Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05043
Subject:
NR_037871.1
Aligned Length:
1389
Identities:
619
Gaps:
696

Alignment

Query    1  ATGGCGCAGACAGTGCCGCCCTGCGAGCTGCCCTGCAAAGAGTACGACGTGGCCCGTAACACGGGCGCCTACAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTCCTCCGGCCTGGCCACCGCCAGCTTCCGCACCTCCAAGTACCTGCTGGAGGAGTGGTTCCAGAACTGCTATG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTCGCTACCACCAGGCCTTCGCCGACCGCGACCAGTCGGAGCGGCAGCGGCACGAGAGCCAGCAGCTGGCCACA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAGACCCAGGCGCTGGCGCAGCGCACGCAGCAAGACTCCACGCGCACAGTGGGCGAGCGACTGCAGGACACGCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGCTGGAAGTCGGAGCTGCAGCGTGAGATGGAGGCGCTGGCTGCGGAGACCAACTTGCTCCTGGCCCAGAAGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AACGGCTGGAGCGCGCCCTGGACGCCACAGAGGTGCCCTTCTCCATCACCACTGACAACCTGCAGTGCCGTGAG  444
                                               |.||||.||||      |..|..||.|.|||||      
Sbjct    1  -----------------------------------CACTTCGCCAT------TTTCCTCCGGAAGTGC------  27

Query  445  CGCCGCGAGCACCCCAACCTCGTGC-GCGACCATGTGGAAACGGAGCTGCTGAAGGAAGCC--GAGCTCATCCG  515
                    |.|.||||       || |||..|.|||        |||||    ||.|.|||  |.|||      
Sbjct   28  --------GGATCCCA-------GCGGCGGTCGTGT--------AGCTG----AGCAGGCCTGGGGCT------  68

Query  516  GAACATTCAGGAGCTGCTGAAGAGAACCATC-ATGCAAGCAGTGAGCCAGATCCGACTGAACCGGGAGCACAAG  588
                          ||.|           || |||                |||  |||               
Sbjct   69  --------------TGGT-----------TCTATG----------------TCC--CTG---------------  84

Query  589  GAGACCTGCGAGATGGACTGGTCAGACAAGATGGAGGCCTACAACATCGACGAGACCTGCGGGCGCCACCACAG  662
                         ||| ||               |.|..|.||        |.|.|||..|||.|...|||   
Sbjct   85  -------------TGG-CT---------------ATGTTTCCA--------GTGTCCTCTGGGTGTTTCCA---  118

Query  663  CCAGAGCACCGAGGTGCAGGCTCATCCGTA-------CTCCACCACCTTCCAAGAGAGCGCCTCCACCCCGGAG  729
              ||||||.|.||          |..||.|       ||.|.||.|          ||||||||||||||.|||
Sbjct  119  --AGAGCAACAAG----------AAACGAATAAATCTCTGCCCCGC----------AGCGCCTCCACCCCAGAG  170

Query  730  ACCCGGGCCAAGTTCACGCAGGACAATCTGTGCCGTGCCCAGCGCGAGCGCCTGGCCTCGGCCAACCTGCGGGT  803
            ||||||.||||||||||.||||||||||||||||..|||||||||||||||||||.|||||||||||||.||||
Sbjct  171  ACCCGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGCCTGGACTCGGCCAACCTGTGGGT  244

Query  804  GCTGGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGCGGCTCCAGTGCGACGCCGTGAACCTGGCCTTCG  877
            |||.||||||||||||||||||||||||||||||||||||.|.||||||||.||||||||||||||||||||||
Sbjct  245  GCTTGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGACTCCAGTGTGACGCCGTGAACCTGGCCTTCG  318

Query  878  GGCGCCGCTGTGAGGAGCTGGAGGACGCGCGGTACAAGCTGCATCACCACCTGCACAAGACACTGCGGGAAATC  951
            ||||||||||||||||.||||||||||.||||.||||||||||.||||||||||||||||..||||||||||||
Sbjct  319  GGCGCCGCTGTGAGGAACTGGAGGACGTGCGGCACAAGCTGCAGCACCACCTGCACAAGATGCTGCGGGAAATC  392

Query  952  ACAGATCAGGAACACAACGTGGCGGCACTGAAGCAGGCCATCAAGGACAAAGAGGCACCTCTGCACGTAGCCCA  1025
            ||||||||||||||||||||||.||||||||||.||||||||||||||||.||||.||||||||||.|||||||
Sbjct  393  ACAGATCAGGAACACAACGTGGTGGCACTGAAGGAGGCCATCAAGGACAAGGAGGAACCTCTGCACATAGCCCA  466

Query 1026  GACCCGGCTGTACCTGCGCTCGCACCGGCCCAACATGGAGCTGTGCCGTGACGCAGCCCAGTTCAG-GCTGTTG  1098
            |||||||||||||||||.|||.|||||||||||||||.||||||||||.||.|||||||||||||| |||||  
Sbjct  467  GACCCGGCTGTACCTGCTCTCACACCGGCCCAACATGCAGCTGTGCCGCGAAGCAGCCCAGTTCAGCGCTGT--  538

Query 1099  AGTGAGGTGGAGGAGCTGAACATGTCCCTCACAGCACTGCGAGAGAAGCTTCTAGAAGCGGAGCAGTCCCTGCG  1172
                                                    |.||||||||||||||||.||||||||||||..|
Sbjct  539  ----------------------------------------GGGAGAAGCTTCTAGAAGGGGAGCAGTCCCTTTG  572

Query 1173  CAACCTCGAGGACATCCACATGAGCCTGGAGAAGGACATTGCCGCCATGACCAACAGTCTCTTCATCGACCGCC  1246
            ||||||||||||||||||||||||||||||||||||..||.|||||||||||||||||||||||||||||||||
Sbjct  573  CAACCTCGAGGACATCCACATGAGCCTGGAGAAGGATGTTACCGCCATGACCAACAGTCTCTTCATCGACCGCC  646

Query 1247  AGAAGTGCATGGCCCATCGTACTCGCTACCCCACCATCCTGCAGCTGGCTGGCTACCAG---------------  1305
            |||||||||||||||||||||||.|||||.||.||||||||||||||||||||||||||               
Sbjct  647  AGAAGTGCATGGCCCATCGTACTTGCTACACCCCCATCCTGCAGCTGGCTGGCTACCAGTGAGCAGCGGCACGG  720

Query 1306  ---------------------------------------------------------  1305
                                                                     
Sbjct  721  TGCTTCCCCCCAATCCCCCAAATAAACAGTGCATTAGCTTTCTGCAAAAAAAAAAAA  777