Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04602
- Subject:
- XR_001753798.2
- Aligned Length:
- 2916
- Identities:
- 1428
- Gaps:
- 1488
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCTCTCTTGCGCAAGCGCGCTGTCCGCTTCTTCTGGGCGGACGCTCTGGAGGCAAAACATTTCCCTGCTGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGGCGACCACCGTGAGCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCGCGCACGAGGTGGCCTCGTTGGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTACCTTGGTTCGCGGTCGTCCTTGGTTATCGTGAGCGTCCGCGAGTCTCTGGGAGGCCAAGCCTAGGGGCGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGCGCCTGCGCGCGTACGGCGGCCGGAAGGGGCTAGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCT 296
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 297 TTCCCCACGTGGCCGCGAAGACCGGCTCAGGAGCATCTATCGGCTGCACGCCAACATCAACACAGGCGAAGATG 370
Query 4 GTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGATGGGGCC 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGATGGGGCC 444
Query 78 AGAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGG 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGG 518
Query 152 CACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGTGACCTCCAGGAG 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGTGACCTCCAGGAG 592
Query 226 TCTGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA 666
Query 300 GGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCCTACCCCATCATCTTCACTGCCTGGAAGCTGGCCACTGCAG 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCCTACCCCATCATCTTCACTGCCTGGAAGCTGGCCACTGCAG 740
Query 374 GTGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGACAGCCAGACCTCCTGGAT 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGACAGCCAGACCTCCTGGAT 814
Query 448 GCCCAGGGCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGCTGACCTGACCTGCTCTGGGAT 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCCCAGGGCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGCTGACCTGACCTGCTCTGGGAT 888
Query 522 CCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCTGGCGTGCTGCCTC 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCTGGCGTGCTGCCTC 962
Query 596 TGCTGACTGGTGCCATCACCCATCATGGCCACCACACTGACGTGGTCAGGGAAGCCTGCTGGGCCCTGCGTGTC 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGCTGACTGGTGCCATCACCCATCATGGCCACCACACTGACGTGGTCAGGGAAGCCTGCTGGGCCCTGCGTGTC 1036
Query 670 ATGACCTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAA 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGACCTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAA 1110
Query 744 CAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAGCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTG 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAGCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTG 1184
Query 818 GAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGAGCATTCTG 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGAGCATTCTG 1258
Query 892 GTGTCCCTGCTAGCCGACTGCAATGACCACCAGATGAGGGACCAGAGCGGCGTT-------------------- 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GTGTCCCTGCTAGCCGACTGCAATGACCACCAGATGAGGGACCAGAGCGGCGTTCAGCAGGGAGCCAATCAACA 1332
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1333 GGTGCCTCCCTATCCAGCTGCAGCTGCAGGAAAGCCCCCAGGGGTGCCACGGTCCTGCGCCCCCAAGCCCAGCT 1406
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1407 GTTGACGTCAGCCAGCCTCTTTCTGTGCAAGTGGCCAGGAGCTGAATGGGAACCAACTTCAGCAAATGAAGGGA 1480
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1481 TACATTTTGCCCTGTACTCCTGGGCAGTTGGGGGCAGGGTCCTCAGGTTCTCCATCGGGGGATCAGCAGTCCCA 1554
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1555 GTAGCACCTCATCCACTGTCCTCAGTGCAGGGCAGTTAGCGCCTACCCTGGGTCTGTGGCCGTGGACAGGGGGA 1628
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1629 CCCTGTGCTCTGAAGGCCGGCCTGAGTCACATGCCCCCGCTGCCCCTGTCGGGGTAGGGGATCAAGTCACCTGG 1702
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1703 ATGGTACCGTTTGGACACAGGCAGCCTGAGCCACAGGCATCTGCCACCCCTTCTCGTTAGTCACACCCTGCAGT 1776
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1777 CACACCATACCTGTTGGTCAAACAGCAAAACAGCCCCACATTCTCCCTCAGAGCCCTCTCCCACAACCAGCGGC 1850
Query 946 --------------------------------CAGGAGCTCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATC 987
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CTGGCTGGAGGTGAGCGGGCCTTTCCCTTGTGCAGGAGCTCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATC 1924
Query 988 GCAGGCAACGACGACGTGAAAGATGCTATTGTCCGTGCTGGTGGGACGGAGTCCATCGTGGCTGCTATGACCCA 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GCAGGCAACGACGACGTGAAAGATGCTATTGTCCGTGCTGGTGGGACGGAGTCCATCGTGGCTGCTATGACCCA 1998
Query 1062 GCATCTGACCAGCCCCCAGGTGTGTGAGCAGAGCTGCGCGGCCCTGTGCTTCCTGGCCCTGCGTAAGCCCGACA 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GCATCTGACCAGCCCCCAGGTGTGTGAGCAGAGCTGCGCGGCCCTGTGCTTCCTGGCCCTGCGTAAGCCCGACA 2072
Query 1136 ACAGCCGCATCATCGTGGAGGGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCC 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 ACAGCCGCATCATCGTGGAGGGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCC 2146
Query 1210 GGCGTGCAGAAACAGGCTTGCATGCTGATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCCCATCCT 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GGCGTGCAGAAACAGGCTTGCATGCTGATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCCCATCCT 2220
Query 1284 GGACCTGGGGGCTGAGGCACTCATCATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGACGTGGCCAAGGCCG 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GGACCTGGGGGCTGAGGCACTCATCATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGACGTGGCCAAGGCCG 2294
Query 1358 CCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCA--- 1428
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGA 2368
Query 1429 -------------------------------------------------------------------------- 1428
Sbjct 2369 CCCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATGTCCTCCA 2442
Query 1429 -------------------------------------------------------------------------- 1428
Sbjct 2443 CTGTCCCCCATTAGTTCTGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGA 2516
Query 1429 -------------------------------------------------------------------------- 1428
Sbjct 2517 GGGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGC 2590
Query 1429 -------------------------------------------------------------------------- 1428
Sbjct 2591 CAGCAGCACGGATGTTACTGTCCTGCTCCTTCCCCCAGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCC 2664
Query 1429 -------------------------------------------------------------------------- 1428
Sbjct 2665 CATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAGGGCAGGGCAGGCGATTCCAGTG 2738
Query 1429 -------------------------------------------------------------------------- 1428
Sbjct 2739 GGGTTGGGCCCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTTTCTTACCTGTA 2812
Query 1429 -------------------------------------------------------------------------- 1428
Sbjct 2813 AAATGGGTCTCAGATGCTCCGCCCTGCTTGGCCCCAGCTTGTCTGTCTCTGGGTCCTGGGCCAGCCAGGATACC 2886
Query 1429 ------------------------------ 1428
Sbjct 2887 TGATAATAAAAGATCATTGGGTGAACAGCG 2916
