Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04687
- Subject:
- XM_005253834.4
- Aligned Length:
- 1094
- Identities:
- 708
- Gaps:
- 343
Alignment
Query 1 ATGGCTTTAGACATTCTCGCCATGGCCCCTTTGTATCAGGCCCCTGCCATCAACAGAATAGGGCCAAAGACAGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTTTAGACATTCTCGCCATGGCCCCTTTGTATCAGGCCCCTGCCATCAACAGAATAGGGCCAAAGACAGA 74
Query 75 CCCATCTAAAAGGCCAGCTGATCCACTAAAACCCTTGGTTCTCTCTAGGACCAAACTCACCACCATTGAGGCCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCCATCTAAAAGGCCAGCTGATCCACTAAAACCCTTGGTTCTCTCTAGGACCAAACTCACCACCATTGAGGCCA 148
Query 149 AAAGGATCATGTCCATCCTGGATGAGGCGATCTACAAGGTGGAGCTGGTGACCTTGCTGTCGTATGTGGCATCC 222
|||||||||||||||||||||||||||||||||||||||||||...||.||.||| |||| ||||
Sbjct 149 AAAGGATCATGTCCATCCTGGATGAGGCGATCTACAAGGTGGAAAAGGAGAACTT---------TGTG--ATCC 211
Query 223 AACAGAGAGGATATGGAGGGGATGCTGGGGGAGGACGTCATGAGGGCAGTGAGAGAGCATGAGGATCTCTG--C 294
|| |.|.|||.|.|.|| .||| |
Sbjct 212 AA-------------------------------------------GAACTGAAAAACCA--------CCTGCAC 234
Query 295 CAGGTCCTCCTTGAAAACGTCAGGTGCCTGAAAGAGAAAGAA-AG--------GCAATTGCAGGAGCAGAAAGA 359
|||||.||| ||....|||| |||| || |||.| .||||| ||
Sbjct 235 CAGGTGCTC----AAGTTCTCAG---------------AGAACAGCCTCGTTCGCACT-----AAGCAG---GA 281
Query 360 GGCTGAGGAG-----GAAGGGTGGCTCAGAGACCGCCTCCTTTCCATAGAGCTGCAGAAATCCAGCCTCTCACC 428
|||||||.|| ||||| ||| .||||| |.||
Sbjct 282 GGCTGAGAAGCAGCAGAAGG------------CCG----ATTTCC---GGGC---------------------- 314
Query 429 ACTTATGCAGCAGATCAAAGACTCCA------CCAAGAACGTCCTTAGACTCTTGCTCAGCAACCCCCAGGCTG 496
||||.|| .||| ||||||.| ||| ||||
Sbjct 315 -------------ATCACAG--GCCAGGGTGGCCAAGATC-----------------CAG-------CAGG--- 346
Query 497 CTAGGCTCCTGCAGATGCAGACACAGGGTAGAAGTGCAGAAGCCCAGAATTTTATTGACAGCCTG---ATAGAG 567
.|.||||||||.|||||.||||| |||| |||.|||| ||.|||
Sbjct 347 ---AGATCCTGCAGCTGCAGTCACAG-----------------------TTTT----ACAACCTGGTCATGGAG 390
Query 568 CTCCGTGGTTTCCTGTTTGAAAAACTACTCACTAGTCCCATGGAAGC-GAGGGATAAGGCCCAGTTCTTACAGG 640
..||| |||.|| ||| .||||.|.| |||
Sbjct 391 AACCG------------------------------------GGAGGCAGAG----CAGGCGCTG-------AGG 417
Query 641 ATATCAGTAGACAGAATAGTAATAACCAACAAATCATTGATACTCTTGAAAAGGAATTGGCGGAGAGAATGAAG 714
| ||.||| |||| ||| |.|| ||||.||| |||..||
Sbjct 418 A----AGAAGA---AATA-TAA-------------AGTG--------GAAACGGA------------AATCGAG 450
Query 715 AACAGGA------------ATGCAG---------------AGGAGGAGTTGGAGGATCTGGACGCTGTTCACAG 761
|||.||| ||.||| ||||||||||||||||||||||||||||||||||
Sbjct 451 AACTGGATCCAGAAATATGATACAGAGATGGGTGAGAAGCAGGAGGAGTTGGAGGATCTGGACGCTGTTCACAG 524
Query 762 GGAGGAGAAGATCTCGCTGGAGGAGCTCAGGCGGAGGCACAAAGTGCTGGTGGGAGAGTTTGCGCAGATCCGGG 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 525 GGAGGAGAAGATCTCGCTGGAGGAGCTCAGGCGGAGGCACAAAGTGCTGGTGGGAGAGTTTGCGCAGATCCGGG 598
Query 836 AAGAGCGGGAGATCAACTCCAAGAAAAGGATGGAGGCAGAGCAGGAGATGGTGCGCATGGTACGGGCGGCCACG 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 AAGAGCGGGAGATCAACTCCAAGAAAAGGATGGAGGCAGAGCAGGAGATGGTGCGCATGGTACGGGCGGCCACG 672
Query 910 CTCATCCAGGCCCTATGGAAGGGCTATCTGGTGCGCTCCCTGCTCAGATCCAAGAAGAAGCGGGGCAAGGGCAA 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 673 CTCATCCAGGCCCTATGGAAGGGCTATCTGGTGCGCTCCCTGCTCAGATCCAAGAAGAAGCGGGGCAAGGGCAA 746
Query 984 AGCAAAGGACAAGGAGAAGGGCAAGCAGAAAGGCAAGGAGAAGGGCAAGGGCAAGAAA 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 747 AGCAAAGGACAAGGAGAAGGGCAAGCAGAAAGGCAAGGAGAAGGGCAAGGGCAAGAAA 804
