Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05019
- Subject:
- XR_001736988.1
- Aligned Length:
- 1788
- Identities:
- 1087
- Gaps:
- 700
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCGGGGCCGGGAGCTGCGAGGAGCCCCCCAGACGTCGCCGAGCGCGAGGGCGGGCGTGCTCGGAGTGGTCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCAGGTCCCCTCCCTCTCCGCCGGGACGCGGGAGAGCCCGGCT 148
Query 1 -----------------ATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTC 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCGGCGGGGGCGGCCAATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTC 222
Query 58 TGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGGCCGGCCCTG---------------------- 109
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGGCCGGCCCTGCAGGTGGAGTCTCACTCTTGTT 296
Query 110 -------------------------------------------------------------------------- 109
Sbjct 297 GCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGCTCACCCCAACCTCCACCTCCCGGGTTCAAGAGATTCTCCTG 370
Query 110 ---------------------------CAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACTCACTATGAT 156
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTCAGCCTCCCAAGTAGCTGGGATAACAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACTCACTATGAT 444
Query 157 GTGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACA 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACA 518
Query 231 TTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGC 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGC 592
Query 305 CTGTGGAAGACAGGGAAGATCCTTATTCCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATT 378
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGTGGAAGACAGGGAGGATCCTTATTCCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATT 666
Query 379 GAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGT 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGT 740
Query 453 TCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGAGGAACATCA 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGAGGAACATCA 814
Query 527 CTGTCAAACTTTATCAGGCAGAACAAGAGGAGGCCCTCTTCATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTGTCAAACTTTATCAGGCAGAACAAGAGGAGGCCCTCTTCATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTG 888
Query 601 CAGGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATTCATCTTACCAGAGAGCTTTGAAGGTACAATCGTGTG 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAGGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATTCATCTTACCAGAGAGCTTTGAAGGTACAATCGTGTG 962
Query 675 GGAGAGCCAAGACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAGTGACAGTGAATGATGGAGGGGGAGTTC 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGAGAGCCAAGACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAGTGACAGTGAATGATGGAGGGGGAGTTC 1036
Query 749 TCAGAGTCATTACAGCTGGGGAGGGTGCATTGCCTCATGAATTCTTGGAAGGTGTGGAGGGAGTTGCAGGTGGT 822
||||||||||||||
Sbjct 1037 TCAGAGTCATTACA------------------------------------------------------------ 1050
Query 823 TTTATATATACTATTCAGGAAGGTGATGCTCTCTTACACAACCTTCATTCTCGCCCTCAAAGACTTATTGATCA 896
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1051 -------------------AAGGTGATGCTCTCTTACACAACCTTCATTCTCGCCCTCAAAGACTTATTGATCA 1105
Query 897 TATAAGGAATCTCCATGAGGAAGATGCCTTACTGAAGGAGGAAAGCAGCATCTATGATGATATTGTTTTTGTGG 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1106 TATAAGGAATCTCCATGAGGAAGATGCCTTACTGAAGGAGGAAAGCAGCATCTATGATGATATTGTTTTTGTGG 1179
Query 971 ATGTTGTCGACACTTATCGTAATGTTCCTGCAAAATTATTGAACTTCTATAGATGGACTGTGGAAACAACGAGC 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180 ATGTTGTCGACACTTATCGTAATGTTCCTGCAAAATTATTGAACTTCTATAGATGGACTGTGGAAACAACGAGC 1253
Query 1045 TTCAATTTGTTGCTGAAGACAGATGATGACTGTTACATAGACCTCGAAGCTGTATTTAATAGGATTGTCCAAAA 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 TTCAATTTGTTGCTGAAGACAGATGATGACTGTTACATAGACCTCGAAGCTGTATTTAATAGGATTGTCCAAAA 1327
Query 1119 GAATCTGGATGGGCCTAATTTTTGGTGGGGAAATTTCAGACTGAATTGGGCAGTTGACCGAACCGGAAAGTGGC 1192
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1328 GAATCTGGATGGGCCTAATTTTTGGTGGGGAAATTTCAGACTGAATTGG------------------------- 1376
Query 1193 AGGAGTTGGAGTACCCGAGCCCCGCTTACCCTGCCTTTGCATGTGGGTCAGGATATGTGATCTCCAAGGACATC 1266
Sbjct 1377 -------------------------------------------------------------------------- 1376
Query 1267 GTCAAGTGGCTGGCAAGCAACTCGGGGAGGTTAAAGACCTATCAGGGTGAAGATGTAAGCATGGGCATCTGGAT 1340
Sbjct 1377 -------------------------------------------------------------------------- 1376
Query 1341 GGCTGCCATAGGACCTAAAAGATACCAGGACAGTCTGTGGCTGTGTGAGAAGACCTGTGAGACAGGAATGCTGT 1414
Sbjct 1377 -------------------------------------------------------------------------- 1376
Query 1415 CTTCTCCTCAGTATTCTCCGTGGGAACTGACGGAACTGTGGAAACTGAAGGAACGGTGCGGTGATCCTTGTCGA 1488
Sbjct 1377 -------------------------------------------------------------------------- 1376
Query 1489 TGTCAAGCAAGA 1500
Sbjct 1377 ------------ 1376
