Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05039
- Subject:
- XM_011529931.2
- Aligned Length:
- 1827
- Identities:
- 877
- Gaps:
- 939
Alignment
Query 1 ATGGCGTTCAGGAGACAAGTGAAAAACTTTGTGAAAAATTACTCAGATGCTGAAATAAAAGTCAGGGAAGCAAC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGTTCAGGAGACAAGTGAAAAACTTTGTGAAAAATTACTCAGATGCTGAAATAAAAGTCAGGGAAGCAAC 74
Query 75 TTCTAACGACCCTTGGGGTCCCTCTAGTTCTCTGATGTTAGATATCAGTGACTTGACTTTCAACACAATTTCTC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTCTAACGACCCTTGGGGTCCCTCTAGTTCTCTGATGTTAGATATCAGTGACTTGACTTTCAACACAATTTCTC 148
Query 149 TCTCAGAGATTATGAATATGCTGTGGCACAGACTCAATGACCATGGGAAGAACTGGCGCCACGTGTATAAATCC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTCAGAGATTATGAATATGCTGTGGCACAGACTCAATGACCATGGGAAGAACTGGCGCCACGTGTATAAATCC 222
Query 223 CTTACCCTAATGGATTATCTCATCAAGAATGGATCAAAGAAAGTTATTCAGCATTGCAGAGAGGGGTTCTGTAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTTACCCTAATGGATTATCTCATCAAGAATGGATCAAAGAAAGTTATTCAGCATTGCAGAGAGGGGTTCTGTAA 296
Query 297 CCTTCAAACACTAAAAGATTTTCAGCACATAGATGAAGCTGGAAAAGACCAAGGTTATTATATCCGGGAAAAAT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTTCAAACACTAAAAGATTTTCAGCACATAGATGAAGCTGGAAAAGACCAAGGTTATTATATCCGGGAAAAAT 370
Query 371 CTAAGCAAGTCATCACATTGCTGATGGATGAACCATTGCTGTGTAAAGAGAGGGAAGTGGCATGTCGGACTAGA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTAAGCAAGTCATCACATTGCTGATGGATGAACCATTGCTGTGTAAAGAGAGGGAAGTGGCATGTCGGACTAGA 444
Query 445 CAGCGTACCTCCCACTCTATATTGTTTTCTAAAAGACAACTTGGTTCAAGTAACTCACTGACAGCGTGCACTTC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGCGTACCTCCCACTCTATATTGTTTTCTAAAAGACAACTTGGTTCAAGTAACTCACTGACAGCGTGCACTTC 518
Query 519 TGCCCCCACACCGGATATTTCTGCTTCAGAGAAGAAGTATAAGCTTCCTAAGTTTGGAAGGTTACATAATAAAA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCCCCCACACCGGATATTTCTGCTTCAGAGAAGAAGTATAAGCTTCCTAAGTTTGGAAGGTTACATAATAAAA 592
Query 593 GAAATGTGTGCAAGGCAGGATTGAAACAAGAGCATTGCCAAGATGTTCATTTGCCTACAGAAACTATGTTGTCC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAAATGTGTGCAAGGCAGGATTGAAACAAGAGCATTGCCAAGATGTTCATTTGCCTACAGAAACTATGTTGTCC 666
Query 667 CAGGAAACACTTCCACTCAAGATTCATGGTTGGAAATCAACAGAGGACCTGATGACATTTTTGGATGATGATCC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGGAAACACTTCCACTCAAGATTCATGGTTGGAAATCAACAGAGGACCTGATGACATTTTTGGATGATGATCC 740
Query 741 AGAGCTGCCTTTACTAGCAACACCTCCTTCCATTGTCTCTCCAATCACTTGCTTGTCAGAAGCAGAAGAAGTTT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGAGCTGCCTTTACTAGCAACACCTCCTTCCATTGTCTCTCCAATCACTTGCTTGTCAGAAGCAGAAGAAGTTT 814
Query 815 GTAATCTTTCGGGTGCAGATGCTGTGCCT---ACTCTCTCAGAAAAT-AGTCCTTCTGGGCAGAGAGATGTGAG 884
|||||||||||||||||| |.|.||| ||.| ||| || |.|||
Sbjct 815 GTAATCTTTCGGGTGCAG----TTTCCCTTGCACCC--------AATGAG-CATTC------------------ 857
Query 885 TTTGGACAAGAGATCAGATGGTATCTTTACAAATACTGTCACAGAAAACCTCTTGGAA--ACACCTTTAGAAAA 956
.|||.|| |||| |||||.|||| .|||..||
Sbjct 858 ATTGAAC----------------------------CTGT---------CCTCTGGGAATGGCACTGTT------ 888
Query 957 GCAATCAGCTGCAGAAGGTCTTAAAACATTGACAATTTTACCAGCATGTTGGTCAAGTAAAGAGGAGTTTATCA 1030
||.|||
Sbjct 889 ------AGGTGC-------------------------------------------------------------- 894
Query 1031 GCCCCGACTTAAGGGTATCAAAGTCAGATTCTACTTTCCATAACCAGGCCTCTGTAGAAACACTCTGTCTCTCT 1104
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1105 CCCTCATTCAAAATATTTGACCGAGTGAAGGAGATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAG 1178
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1179 CATTCAGATGGATGATAAAATCCTCAAGACAACCACACGGGTTTCAACTGCTTCTGAGGGAGCATCTTCCTTTT 1252
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1253 CTCCTTTATCCATGTCATCTCCTGATTTAGCCTCTCCAGAGAAGTCAGCTCATCTCTTATCACCAATTCTGGCC 1326
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1327 GGACCTTCCTTCTGGACTCTGTCCCATCAACAGTTGTCTTCTACCTCCTTTAAAGATGAAGATAAGACAGCCAA 1400
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1401 GCTGCATCACTCCTTTGCTTCTAGGGGCCCAGTGTCTTCTGATGTAGAGGAAAATGATAGCCTCAATCTACTGG 1474
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1475 GAATTCTTCCAAATAACTCTGATTCTGCTAAAAAGAATATAAGTCACATTTCTAGTAGTCACTGGGGGGAGTTT 1548
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1549 TCCACCCAAAATGTAGACCAGTTCATCCCTCTGTCCTGTTCTGGTTTTCAGTCAACCAAAGACTTCCCCCAGGA 1622
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1623 ACCTGAAGCAAAGAATTCCATTAGTGTTCTTTTAAGGGAGGTAAAACGTGCGATCGCTAGATTACATGAAGATC 1696
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1697 TGAGCACAGTGATCCAAGAACTTAATGTCATCAATAACATCTTGATGAGCATGAGTCTGAATAGTTCACAAATA 1770
Sbjct 895 -------------------------------------------------------------------------- 894
Query 1771 AGCCAGTCTTCCCAGGTCCCCCAGTCTTCTGAGGGGAGCTCAGATCAGATC 1821
Sbjct 895 --------------------------------------------------- 894
