Nucleotide Global Alignment

Description

• Query: ccsbBroad304_05803
• Subject: NM_000694.4
• Aligned Length: 1422
• Identities: 1015
• Gaps: 285

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGACCCCCTTGGGGACACGCTGCGGCGACTGCGGGAGGCCTTCCACGCGGGGCGCACGCGGCCAGCTGAGTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGGGCTGCGCAGCTCCAAGGCCTGGGCCGCTTCCTGCAAGAAAACAAGCAGCTTCTGCACGACGCACTGGCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGACCTGCACAAGTCAGCCTTCGAGTCGGAGGTGTCTGAGGTTGCCATCAGCCAGGGCGAGGTCACCCTGGCC  222

Query    1  ---------------------ATGAAGGATGAACCACGGT----CCACGAACCTGTTCATGAAGCTGGACTCGG  49
                                 ||||||||.||.|    ||    |||.|||||||..||.|.||||||||||.|
Sbjct  223  CTCAGGAACCTCCGGGCCTGGATGAAGGACGAGC----GTGTGCCCAAGAACCTGGCCACGCAGCTGGACTCCG  292

Query   50  TCTTCATCTGGAAGGAACCCTTTGGCCTGGTCCTCATCATCGCACCCTGGAACTACCCACTGAACCTGACCCTG  123
            .|||||||.|||||||.|||||||||||||||||||||||.||.|||||||||||.||.|||||||||||.|||
Sbjct  293  CCTTCATCCGGAAGGAGCCCTTTGGCCTGGTCCTCATCATTGCGCCCTGGAACTATCCGCTGAACCTGACGCTG  366

Query  124  GTGCTCCTGGTGGGCGCCCTCGCCGCAGGGAGTTGCGTGGTGCTGAAGCCGTCAGAAATCAGCCAGGGCACAGA  197
            ||||.|||.|||||.||||||||.|||||||..||.||||||||||||||.||.||.||.|||.||..|...||
Sbjct  367  GTGCCCCTCGTGGGAGCCCTCGCTGCAGGGAACTGTGTGGTGCTGAAGCCATCGGAGATTAGCAAGAACGTCGA  440

Query  198  GAAGGTCCTGGCTGAGGTGCTGCCCCAGTACCTGGACCAGAGCTGCTTTGCCGTGGTGCTGGGCGGACCCCAGG  271
            ||||.|||||||.||||||||||||||.|||.|||||||||||||||||||.||||||||||||||.|||||||
Sbjct  441  GAAGATCCTGGCCGAGGTGCTGCCCCAATACGTGGACCAGAGCTGCTTTGCTGTGGTGCTGGGCGGGCCCCAGG  514

Query  272  AGACAGGGCAGCTGCTAGAGCACAAGTTGGACTACATCTTCTTCACAGGGAGCCCTCGTGTGGGCAAGATTGTC  345
            ||||.|||||||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  515  AGACGGGGCAGCTGCTAGAGCACAGGTTCGACTACATCTTCTTCACAGGGAGCCCTCGTGTGGGCAAGATTGTT  588

Query  346  ATGACTGCTGCCACCAAGCACCTGACGCCTGTCACCCTGGAGCTGGGGGGCAAGAACCCCTGCTACGTGGACGA  419
            ||||||||||||.|||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  589  ATGACTGCTGCCGCCAAGCACCTGACACCTGTCACCCTGGAGCTGGGGGGCAAGAACCCTTGCTACGTGGACGA  662

Query  420  CAACTGCGACCCCCAGACCGTGGCCAACCGCGTGGCCTGGTTCTGCTACTTCAATGCCGGCCAGACCTGCGTGG  493
            |||||||||||||||||||||||||||||||||||||||||||.||||||||||.|||||||||||||||||||
Sbjct  663  CAACTGCGACCCCCAGACCGTGGCCAACCGCGTGGCCTGGTTCCGCTACTTCAACGCCGGCCAGACCTGCGTGG  736

Query  494  CCCCTGACTACGTCCTGTGCAGCCCCGAGATGCAGGAGAGGCTGCTGCCCGCCCTGCAGAGCACCATCACCCGT  567
            ||||.|||||||||||.||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  737  CCCCCGACTACGTCCTATGCAGCCCTGAGATGCAGGAGAGGCTGCTGCCTGCCCTGCAGAGCACCATCACCCGT  810

Query  568  TTCTATGGCGACGACCCCCAGAGCTCCCCAAACCTGGGCCGCATCATCAACCAGAAACAGTTCCAGCGGCTGCG  641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  811  TTCTATGGCGACGACCCCCAGAGCTCCCCAAACCTGGGCCGCATCATCAACCAGAAACAGTTCCAGCGGCTGCG  884

Query  642  GGCATTGCTGGGCTGCGGCCGCGTGGCCATTGGGGGCCAGAGCAACGAGAGCGATCGCTACATCGCCCCCACGG  715
            |||||||||||||||||||||.|||||||||||||||||||||.|.||||||||||||||||||||||||||||
Sbjct  885  GGCATTGCTGGGCTGCGGCCGTGTGGCCATTGGGGGCCAGAGCGATGAGAGCGATCGCTACATCGCCCCCACGG  958

Query  716  TGCTGGTGGACGTGCAGGAGACGGAGCCTGTGATGCAGGAGGAGATCTTCGGGCCCATCCTGCCCATCGTGAAC  789
            ||||||||||.||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  TGCTGGTGGATGTGCAGGAGATGGAGCCTGTGATGCAGGAGGAGATCTTCGGGCCCATCCTGCCCATCGTGAAC  1032

Query  790  GTGCAGAGCGTGGACGAGGCCATCAAGTTCATCAACTGGCAGGAGAAGCCCCTGGCCCTGTACGCCTTCTCCAA  863
            |||||||||.||||||||||||||.|||||||||||.|||.|||||||||||||||||||||||||||||||||
Sbjct 1033  GTGCAGAGCTTGGACGAGGCCATCGAGTTCATCAACCGGCGGGAGAAGCCCCTGGCCCTGTACGCCTTCTCCAA  1106

Query  864  CAGCAGCCAGGTTGTGAACCAGATGCTGGAGCGGACCAGCAGCGGCAGCTTTGGAGGCAATGAGGGCTTCACCT  937
            ||||||||||||.||.||.|.|.|||||...|.||||||||||||..||||..|.||.||.||.|||||||...
Sbjct 1107  CAGCAGCCAGGTGGTCAAGCGGGTGCTGACCCAGACCAGCAGCGGGGGCTTCTGTGGGAACGACGGCTTCATGC  1180

Query  938  ACATATCTCTGCTGTC--CGTGCCATTCGGGGGAGTCGGCCACAGTGGGATGGGCCGGTACCACGGCAAGTTCA  1009
            ||||..|.|||  |.|  |.||||.||.||.|||||.||...|||||||||||||||||||||.|||||||||.
Sbjct 1181  ACATGACCCTG--GCCAGCCTGCCTTTTGGAGGAGTGGGTGCCAGTGGGATGGGCCGGTACCATGGCAAGTTCT  1252

Query 1010  CCTTCGACACCTTCTCCCACCACCGCACCTGCCTGCT-CGCCCCCTCCGGCCTGGAGAAATTAAAGGAGATCCA  1082
            ||||||||||||||||||||||.|||.|||||||.|| |||..|| |.||..|||||||..|.||.|...|||.
Sbjct 1253  CCTTCGACACCTTCTCCCACCATCGCGCCTGCCTCCTGCGCAGCC-CGGGGATGGAGAAGCTCAACGCCCTCCG  1325

Query 1083  CTACCCACC-CTAT------ACCGACTGGAACCAGCA-GCTGTTACGCTG--GGGCATG--GGCTCCCAG----  1140
            ||||||.|| |.||      .|||.|||     ||.| |||     ||||  ||.||||  ||| ||.||    
Sbjct 1326  CTACCCGCCGCAATCGCCGCGCCGCCTG-----AGGATGCT-----GCTGGTGGCCATGGAGGC-CCAAGGCTG  1388

Query 1141  -AGCTGTACCCTCCTG  1155
             |||||.||.||.||.
Sbjct 1389  CAGCTGCACACTGCTC  1404