Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05418
Subject:
NR_120498.1
Aligned Length:
3178
Identities:
1508
Gaps:
1506

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCGGCGAGGCGTCCCCTGTCCTCCTCCGGGCCCGGCCCGGGGTGCGGGCGAGGCCCCGAGGCCCCCTCCCGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGCTCGGGCGGAGCCGGACGGCCTGGCGGGAGCAGGCGCCGCGGGCCGCGAGCTCCTCATTCGAACCTCCCTC  148

Query    1  ---------------------ATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGC  53
                                 ||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCAGACAGTCTCCGCCCCACAATGCACCGGGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGC  222

Query   54  GGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGGAAGCTTATCTA  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||
Sbjct  223  GGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAGGGAAGTTTATCTA  296

Query  128  ACACGTGGAATGAAAAGTACAGTTCTTTACAGAAAACACCTGTTTGGAAAGGCAGGAATACAAGCTCTGCTGTG  201
            ||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||.|..||.|||||||.
Sbjct  297  ACACATGGAATGAAAAGTACAGTTCTTTACAGAAAACTCCTGTTTGGAAAGGCAGGAATGCGGGCCCTGCTGTA  370

Query  202  GAAATGCCTTTCAGAAATTCAAAACGAAGTCGACTTTTTTCTGATGAAGATGATAGGCAAATAAATACAAGGTC  275
            ||||||||||||||||||||||||.||||||||||.|||||||||||||||||.||.|||||||||||||.|||
Sbjct  371  GAAATGCCTTTCAGAAATTCAAAAAGAAGTCGACTCTTTTCTGATGAAGATGACAGACAAATAAATACAAAGTC  444

Query  276  ACCTAAAAGAAACCAGAGGGTTGCAATGGTTCCACAGAAATTTACAGCAACAATGTCAACACCAGATAAGAAAG  349
            ||||||||||||||||||.||.||||||.|.||||||||||||||||||||.||||||||||||||||||||||
Sbjct  445  ACCTAAAAGAAACCAGAGAGTGGCAATGATCCCACAGAAATTTACAGCAACGATGTCAACACCAGATAAGAAAG  518

Query  350  CTTCACAGAAGATTGGTTTTCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACATAAATGGTGTATATACGAG  423
            |.||||||||||||||||||||||||||.||.||.|||||||||||.|||||||||||.|||||.|||||.|||
Sbjct  519  CATCACAGAAGATTGGTTTTCGATTACGGAACCTACTCAAGCTTCCCAAAGCACATAAGTGGTGCATATATGAG  592

Query  424  TGGTTCTATTCAAATATAGATAAACCACTTTTTGAAGGTGATAATGACTTCTGTGTATGTCTAAAGGAATCTTT  497
            ||||||||.|||||.|||||.||.||||||||||||||.|||||||||||.||||||||.|||||||||||.||
Sbjct  593  TGGTTCTACTCAAACATAGACAAGCCACTTTTTGAAGGAGATAATGACTTTTGTGTATGCCTAAAGGAATCCTT  666

Query  498  TCCTAATTTGAAAACAAGAAAGTTAACAAGAGTAGAATGGGGAAAAATTCGGCGGCTTATGGGAAAACCACGGA  571
            |||||||||||||||||||||.||||||||||||||||||||||||||..||.|.||.|||||||||||.||||
Sbjct  667  TCCTAATTTGAAAACAAGAAAATTAACAAGAGTAGAATGGGGAAAAATCAGGAGACTGATGGGAAAACCTCGGA  740

Query  572  GATGTTCTTCTGCATTTTTTGAGGAAGAGAGATCAGCATTAAAACAGAAACGGCAGAAAATAAGGCTCTTACAA  645
            |||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||
Sbjct  741  GATGTTCTTCTGCATTTTTTGAGGAAGAGAGATCAGCCTTAAAACAGAAGCGGCAGAAAATCAGGCTGTTACAA  814

Query  646  CAAAGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTGGTTATTGGAAC  719
            ||||||||||||||||||||||||||.||||||||||||||.||||||||.|||.|.||.||||||||||||||
Sbjct  815  CAAAGGAAAGTTGCAGATGTTTCACAGTTCAAAGATCTCCCCGATGAAATCCCTCTACCCCTGGTTATTGGAAC  888

Query  720  GAAAGTTACAGCACGATTACGTGGTGTTCATGATGGTTTGTTCACTGGACAAATAGATGCTGTGGATACTCTTA  793
            .|||||||||||.||.||||||||..||||.|||||..||||.|||||.||.||||||||.|||||.|||||||
Sbjct  889  CAAAGTTACAGCGCGGTTACGTGGCATTCACGATGGCCTGTTTACTGGTCAGATAGATGCAGTGGACACTCTTA  962

Query  794  ATGCTACTTATAGAGTAACTTTTGATAGGACAGGGCTTGGAACCCATACCATCCCTGACTATGAAGTTCTCAGT  867
            ||||||||||.|||||||||||.|||||||||||.|||||.||.||.|||||.|||||||||||||||||  .|
Sbjct  963  ATGCTACTTACAGAGTAACTTTCGATAGGACAGGCCTTGGGACTCACACCATTCCTGACTATGAAGTTCT--TT  1034

Query  868  AATGAACCTCATGAGACAATGCCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCTCGATTTTTTATGACCCC  941
            |||||.||||||||||||||||||||..|||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1035  AATGAGCCTCATGAGACAATGCCAATCTCTGCCTTTGGACAAAAACAGCGGCCTTCTCGGTTTTTTATGACCCC  1108

Query  942  ACCACGGTTACATTATACTCCTCCTCTCCAGTCACCAATTATAGATAATGATCCTTTATTAGGACAGTCGCCGT  1015
            .|||||||||||||||||.||||||||||||||||||||||.||||...|||||||||.|.||.|||||.||.|
Sbjct 1109  CCCACGGTTACATTATACCCCTCCTCTCCAGTCACCAATTACAGATGGCGATCCTTTACTGGGGCAGTCACCTT  1182

Query 1016  GGAGAAGTAAAATTTCTGGCTCTGACACTGAAACATTAGGTGGTTTTCCAGTAGAATTTCTTATCCAAGTGACC  1089
            |||||||||||.||||||||||||||||.||.||.|||||.||.||||||||.|||||.||||||||.|||||.
Sbjct 1183  GGAGAAGTAAAGTTTCTGGCTCTGACACGGAGACGTTAGGAGGCTTTCCAGTGGAATTCCTTATCCAGGTGACT  1256

Query 1090  AGATTATCAAAAATTCTCATGATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACAGAAGCAGAAAA  1163
            |..||||||||||||||||||||||||||.||.|||||.||||||||||||||.||||||||||||||||||||
Sbjct 1257  AAGTTATCAAAAATTCTCATGATTAAAAAAGAGCATATAAAGAAATTAAGGGAGATGAACACAGAAGCAGAAAA  1330

Query 1164  ATTGAAATCATATTCCATGCCCATCAGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTGAAC  1237
            ..|||||||.||||||||||||||..|||||||.||||||||||||||.|||||.||.||.|||||||||||.|
Sbjct 1331  GCTGAAATCCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGAGATACGCAACGATCGTCCTGGAGCTTGAGC  1404

Query 1238  AGCTGAACAAGGACCTAAACAAAGTTTTGCATAAAGTTCAACAGTATTGCTATGAGCTTGCTCCAGACCAGGGG  1311
            ||||||||||||||||.|||||||||.|||||||||||||.||||||||||||||||||||.|||||||||||.
Sbjct 1405  AGCTGAACAAGGACCTGAACAAAGTTCTGCATAAAGTTCAGCAGTATTGCTATGAGCTTGCACCAGACCAGGGA  1478

Query 1312  CTCCAGCCTGCAGATCAGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAGCACAGGAAATTGTTCGGCATGC  1385
            |||||||||||.||||||||||||||.||||||||.|||||||||||||||||.||||||||.||.|||||.||
Sbjct 1479  CTCCAGCCTGCCGATCAGCCAACAGACATGAGACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGC  1552

Query 1386  AAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAAATCTGACAGACTTAATTTCCAGGCTTACAGCTATTT  1459
            .||.||..|..|.|||||||||||.||.|||||.|||||||||||.|||||.||.||||||||.||.||.||||
Sbjct 1553  CAACTCTGCTTCCGGACAGCCCTGTGTAGAAAACGAAAATCTGACGGACTTGATCTCCAGGCTCACTGCGATTT  1626

Query 1460  TGTTACAAATTAAGTGTCTAGCAGAAGGAGGAGACCTGAATTCCTTTGAATTCAAATCACTTACAGACTCATTA  1533
            |.|||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.||.|||||.||||||
Sbjct 1627  TATTACAAATTAAGTGTCTGGCAGAGGGAGGAGACCTGAATTCCTTTGAATTCAAATCTCTCACAGATTCATTA  1700

Query 1534  AATGATATCAAGAGTACAATAGACGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAAATCCATGTTGCACA  1607
            |||||.||.||.|..||||||||.|||||||||||||||||.|||||||||||.||||||||||||||||||||
Sbjct 1701  AATGACATAAAAAACACAATAGATGCTTCTAATATCAGTTGTTTTCAGAATAACGTAGAAATCCATGTTGCACA  1774

Query 1608  TATTCAGAGTGGCCTGAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAGAGAC-------  1674
            |||.||||||||||||||.|||||||||||||||||.|||||||||||.||.|||||.|||||||||       
Sbjct 1775  TATCCAGAGTGGCCTGAGTCAGATGGGAAACTTACACGCCTTTGCAGCCAACAACACGAACAGAGACTGAGCAC  1848

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 1849  AGGATTCTGGTACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACACCAG  1922

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 1923  ATAACCTAGCTGCTGGAAAACCGGAGAACTGTACATCTCCAGATACGGCTTTTTAATACACTCTACTGCTTCTT  1996

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 1997  CAACCAGCATTGTGCTGACCAGCATTTATTTATTGTTCTTTTATTATCCAGATGCAGTAGTGTTGCTTATATTT  2070

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2071  CCTGTTTATCAGCAAACATTTTTAACCGGAAACTCTCTGAACGTACTATCCCATGGAGGATAAACCACTGTTTT  2144

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2145  ATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCT  2218

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2219  TTCCATGCATGATGGTGGGAATCCCATCCGAGAGTCACCGGTCCAGTGGAGTTAGTTGGCATTATATCTTGGGC  2292

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2293  TGCAAAATAGACGTCATGAGTGTGAGAGTCCGAGTCGTAAGGAACCCGCTGGGGTACAGATGGGAAACACGGAC  2366

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2367  TTAAGTGTATGTTTCATATACTGACAGTGGGACATGGTTCTATAGATCAATTATAATAATAAATATTTTAATTT  2440

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2441  ATCATAATTTATAAAAGCTTTGTTGTTTATCAGCAGAGGAAATGAAGGAGCCGGAGGAACTGTACTGTGCCCCG  2514

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2515  CTGGATCCCAGCGGGTGGACTTGGCATGCCTTCCATGATTCAGGGCAAAAGTGTTAAGTGTTGAGACTTATTTT  2588

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2589  AAAAAAGACTGATGACACACTATTTTCGTATTTTTTTGTTTATTTGCACAACTTTAAACCAGATGACTGGTTAA  2662

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2663  AATTGAACAGTACACAATTTATAAAGTGAAAATCTTTTATAAGGAAAGCATATGACATGTGAATACACAGGGAG  2736

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2737  GTTTGGCTTTGGTTGTTTTGTTTGGTTTTGTTTTTTCTTTTTAAGAAAAACCCTGCCTAAAATAATCTTGTAAA  2810

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2811  AAGTATGTATTTTAAAATTTTTGTTTTAATATAGAATATTATAAAGCCAAAATATAATTGTTTTCAGATTTGGA  2884

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2885  GTTTAAAATAGAGCTATAGAGGTGGTTCTGATTCTTTGACGTCTCATAAAATGAGACTTTTGTATATTAATGTA  2958

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 2959  TAATAAAACTGAAATAAGATTATTTTCCTTGAAATTTTTGTATAGTTTAAAAATGCTTCTGTGTTCTTTGTTGG  3032

Query 1675  --------------------------------------------------------------------------  1674
                                                                                      
Sbjct 3033  TATTGGGCCACTGCAGATCTTAGTGCAGAGTTTATATTTAGCTAGACTGTTATGTTAATTAAGAAATGCATAAA  3106

Query 1675  ----------------------------------------------------------------------  1674
                                                                                  
Sbjct 3107  TCTTTTATTCTTAATATTTGTAATTCTAAATAAATCAATCTATGAAATTTAAAAAAAAAAAAAAAAAAAA  3176

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