Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05743
- Subject:
- NR_046439.2
- Aligned Length:
- 2770
- Identities:
- 366
- Gaps:
- 2393
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCACTTCGCCATTTTCCTCCGGAAGTGCGGATCCCAGCGGCGGTCGTGTAGCTGAGCAGCCCTGGGGCTTGGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTATGTCCCTGTGGCTATGTTTCCAGTGTCCTCTGGGTGTTTCCAAGAGCAACAAGAAACGAATAAATCTCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCTCTTGGTTTACTGTGTCACCCAAGCGACTGGGAGCCAGGTCCTGCTCTGGGACTGAGCCGTTGGAGCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGATGACTGCACTGGGCTGACCGCAACAAGCTGACCACACACACTCCTCACTCCCCTGGCCCTGGTGGGCGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGACACCATGGTGCAGACGGATGTGCTCCTACCAGAGCTGGCCCCACAGACAGTGCCACCCTACGAGCTGCCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAAAGAGTATGACGTGGCCAGAAACACGGGCGCCTACACGTCCTCCGGCCTGGCCACCGCTGGCTGGAGGTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTTCCAGAACTGCTATGCTCGCTACCGCCAGGCCTTCGCCAACTGCAACCAGTCAGAGCGGGAGCTGCAGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACGAGAGCCAGCAGCTGGCCGCAGAGACCCAGGCACTGGCACAGCCGACACAGCAAGACTCCACGTGCAGGGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGCGAGCGACTGCAGGACACGAACAGCTGGAAGTCGGAGCTGCAGCGTGAGGTGGAGGCACTGGCTGCGGAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCGACCTGCTGCTGGCCCAGAAGCAACGGCTGGAGCGCGCCCTGGATGCCATGGAGGTGCCCTTCTCCATCACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACTGACAACATGCAGTGCAGCCAGCGCCACCAGCACACCAACCTTTTGCGTGACCATGTGGAGACAGAGCTGCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAAGGCCTATCCCCCTGCACCCTCTCAGTGCCTCAAGAACTGCTGCAGCTCCCGCAAACCCTCTGCCTGCAACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGGTGCCTGCGAAGTGATGGAGACACTGACAGTGCAGGAAGAGGAAAACCCAGGGACAGAGGGGTGCAGGACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGGGCTCTGGCACACAAGGAGGTGTTGACCAAGGCCTGCAGCAGCTGGGCCTCCTGGGATCCTCACCAAGGACC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCTCTGGTGCTCAGGGCGTCTCCTCCCTCAGGAAGCTGAGCTCATCCGGAACATTCAGGAGCTGCTGAAGAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCATCATGCAAGCAGTGAGCCAGATCTGGTGGGTCGAGGGCTGCCCAAGGGATGACTCCTGACCCCACCCACG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTGGTCCTGGGGCAAGGCATTGAACGACAGGACCCTGAAGCTCAGAGCCGGCAGGGGCTGTCCCAGGTCACAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGGAGCACAGGGCTGGGTGGGGGAGGTTCCGGACCAGCCTGAGTTTGAGTGGCCAAAGCCCAGTGCCACAACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCTCTGCAGCCTCCCAGCATGGGCGGCAGCTCTTGGTCACTGCTGAGCACGAGGACAGCCGGCCCAGAGCTCCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCCTGAAGCGGGCATGAAGTCCTAGCCTGCAGCATGGAGGGTCCCCAGCGGGGCCCTCCCTGGCCACACACCAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCCCTGCCCCACCCCGCCCCAGACTGAACTGAGAGCACATGGAGATCTGCGAGATGGACTGGTCGGACAAGGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAGGCCTACAACCTCGACAAGACTTGCGGGCGCCACCACAGCCAGAGCACCGAGGTGCAGGCTCATCCGGCAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCACCACCTTCCAAGAGAGGGGGGCCCCAGCTCTGCCCCGTGCTTGCCCTGGCTGTGGTCTCGCCTCCCTCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGGGGGCCCCAGCGGCACTGCTTCCCCCAGCCTGGCCCAGAGGCCCTCGCCCCCGAGGGCACTTGGGCAACT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTCTGCCCCTGGCATGAGAAAGCATGCAAGACCTCCTCAAGTGCCCAGCGCGTGCACAGCCTGGTTGCCCGTAG 1850
Query 1 ---------------------------------------ATGTTTCCAGTGTCCTCTGGGTGTTTCCAAG---A 32
|.|.||.|| |.|||.| ||||| |
Sbjct 1851 ACAGGACAGGGTGGGGTGCGGTCAGCCCCAGGCACCGGCAGGATTGCA-TTTCCAC---------CCAAGGCCA 1914
Query 33 GC------AACAAGAA-AC-----------GAATA--AATCTC--TGCCCCGCAGCGCCTCCACCCCAGAGACC 84
|| |.||.||| || |.||| ||.||| .||||||||||||||||||||||||||||
Sbjct 1915 GCAGAGGGAGCACGAACACCGCCCACTTGAGCATAGCAAACTCCTGGCCCCGCAGCGCCTCCACCCCAGAGACC 1988
Query 85 CGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGCCTGGACTCGGCCAACCTGTGGGTGCT 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1989 CGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGCCTGGACTCGGCCAACCTGTGGGTGCT 2062
Query 159 GGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGACTCCAGTGTGACGCCGTGAACCTGGCCTTCGGGT 232
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 2063 GGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGACTCCAGTGTGACGCCGTGAACCTGGCCTTCGGGC 2136
Query 233 GCCGCTGTGAGGAACTGGAGGACGCGCGGCACAAGCTGCAGCACCACCTGCACAAGATGCTGCGGGAAATCACA 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2137 GCCGCTGTGAGGAACTGGAGGACGCGCGGCACAAGCTGCAGCACCACCTGCACAAGATGCTGCGGGAAATCACA 2210
Query 307 GATCAGGAACACAACGTGGTGGCACTGAAGGAGGCCATCAAGGACAAGGAGGAACCTCTGCACATAGCCCAGAC 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2211 GATCAGGAACACAACGTGGTGGCACTGAAGGAGGCCATCAAGGACAAGGAGGAACCTCTGCACATAGCCCAGAC 2284
Query 381 CCGGCTG------------------------------------------------------------------- 387
|||||||
Sbjct 2285 CCGGCTGTAGCTGCTCTCACACCGGCCCAACATGCAGCTGTGCCGCGATGCAGCCCAGTTCAGCCCCAGCTCAC 2358
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2359 ACCCCCCAACACCCCCAAGCTGGTGAGTGAGGTGGAGGAGCTGTACAAGTCCATCACAGCGCTGCGGGAGAAGC 2432
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2433 TTCTACAAGCGGAGCAGTCCCTGCGCAACCTCAAGGACATCCACATGAGCCTGGAGAAGGACGTCACCGCCATG 2506
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2507 ACCAACAGTGTCTTCATCGACCGCCAGAAGTGCATGGCCCATCGTACTTGCTACCCCACCATTCTGCAGCTGGC 2580
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2581 TGGCTACCAGTGAGCAGCGGCACGGTGCTTCCCCCCAATCCCCCAAATAAACAGTGCGTTAGCTTTCTGCAAAA 2654
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2655 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2728
Query 388 -------------------------------- 387
Sbjct 2729 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2760
