Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04821
- Subject:
- XR_001736967.2
- Aligned Length:
- 2174
- Identities:
- 710
- Gaps:
- 1463
Alignment
Query 1 -----------------------------------------ATGGCGGCTGCGTCGGGGTCGGTTCTGCAGCGC 33
|||||||||||||||||||||||||||||||||
Sbjct 1 AACGCAGGGGCGGAACCGCATGACTGGCAGTGGCATCAGCGATGGCGGCTGCGTCGGGGTCGGTTCTGCAGCGC 74
Query 34 TGTATCGTGTCGCCGGCAGGGAGGCATAGCGCCTCTCTGATCTTCCTGCATGGCTCAGGTGATTCTGGACAAGG 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGTATCGTGTCGCCGGCAGGGAGGCATAGCGCCTCTCTGATCTTCCTGCATGGCTCAGGTGATTCTGGACAAGG 148
Query 108 ATTAAGAATGTGGATCAAGCAGGTTTTAAATCAAGATTTAACATTCCAACACATAAAAATTATTTATCCAACAG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTAAGAATGTGGATCAAGCAGGTTTTAAATCAAGATTTAACATTCCAACACATAAAAATTATTTATCCAACAG 222
Query 182 CTCCTCCCAGATCATATACTCCTATGAAAGGAGGAATCTCCAATGTATGGTTTGACAGATTTAAAATAACCAAT 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTCCTCCCAGATCATATACTCCTATGAAAGGAGGAATCTCCAATGTATGGTTTGACAGATTTAAAATAACCAAT 296
Query 256 GACTGCCCAGAACACCTTGAATCAATTGATGTCATGTGTCAAGTGCTTACTGATTTGATTGATGAAGAAGTAAA 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GACTGCCCAGAACACCTTGAATCAATTGATGTCATGTGTCAAGTGCTTACTGATTTGATTGATGAAGAAGTAAA 370
Query 330 AAGTGGCATCAAGAAGAACAGGATATTAATAGGAGGATTCTCTATGGGAGGATGCATGGCAATGCATTTAGCAT 403
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 371 AAGTGGCATCAAGAAGAACAGGATATTAATAGGAGGATTCTCTATGGGAGGATGCATGGCAATACATTTAGCAT 444
Query 404 ATAGAAATCATCAAGATGTGGCAGGAGTATTTGCTCTTTCTAGTTTTCTGAATAAAGCATCTGCTGTTTACCAG 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATAGAAATCATCAAGATGTGGCAGGAGTATTTGCTCTTTCTAGTTTTCTGAATAAAGCATCTGCTGTTTACCAG 518
Query 478 GCTCTTCAGAAGAGTAATGGTGTACTTCCTGAATTATTTCAGTGTCATGGTACTGCAGATGAGTTAGTTCTTCA 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTCTTCAGAAGAGTAATGGTGTACTTCCTGAATTATTTCAGTGTCATGGTACTGCAGATGAGTTAGTTCTTCA 592
Query 552 TTCTTGGGCAGAAGAGACAAACTCAATGTTAAAATCTCTAGGAGTGACCACGAAGTTTCATAGTTTTCCAAATG 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCTTGGGCAGAAGAGACAAACTCAATGTTAAAATCTCTAGGAGTGACCACGAAGTTTCATAGTTTTCCAAATG 666
Query 626 TTTACCATGAGCTAAGCAAAACTGAGTTAGACATATTGAAGTTATGGATTCTTACAAAGCTGCCAGGAGAAATG 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTTACCATGAGCTAAGCAAAACTGAGTTAGACATATTGAAGTTATGGATTCTTACAAAGCTGCCAGGAGAAATG 740
Query 700 GAAAAACAAAAA-------------------------------------------------------------- 711
||||||||||||
Sbjct 741 GAAAAACAAAAATGAATGAATCAAGAGTGATTTGTTAATGTCATTAGCTATTGTTAGTGTTAGTGTATTTTTTG 814
Query 712 -------------------------------------------------------------------------- 711
Sbjct 815 TGTGGCCCAAGACAATCTTCTTCCAGTGTGGCCCAGGGAAGCCAAAAAATTGGACACACTTGATGTAAACATTT 888
Query 712 -------------------------------------------------------------------------- 711
Sbjct 889 CAAGAAAATTCAGACTATATGATCACTCAAGACAGCCGATTCACCAGCCTTCTGAAGGGAAGACTAAGCATATT 962
Query 712 -------------------------------------------------------------------------- 711
Sbjct 963 CCTATATTGAAGAAGGAAAGATATCCATGATGGTGATGCCACTAAATAGAAGCATCTTGGATCTTACTATTTGG 1036
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1037 AGTAGAACCACACAAGGAGAAGCCATCCAACCTACATAAGACTATGACCTGCTTTGATTTAAGAAGACAATACC 1110
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1111 ATTTCCAGACATCTCTTTCCTGGGGCTAACTATATTAGTATTCTGCCCTGATGGGAAGGAAGAAACTTCATGGG 1184
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1185 CAGTAAATAGCCAATTTAGAAGCAGGAGAAATATGAGGATAATATTCTATTTACTTAAGGGACACAAAGTAAAT 1258
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1259 AAATGTTTTTGAAACTGAATTGGATTGAAGTGGATCCAGATTTTCACAGGAAAAAAAAGTTTCCTTTTCCCTTA 1332
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1333 GTTCTCCTTACACACCTGGCTTTGCAGGAAAAGAAATTATCATTTGGAAACACACATCTGCCTCAGCCACAGGT 1406
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1407 AGAAAAGGCTTGGACTACATGTTTGGTTTGAAGTTTGAAAATCTCAGTCCTTCCCCAACCATCAAAAATATTTA 1480
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1481 CCTCCCTCCCTTGTCTCACAATCATCTAAGCTGCCTTCTTGAATTGACTCCCACACCTGTTCATCATAGAAGGA 1554
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1555 AAAAAATAAAAGCAAATGCCATATAAAATCTCTCTTCTTCAACAAGGTCTTCTGTTTTGAAATATTGAAACAGT 1628
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1629 TCCTGTTCTATTACCTCACCAGCTGTGGCCTTTTATCTCCTAAAGGGAATAGCTGACGTCTTACCAGTCAAAGT 1702
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1703 CATTGTGCTTACGGACGCCATAAATATCTCCTTTAAATCCTACATGATAAATTTCCCTCTGATTGGTAAAGCAG 1776
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1777 ATACTGTAACATGCAAAGGGGGAGCAGGAGAGTCTTTGATGATGTTAAACTAAGCCCCTGGAGATATCCCAGCT 1850
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1851 CTTCCTCCAGAATTTTACTTTCCAACAACTGGAGTCAACAAATACGGTAGAAAATGTTGTCTGGATTATCTACT 1924
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1925 CCCATTATTTTTTTTTAAACTGGTTTTCAATGATGGGCAACCTAAAATTTACTCACACAGAACACAAAACAGTT 1998
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1999 GAATTTGTTAAAAGTCCAAAATGTGCTTTTGTACTTTTGTAAAATGGGAATGTGCTTCTTGTACAAATCACAAT 2072
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2073 ATGCTTTCTAGACCACAACCTAAAAAGGAAAGAAAAAAATCCTGTGAATAAAAAAAAAAAACAAGGACTTTCAG 2146
Query 712 ---------------------------- 711
Sbjct 2147 TTTTCTACATGCATTTGAAATGACTTTA 2174
