Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04579
- Subject:
- XR_428543.4
- Aligned Length:
- 2305
- Identities:
- 786
- Gaps:
- 1519
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTCCTTAGTAACCTGGGCGATAGCTGATGAGACGGAAGTCCTGAGAGTTTGACCGATTTAAGGTCACGTGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGAAGTGCTGGAACCAAGACTCGGAGTTTTCTCTAAGTTTAGTGCCTTTATTTTGTTTTAAACCACACTGTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CATTTCCCCCCATTTTGGAAAGCTTTATAGTTGGAAAGAATGAAAACCTGATCTGACCCCTTCATTTTATGGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAACAAAATCTACGTAGGAGAAATCACTTGGTACAAGTCACAAGTCAGTGGTAGAGCTGCCGCAAATGCTTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAATACGTGTGATTATGAATCTAAATGGCAGATGGCAGGGAGTGATAAGTGGATGTTTCCAAGGATTGTCTTC 370
Query 1 ----ATGGCCTTGGGATTAAAGTGCTTCCGCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTCATGGCCTTGGGATTAAAGTGCTTCCGCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCA 444
Query 71 GACCCGTTTCAGAAGTTACACTGAAGACAGTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCA 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACCCGTTTCAGAAGTTACACTGAAGACAGTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCA 518
Query 145 GCTGTACCAGTCCGCCATTTTGCTACCAAGAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAA 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGTACCAGTCCGCCATTTTGCTACCAAGAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAA 592
Query 219 TATTAATGCTGCCTTGGTTGAGGATATAATCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAG 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TATTAATGCTGCCTTGGTTGAGGATATAATCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAG 666
Query 293 CTCTCAAGGATAATTTCAATAAGACTCTCAATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTA 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTCTCAAGGATAATTTCAATAAGACTCTCAATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTA 740
Query 367 ACTGCTGACGGGAAGCTTGCTTTAAACCAGATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAA 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACTGCTGACGGGAAGCTTGCTTTAAACCAGATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAA 814
Query 441 TATGGCCAGCTTCCCAG--------------------------------------------------------- 457
|||||||||||||||||
Sbjct 815 TATGGCCAGCTTCCCAGAGACTATGAAGCAAATAAAACAATACTTTAATGGGCCAAATGTGGCCTGAGGGCCAC 888
Query 458 -------------------------------------------------------------------------- 457
Sbjct 889 CAATTTGTGACCTCTGCATTAGTATTTGGAGCAGACCCTCCAGGAAGTCCTTTTATACTAGACTGACCATTGCA 962
Query 458 -------------------------------------------------------------------------- 457
Sbjct 963 GAATATTGCATGGAGCACAGTGCTTCCAAAACTGGAAGGAATTGGCCTGGATTAGGAGTCTTAGAGTACCTGGA 1036
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1037 ATCCGGTCCCATCTCTACCACCAACTGGCTGTTTGACCTTGGGCAAGTTGCTTCACTCTCTGGGCCTCCATTTC 1110
Query 458 ----------------AGTGTACAGCTGCAGCTATCAAGGCTATAAGAGAAAGTGGAATGAATCTGAACCCAGA 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTCATCTGCTAATATAAGTGTACAGCTGCAGCTATCAAGGCTATAAGAGAAAGTGGAATGAATCTGAACCCAGA 1184
Query 516 AGTGGAAGGGACGCTAATTCGGGTACCCATTCCCCAAGTAACCAGAGAGCACAGAGAAATGCTGGTGAAACTGG 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGTGGAAGGGACGCTAATTCGGGTACCCATTCCCCAAGTAACCAGAGAGCACAGAGAAATGCTGGTGAAACTGG 1258
Query 590 CCAAACAGAACACCAACAAGGCCAAAGACTCTTTACGGAAGGTTCGCACCAACTCAATGAACAAGCTGAAGAAA 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCAAACAGAACACCAACAAGGCCAAAGACTCTTTACGGAAGGTTCGCACCAACTCAATGAACAAGCTGAAGAAA 1332
Query 664 TCCAAGGATACAGTCTCAGAGGACACCATTAGGCTAATAGAGAAACAGATCAGCCAAATGGCCGATGACACAGT 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCCAAGGATACAGTCTCAGAGGACACCATTAGGCTAATAGAGAAACAGATCAGCCAAATGGCCGATGACACAGT 1406
Query 738 GGCAGAACTGGACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGA------------------------- 786
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGCAGAACTGGACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGATGAAAGTCCACTGGGGCCAGCAATA 1480
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1481 CTCCAGAGCCCAGTTTCTGCTGGATCCCATGGGTGGCACATTGGGACTTCTCTCCCTCCCCCATCTACACAGAA 1554
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1555 GACTGTCACCATGCTGACAGAAGCCTGTCCTTGTAAGGCCCAGCCTTCCAGGGGAACACTCAGACATGTTCATT 1628
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1629 CTCTTCCTGCTTCTGCTCTGGGCCGGTGGGTGGCTCTCAGAAAATACTTGCTGCTGGCAAAAGGCCTGTACTCA 1702
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1703 GGCATTTGCTTTGACTTGATGTTGCCAAGGGACTGAGGCCATTGGCAGGCTTAGTACCACCTGCTCCTCATCTT 1776
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1777 AGGAGTCTCCTTTTCAAATAATTAGGCTCTGTTCCCATTTTAAAACTCTGATATTGGCCTTCACCTGTGACTGG 1850
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1851 ACACTTTACTAGAGGCCCATTTTCACTAAACAATAAAATCTAAATAAATTGGAAGGAATAACAACCACAAAGGA 1924
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1925 AAGAATAGAGTTGGTCTGGATTGATGATCACTGAGGATCTGTATGTGAGGCACCCATAACAGTAGTTTTGCCTG 1998
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1999 TGAGTCGTCTTCACACATGCTGTTTTCTCTGCCTGGCTCTCTCTTCCCCTCCTTACCTGGCCAGTCCTGTTTAT 2072
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2073 CATCAGGCCTTGTCTTGGATATCACGTCCTCTGGGAAGTCTTCTTTTCCCCTCTAACCTAGGACCCTCATTACC 2146
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2147 GGCTCTCATAGCACAGTCTACTGCTTTGTACGAATTCTAAGTATTCTTGTTGCACTTAATTAGCCTGTATATCC 2220
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2221 TCAGAACTTTGTGTAATGCCTGGAGCATAGTAGGCAGTCATATGTTGTATCGTGAATAAATTGCACATAGTAGC 2294
Query 787 ----------- 786
Sbjct 2295 TACCCAGCAAA 2305
