCTTTGAGAGGAGAGAGGAAGAGCTTTGTCAGTTTTGTTCATTGCTGTATTCCTA 1776
Query 551 -------------------------AAGTAACCAGAGAGCACAGAGAAATGCTGGTGAAACTGGCCAAACAGAA 599
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGCCCTCAAACAGAGCCTAGCATGTAAGTAACCAGAGAGCACAGAGAAATGCTGGTGAAACTGGCCAAACAGAA 1850
Query 600 CACCAACAAGGCCAAAGACTCTTTACGGAAGGTTCGCACCAACTCAATGAACAAGCTGAAGAAATCCAAGGATA 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CACCAACAAGGCCAAAGACTCTTTACGGAAGGTTCGCACCAACTCAATGAACAAGCTGAAGAAATCCAAGGATA 1924
Query 674 CAGTCTCAGAGGACACCATTAGGCTAATAGAGAAACAGATCAGCCAAATGGCCGATGACACAGTGGCAGAACTG 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CAGTCTCAGAGGACACCATTAGGCTAATAGAGAAACAGATCAGCCAAATGGCCGATGACACAGTGGCAGAACTG 1998
Query 748 GACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGA----------------------------------- 786
|||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGATGAAAGTCCACTGGGGCCAGCAATACTCCAGAGCC 2072
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2073 CAGTTTCTGCTGGATCCCATGGGTGGCACATTGGGACTTCTCTCCCTCCCCCATCTACACAGAAGACTGTCACC 2146
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2147 ATGCTGACAGAAGCCTGTCCTTGTAAGGCCCAGCCTTCCAGGGGAACACTCAGACATGTTCATTCTCTTCCTGC 2220
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2221 TTCTGCTCTGGGCCGGTGGGTGGCTCTCAGAAAATACTTGCTGCTGGCAAAAGGCCTGTACTCAGGCATTTGCT 2294
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2295 TTGACTTGATGTTGCCAAGGGACTGAGGCCATTGGCAGGCTTAGTACCACCTGCTCCTCATCTTAGGAGTCTCC 2368
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2369 TTTTCAAATAATTAGGCTCTGTTCCCATTTTAAAACTCTGATATTGGCCTTCACCTGTGACTGGACACTTTACT 2442
Query 787 ------------------------------------------------------------------ 786
Sbjct 2443 AGAGGCCCATTTTCACTAAACAATAAAATCTAAATAAATTGGAAGGAATAACAACCACAAAGGAAA 2508
