Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05418
- Subject:
- XM_011544173.2
- Aligned Length:
- 2076
- Identities:
- 1167
- Gaps:
- 909
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGACCCAGAACCGAGGGCTTCTTTCCCCCCGCCGGGGCCTCCCTCCCGTTCTCCACTCGGAACAAACAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCAGTTCCCGCAGCTGCAGCGCGGGCCGCGGAACATGCGCCGGGAGCGGGGCCCGGGCGGGACTCCGGAGCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTACTGCTCCCCCCGCGCTCCGGCGCCGGGCCTCGCCGTGCGGCCTCCTTCCTCCCTTCCTCCCGCCCGGCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGGAGGCGGCGGCGGAGGGGCGAGGCGCGGCCCCCCTTCGGCGGCACCTCCTCCCCGGGCAGGCGCGGGCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCCGGGCCCGCCTCAGCCAGCCGCGGCGGGAGCAGCGCAGCGCGGCGCCGCGGGCAGCGAGCTCCGCATTCGA 370
Query 1 --------------------------------ATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCG 444
Query 43 TTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGG 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGG 518
Query 117 AAGCTTATCTAACACGTGGAATGAAAAGTACAGTTCTTTACAGAAAACACCTGTTTGGAAAGGCAGGAATACAA 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAGCTTATCTAACACGTGGAATGAAAAGTACAGTTCTTTACAGAAAACACCTGTTTGGAAAGGCAGGAATACAA 592
Query 191 GCTCTGCTGTGGAAATGCCTTTCAGAAATTCAAAACGAAGTCGACTTTTTTCTGATGAAGATGATAGGCAAATA 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCTCTGCTGTGGAAATGCCTTTCAGAAATTCAAAACGAAGTCGACTTTTTTCTGATGAAGATGATAGGCAAATA 666
Query 265 AATACAAGGTCACCTAAAAGAAACCAGAGGGTTGCAATGGTTCCACAGAAATTTACAGCAACAATGTCAACACC 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AATACAAGGTCACCTAAAAGAAACCAGAGGGTTGCAATGGTTCCACAGAAATTTACAGCAACAATGTCAACACC 740
Query 339 AGATAAGAAAGCTTCACAGAAGATTGGTTTTCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACATAAATGGT 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGATAAGAAAGCTTCACAGAAGATTGGTTTTCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACATAAATGGT 814
Query 413 GTATATACGAGTGGTTCTATTCAAATATAGATAAACCACTTTTTGAAGGTGATAATGACTTCTGTGTATGTCTA 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTATATACGAGTGGTTCTATTCAAATATAGATAAACCACTTTTTGAAGGTGATAATGACTTCTGTGTATGTCTA 888
Query 487 AAGGAATCTTTTCCTAATTTGAAAACAAGAAAGTTAACAAGAGTAGAATGGGGAAAAATTCGGCGGCTTATGGG 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAGGAATCTTTTCCTAATTTGAAAACAAGAAAGTTAACAAGAGTAGAATGGGGAAAAATTCGGCGGCTTATGGG 962
Query 561 AAAACCACGGAGATGTTCTTCTGCATTTTTTGAGGAAGAGAGATCAGCATTAAAACAGAAACGGCAGAAAATAA 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAAACCACGGAGATGTTCTTCTGCATTTTTTGAGGAAGAGAGATCAGCATTAAAACAGAAACGGCAGAAAATAA 1036
Query 635 GGCTCTTACAACAAAGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTG 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGCTCTTACAACAAAGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTG 1110
Query 709 GTTATTGGAACGAAAGTTACAGCACGATTACGTGGTGTTCATGATGGTTTGTTCACTGGACAAATAGATGCTGT 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTTATTGGAACGAAAGTTACAGCACGATTACGTGGTGTTCATGATGGTTTGTTCACTGGACAAATAGATGCTGT 1184
Query 783 GGATACTCTTAATGCTACTTATAGAGTAACTTTTGATAGGACAGGGCTTGGAACCCATACCATCCCTGACTATG 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGATACTCTTAATGCTACTTATAGAGTAACTTTTGATAGGACAGGGCTTGGAACCCATACCATCCCTGACTATG 1258
Query 857 AAGTTCTCAGTAATGAACCTCATGAGACAATGCCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCTCGATTT 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAGTTCTCAGTAATGAACCTCATGAGACAATGCCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCTCGATTT 1332
Query 931 TTTATGACCCCACCACGGTTACATTATACTCCTCCTCTCCAGTCACCAATTATAGATAATGATCCTTTATTAGG 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TTTATGACCCCACCACGGTTACATTATACTCCTCCTCTCCAGTCACCAATTATAGATAATGATCCTTTATTAGG 1406
Query 1005 ACAGTCGCCGTGGAGAAGTAAAATTTCTGGCTCTGACACTGAAACATTAGGTGGTTTTCCAGTAGAATTTCTTA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACAGTCGCCGTGGAGAAGTAAAATTTCTGGCTCTGACACTGAAACATTAGGTGGTTTTCCAGTAGAATTTCTTA 1480
Query 1079 TCCAAGTGACCAGATTATCAAAAATTCTCATGATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACA 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCCAAGTGACCAGATTATCAAAAATTCTCATGATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACA 1554
Query 1153 GAAGCAGAAAAATTGAAATCATATTCCATGCCCATCAGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCT 1226
|||||||||||||||
Sbjct 1555 GAAGCAGAAAAATTG----------------------------------------------------------- 1569
Query 1227 GGAGCTTGAACAGCTGAACAAGGACCTAAACAAAGTTTTGCATAAAGTTCAACAGTATTGCTATGAGCTTGCTC 1300
Sbjct 1570 -------------------------------------------------------------------------- 1569
Query 1301 CAGACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAGCACAGGAAATT 1374
Sbjct 1570 -------------------------------------------------------------------------- 1569
Query 1375 GTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAAATCTGACAGACTTAATTTCCAGGCT 1448
Sbjct 1570 -------------------------------------------------------------------------- 1569
Query 1449 TACAGCTATTTTGTTACAAATTAAGTGTCTAGCAGAAGGAGGAGACCTGAATTCCTTTGAATTCAAATCACTTA 1522
Sbjct 1570 -------------------------------------------------------------------------- 1569
Query 1523 CAGACTCATTAAATGATATCAAGAGTACAATAGACGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAAATC 1596
Sbjct 1570 -------------------------------------------------------------------------- 1569
Query 1597 CATGTTGCACATATTCAGAGTGGCCTGAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAG 1670
Sbjct 1570 -------------------------------------------------------------------------- 1569
Query 1671 AGAC 1674
Sbjct 1570 ---- 1569