Nucleotide Global Alignment

Description

• Query: ccsbBroad304_05205
• Subject: NM_001291931.2
• Aligned Length: 1563
• Identities: 782
• Gaps: 756

Alignment

Query    1  ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCT--GGCTCTCA  664
                                                                     |.|.|.|  ||.|| ||
Sbjct    1  ---------------------------------------------------------ATGTCATACGGATC-CA  16

Query  665  -CGCCCGTGGAGCAGGTGGTGGCC----AAGACCTTCTCTTGCCAGGCCCT-------GCCCTCCGAG----GG  722
             ||||||||||      |||||||    .||.|.|          ||||||       |.|||.||||    ||
Sbjct   17  TCGCCCGTGGA------GGTGGCCTGGGGAGCCGT----------GGCCCTTTCGGGGGACCTTCGAGACAAGG  74

Query  723  CT-TCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCG  795
            || |||          ||||..||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTGTCA----------GCCCCTAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCG  138

Query  796  GCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGA  869
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  139  GCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGA  212

Query  870  CACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCT  943
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  213  CACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCT  286

Query  944  CCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTG  1017
            ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct  287  CCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCC---GGAGCGTCTGCAGCAGGAGCGTCCTCAGCTG  357

Query 1018  GACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTC  1091
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  358  GACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTC  431

Query 1092  CAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAA---CAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTG  1162
            |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||
Sbjct  432  CAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTG  505

Query 1163  ATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACT  1236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  506  ATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACT  579

Query 1237  GAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAA  1310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  580  GAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAA  653

Query 1311  TCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGATAGTATTGAAGCCAGCCTTG  1384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  654  TCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGATAGTATTGAAGCCAGCCTTG  727

Query 1385  AGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCCGGCACCAACTCCAGAG--AC  1456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||...|||  ..
Sbjct  728  AGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCCGGCACCAACTGATGAGGAGG  801

Query 1457  ACAAGATCAAGTGCTGCTTCCTATCAGCTGGAGTCACTGCCCTGCTTGTCATCATCATCATCATCGCCACCTCT  1530
            ||.|||.|....|||||||             ||..||||||.                               
Sbjct  802  ACGAGACCCCCAGCTGCTT-------------GTGGCTGCCCC-------------------------------  831

Query 1531  GTCCGAAAG  1539
                     
Sbjct  832  ---------  831