Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05019
- Subject:
- XR_873137.1
- Aligned Length:
- 1840
- Identities:
- 905
- Gaps:
- 803
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCGGGCTTACAATCTCAGGCACGCCTCCCTCCTGGGCTCAGCGAGGGACTACCGCTCCCGCCCTTCCGGCAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGAGCGTGCAGGGACGCGGACTGAAGGGCTGGGCGAGAGCGAGGAGGGCTGAACGGGTGGGAAGGCCACGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCGGGGGCGTGGCCTTGGCCGGGAAGCGGCCGCCGCTCGTGGTGCGGATCTAAGGAGAGAGCGGCGGAGACAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCCAGGCGTGGGCGCGAACACTCCTGGTGGCACTCGGTGTTCTTAGGTCCCCTCGCTATTGGCCGGGACGCGG 296
Query 1 -----------------------------------ATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTC 39
|||||||||||||||||||||||||||||.||.||||||
Sbjct 297 GAGAGCGCGGCGGGGGCGCGAGGTGGGAGCGGCCAATGCGAAACTGGCTGGTGCTGCTGTGCCCTTGCGTGCTC 370
Query 40 GGGGCCGCGCTGCACCTCTGG---CTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGGCCGGCCCTGC 110
||||||||||||||||||||| ||..||||.||.|||||||||..|.||..|..|.|||||.||.||.|.||
Sbjct 371 GGGGCCGCGCTGCACCTCTGGCACCTCTGGCTCCGTTCCCCGCCGGACCCCCACAACACCGGGCCCAGCGCGGC 444
Query 111 AGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACTCACTATGATGTGGTAGTTGGCGTGTTGTCAGCTCGCA 184
||||||.|..||||||||||||||.|||||||.||..||||||||||||||||||||.|||||.||||||||.|
Sbjct 445 AGATCAATCAGCCTTATTTCCTCACTGGAAATTTAGCCACTATGATGTGGTAGTTGGTGTGTTATCAGCTCGAA 518
Query 185 ATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATG-AGACATTTGCTACAGCATCCCACATTAAGTCA 257
|||||||.|||||||||||.||||||||.|.|||||||.|| ||| |||||||.||.|||||.|||||||||||
Sbjct 519 ATAACCACGAACTTCGAAATGTGATAAGGAACACCTGGCTGAAGA-ATTTGCTGCATCATCCTACATTAAGTCA 591
Query 258 ACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAAGATCCTTATT 331
||||||||||||||||||||||||||||||.|.||||||||||||||||||||||||||||||.||||||||.|
Sbjct 592 ACGTGTGCTTGTGAAGTTCATAATAGGTGCCCGTGGCTGTGAAGTGCCTGTGGAAGACAGGGAGGATCCTTACT 665
Query 332 CCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCC-GAAGA--- 401
||||...|||.|||||||||||.|||||||||||||||||.||||||||.||.||||| ||.||| |||||
Sbjct 666 CCTGCCGACTGCTCAACATCACCAATCCAGTTTTGAATCAAGAAATTGAGGCATTCAG-CTTTCCTGAAGATGC 738
Query 402 CACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCA 475
|.|.|||||..|.||..||||.||.|||||||||||||||||.|||.|||||||||||||.|||||.|||||||
Sbjct 739 CTCCTCATCTAGACTCTCTGAAGACCGAGTTGTCAGCGTGAGCTTCAGAGTTCTCTACCCAATCGTGATTACCA 812
Query 476 GTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGAGGAACATCACTGTCAAACTTTATCAGGCAGAA 549
||||||||||||||||||||||||.||||||.|||||.||.|||||||||||.|||||..|.||||||.||||.
Sbjct 813 GTCTTGGAGTGTTCTACGATGCCAGTGATGTTGGTTTTCAAAGGAACATCACAGTCAAGTTGTATCAGACAGAG 886
Query 550 CAAGAGGAGGCCCTCTTCATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAGGTGAACAAGCTGTGGTACAA 623
||.|||||||||||.|||||.||.||.||||||||||||||.|||||.||.||.|||||||||||.|||||.||
Sbjct 887 CAGGAGGAGGCCCTTTTCATCGCCCGATTCAGTCCTCCAAGTTGTGGCGTACAAGTGAACAAGCTCTGGTATAA 960
Query 624 GCCCGTGGAACAATTCATCTTACCAGAGAGCTTTGAAGGTACAATCGTGTGGGAGAGCCAAGACCTCCACGGCC 697
||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||.|||||.||||
Sbjct 961 GCCCGTGGAACAGTTCATCTTACCAGAGAGCTTTGAAGGTACAATCGTGTGGGAAAGCCAAGATCTCCATGGCC 1034
Query 698 TTGTGTCAAGAAATCTCCACAAAGTGACAGTGAATGATGGAGGGGGAGTTCTCAGAGTCATTACAGCTGGGGAG 771
|.|||||.|||||.||.||||.||||||||||||||||||||||||.||||||||||||.||.||||||||||.
Sbjct 1035 TCGTGTCCAGAAACCTGCACAGAGTGACAGTGAATGATGGAGGGGGTGTTCTCAGAGTCCTTGCAGCTGGGGAA 1108
Query 772 GGTGCATTGCCTCATGAATTCTTGGAAGGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGAAGG 845
||.|||.||||||||||||||.||||||||||||||||||||||.|||||.|||||.||.|||.||||||
Sbjct 1109 GGGGCACTGCCTCATGAATTCATGGAAGGTGTGGAGGGAGTTGCGGGTGGCTTTATCTACACTGTTCAGG---- 1178
Query 846 TGATGCTCTCTTACACAACCTTCATTCTCGCCCTCAAAGACTTATTGATCATATA-AGGAATCTCCATGAGGAA 918
||||||...|||||.||| ||| ||||.||.|.||||
Sbjct 1179 -------------------------------------AGACTTGCAGATCACATACAGG-ATCTGCAGGTGGAA 1214
Query 919 GATGCCTTACTGAAGGAGGAAAGCAGCATCTATGATGATATTGTTTTTGTGGATGTTGTCGACACTTATCGTAA 992
||||||||||||.|||||||||||||..||.||||.||.|||||.||.|||||||||||.||.|||||.||.||
Sbjct 1215 GATGCCTTACTGCAGGAGGAAAGCAGTGTCCATGACGACATTGTCTTCGTGGATGTTGTGGATACTTACCGGAA 1288
Query 993 TGTTCCTGCAAAATTATTGAACTTCTATAGATGGACTGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGACAG 1066
||||||||||||||||.||||||||||||||||||||||||||.|.||.||||||.|||||.||||.|||||||
Sbjct 1289 TGTTCCTGCAAAATTACTGAACTTCTATAGATGGACTGTGGAATCCACCAGCTTCGATTTGCTGCTCAAGACAG 1362
Query 1067 ATGATGACTGTTACATAGACCTCGAAGCTGTATTTAATAGGATTGTCCAAAAGAATCTGGATGGGCCTAATTTT 1140
||||.||||||||.|
Sbjct 1363 ATGACGACTGTTATA----------------------------------------------------------- 1377
Query 1141 TGGTGGGGAAATTTCAGACTGAATTGGGCAGTTGACCGAACCGGAAAGTGGCAGGAGTTGGAGTACCCGAGCCC 1214
Sbjct 1378 -------------------------------------------------------------------------- 1377
Query 1215 CGCTTACCCTGCCTTTGCATGTGGGTCAGGATATGTGATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCAACT 1288
Sbjct 1378 -------------------------------------------------------------------------- 1377
Query 1289 CGGGGAGGTTAAAGACCTATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGGCTGCCATAGGACCTAAAAGA 1362
Sbjct 1378 -------------------------------------------------------------------------- 1377
Query 1363 TACCAGGACAGTCTGTGGCTGTGTGAGAAGACCTGTGAGACAGGAATGCTGTCTTCTCCTCAGTATTCTCCGTG 1436
Sbjct 1378 -------------------------------------------------------------------------- 1377
Query 1437 GGAACTGACGGAACTGTGGAAACTGAAGGAACGGTGCGGTGATCCTTGTCGATGTCAAGCAAGA 1500
Sbjct 1378 ---------------------------------------------------------------- 1377
