Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04781
Subject:
XM_017312996.1
Aligned Length:
1522
Identities:
947
Gaps:
446

Alignment

Query    1  ATGGCTTCTGGGGACCTTTACGAGGTTGAAAGGATTGTAGACAAGAGGAAGAACAAGAAAGGAAAATGGGAGTA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TCTTATCCGATGGAAAGGCTACGGGAGCACCGAGGACACGTGGGAGCCGGAGCACCACCTCTTGCACTGTGAGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AGTTTATTGATGAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCCAAGCTGCTGCGTGACAGTCGAGGCCCGTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCCTGGAAAGAG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAAGGGGACCTCCCATAAACGGAAGCGAATTAACCCTCCCCTGGCCAAGCCAAAAAAAGGGTATTCAGGCAAGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CCTCTTCAGGAGGTGACAGGGCCACCAAGACGGTGTCTTACAGGACTACCCCCAGTGGTTTGCAAATAATGCCC  444
                                                                                ||||||
Sbjct    1  --------------------------------------------------------------------ATGCCC  6

Query  445  CTGAAAAAGTCTCAGAACGGGATGGAAAATGGGGACGCCGGCTCTGAGAAGGATGAGAGGCACTTTGGAAATGG  518
            |||||.|||.||||||||||..||||.||.||.||.|||||||||||||||||.|||...|||||||||||.||
Sbjct    7  CTGAAGAAGGCTCAGAACGGCCTGGAGAACGGAGATGCCGGCTCTGAGAAGGACGAGTCACACTTTGGAAACGG  80

Query  519  GTCCCATCAGCCTGGCT-TGGATTTGAATGATCATGTTGGAGAGCAAGATATGG---GTGAATGTGACGTGAAT  588
            |||||||||||| ||.| ||||.|||||.||.||..||||||||||.||   ||   ||||.||.||||.||..
Sbjct   81  GTCCCATCAGCC-GGATCTGGAGTTGAACGACCAGCTTGGAGAGCAGGA---GGCCAGTGACTGCGACGGGACC  150

Query  589  CACGCTACACTGGCGGAGAACGGGCTCGGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAA  662
            |||.|..|.||||.||||||.||..|.|||||||||||||||||.||.||..|||||||||||||.||.|||||
Sbjct  151  CACTCCGCGCTGGTGGAGAATGGAGTTGGCTCTGCTCTGACCAATGGAGGCCTGAACCTGCACAGCCCTGTGAA  224

Query  663  GAGGAAGCTGGAAGCGGAGAAGGACTACGTCTTTGACAAAAGGCTCAGATACAGTGTCCGCCAGAATGAAAGCA  736
            ||||||||||||..|||||||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||
Sbjct  225  GAGGAAGCTGGAGACGGAGAAGGACTATGTCTTTGACAAAAGGCTCAGGTACAGCGTCCGCCAGAATGAAAGCA  298

Query  737  ACTGTCGGTTTCGAGACATCGTTGTGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAGTCAGACCTCG  810
            |||||||||||||.||||||||.|||.||||||||||.||.|||||.|||||.||.||||||||.|||||.|||
Sbjct  299  ACTGTCGGTTTCGTGACATCGTGGTGAGGAAGGAAGAGGGCTTCACACACATTCTTCTGTCCAGCCAGACTTCG  372

Query  811  GATAACAATGCCCTGACACCTGAGATCATGAAAGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGACAG  884
            |||||||||||.|||||.||||||||||||||.||||||||||||||.||.||||||||.||||||||.|||||
Sbjct  373  GATAACAATGCACTGACTCCTGAGATCATGAAGGAAGTCCGGCGAGCCCTGTGCAACGCGGCCACAGATGACAG  446

Query  885  CAAACTGCTGCTCCTCAGCGCAGTGGGGAGCGTGTTCTGCAGCGGCCTGGATTATTCCTACCTAATTGGCCGGT  958
            |||.||.|||||.|||||.||.|||||.||.||||||||||||||.||.||.|||||||||||.||.||||||.
Sbjct  447  CAAGCTACTGCTGCTCAGTGCCGTGGGCAGTGTGTTCTGCAGCGGACTAGACTATTCCTACCTGATCGGCCGGC  520

Query  959  TGTCCAGCGACCGGCGAAAGGAGAGCACTCGGATTGCAGAAGCCATCAGGGACTTTGTGAAGGCCTTTATCCAG  1032
            ||||||||||||||.||||||||||||||||.||.||||||||.|||||||||||.||||||||||||||||||
Sbjct  521  TGTCCAGCGACCGGAGAAAGGAGAGCACTCGAATCGCAGAAGCTATCAGGGACTTCGTGAAGGCCTTTATCCAG  594

Query 1033  TTTAAGAAGCCTATCGTGGTGGCCATCAATGGGCCGGCCCTGGGCCTGGGTGCCTCCATCCTGCCCCTCTGTGA  1106
            ||||||||.||.||||||||.|||||.||||||||.||..||||||||||.|||||||||||||||||||||||
Sbjct  595  TTTAAGAAACCCATCGTGGTAGCCATTAATGGGCCAGCATTGGGCCTGGGAGCCTCCATCCTGCCCCTCTGTGA  668

Query 1107  CATCGTGTGGGCCAGTGAGAAGGCCTGGTTCCAGACGCCCTACGCCACCATCCGCCTCACGCCTGCTGGCTGCT  1180
            ||||||.|||||||||||||||||||||||.|||||.||.|||||.||||||||.|||||||||||||||||.|
Sbjct  669  CATCGTATGGGCCAGTGAGAAGGCCTGGTTTCAGACACCATACGCTACCATCCGACTCACGCCTGCTGGCTGTT  742

Query 1181  CCTCCTACACCTTCCCCCAGATCCTGGGCGTCGCGCTGGCCAATGAGATGCTGTTCTGTGGGCGGAAGCTCACC  1254
            ||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.|||||||||||.|||||.
Sbjct  743  CCTCCTACACCTTCCCCCAGATCCTGGGTGTGGCGCTGGCCAATGAAATGCTGTTTTGTGGGCGGAAACTCACT  816

Query 1255  GCCCAGGAGGCCTGCAGCAGGGGGCTGGTGTCGCAGGTCTTCTGGCCCACCACGTTCAGCCAGGAGGTCATGCT  1328
            |||||.|||||.||||||.||||.||.|||||.|||||||||||||||||.||.||||||||.|||||||||||
Sbjct  817  GCCCAAGAGGCATGCAGCCGGGGCCTTGTGTCACAGGTCTTCTGGCCCACGACTTTCAGCCAAGAGGTCATGCT  890

Query 1329  GCGGGTCAAGGAGATGGCATCCTGCAGTGCCGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGAGCTTCCTGA  1402
            ||||||.||||||||||||||.||||||||.|||||.||.|||||||||||||||||.||.||.||||||||||
Sbjct  891  GCGGGTGAAGGAGATGGCATCTTGCAGTGCTGTGGTTTTGGAGGAGTCCAAATGCCTGGTCCGAAGCTTCCTGA  964

Query 1403  AATCAGTGCTGGAAGACGTGAACGAGAAGGAATGCCTCATGCTCAAGCAGCTCTGGAGCTCCTCCAAAGGCCTT  1476
            |.|||||||||||.||.||||||||||||||.|||.|||||||.|||||||||||||||||||||||.|||||.
Sbjct  965  AGTCAGTGCTGGAGGAGGTGAACGAGAAGGAGTGCGTCATGCTGAAGCAGCTCTGGAGCTCCTCCAAGGGCCTG  1038

Query 1477  GACTCCCTTTTCAGCTACCTGCAGGACAAAATTTATGAAGTC  1518
            ||||||||.||||||||.||||||||||||||.|||||||||
Sbjct 1039  GACTCCCTGTTCAGCTATCTGCAGGACAAAATCTATGAAGTC  1080