Nucleotide Global Alignment

Description

• Query: ccsbBroad304_05803
• Subject: NM_001030010.3
• Aligned Length: 1308
• Identities: 1014
• Gaps: 168

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGACCCCCTTGGGGACACGCTGCGGCGACTGCGGGAGGCCTTCCACGCGGGGCGCACGCGGCCAGCTGAGTT  74

Query    1  -------------------------------------------ATGAAGGA-----TGAACCAC-----GGTCC  21
                                                       |..|||.|     ||.||.||     ||.||
Sbjct   75  CCGGGCTGCGCAGCTCCAAGGCCTGGGCCGCTTCCTGCAAGAAAACAAGCAGCTTCTGCACGACGCACTGGCCC  148

Query   22  ACGAACCT------GTTCATGAAGCTGGACTCGGTCTTCATCTGGAAGGAACCCTTTGGCCTGGTCCTCATCAT  89
            | |.||||      |..||.|.||||||||||.|.|||||||.|||||||.|||||||||||||||||||||||
Sbjct  149  A-GGACCTGCACAAGGCCACGCAGCTGGACTCCGCCTTCATCCGGAAGGAGCCCTTTGGCCTGGTCCTCATCAT  221

Query   90  CGCACCCTGGAACTACCCACTGAACCTGACCCTGGTGCTCCTGGTGGGCGCCCTCGCCGCAGGGAGTTGCGTGG  163
            .||.|||||||||||.||.|||||||||||.|||||||.|||.|||||.||||||||.|||||||..||.||||
Sbjct  222  TGCGCCCTGGAACTATCCGCTGAACCTGACGCTGGTGCCCCTCGTGGGAGCCCTCGCTGCAGGGAACTGTGTGG  295

Query  164  TGCTGAAGCCGTCAGAAATCAGCCAGGGCACAGAGAAGGTCCTGGCTGAGGTGCTGCCCCAGTACCTGGACCAG  237
            ||||||||||.||.||.||.|||.||..|...||||||.|||||||.||||||||||||||.|||.||||||||
Sbjct  296  TGCTGAAGCCATCGGAGATTAGCAAGAACGTCGAGAAGATCCTGGCCGAGGTGCTGCCCCAATACGTGGACCAG  369

Query  238  AGCTGCTTTGCCGTGGTGCTGGGCGGACCCCAGGAGACAGGGCAGCTGCTAGAGCACAAGTTGGACTACATCTT  311
            |||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||||.|||.|||||||||||
Sbjct  370  AGCTGCTTTGCTGTGGTGCTGGGCGGGCCCCAGGAGACGGGGCAGCTGCTAGAGCACAGGTTCGACTACATCTT  443

Query  312  CTTCACAGGGAGCCCTCGTGTGGGCAAGATTGTCATGACTGCTGCCACCAAGCACCTGACGCCTGTCACCCTGG  385
            |||||||||||||||||||||||||||||||||.||||||||||||.|||||||||||||.|||||||||||||
Sbjct  444  CTTCACAGGGAGCCCTCGTGTGGGCAAGATTGTTATGACTGCTGCCGCCAAGCACCTGACACCTGTCACCCTGG  517

Query  386  AGCTGGGGGGCAAGAACCCCTGCTACGTGGACGACAACTGCGACCCCCAGACCGTGGCCAACCGCGTGGCCTGG  459
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  518  AGCTGGGGGGCAAGAACCCTTGCTACGTGGACGACAACTGCGACCCCCAGACCGTGGCCAACCGCGTGGCCTGG  591

Query  460  TTCTGCTACTTCAATGCCGGCCAGACCTGCGTGGCCCCTGACTACGTCCTGTGCAGCCCCGAGATGCAGGAGAG  533
            |||.||||||||||.|||||||||||||||||||||||.|||||||||||.||||||||.||||||||||||||
Sbjct  592  TTCCGCTACTTCAACGCCGGCCAGACCTGCGTGGCCCCCGACTACGTCCTATGCAGCCCTGAGATGCAGGAGAG  665

Query  534  GCTGCTGCCCGCCCTGCAGAGCACCATCACCCGTTTCTATGGCGACGACCCCCAGAGCTCCCCAAACCTGGGCC  607
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  666  GCTGCTGCCTGCCCTGCAGAGCACCATCACCCGTTTCTATGGCGACGACCCCCAGAGCTCCCCAAACCTGGGCC  739

Query  608  GCATCATCAACCAGAAACAGTTCCAGCGGCTGCGGGCATTGCTGGGCTGCGGCCGCGTGGCCATTGGGGGCCAG  681
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  740  GCATCATCAACCAGAAACAGTTCCAGCGGCTGCGGGCATTGCTGGGCTGCGGCCGTGTGGCCATTGGGGGCCAG  813

Query  682  AGCAACGAGAGCGATCGCTACATCGCCCCCACGGTGCTGGTGGACGTGCAGGAGACGGAGCCTGTGATGCAGGA  755
            |||.|.||||||||||||||||||||||||||||||||||||||.||||||||||.||||||||||||||||||
Sbjct  814  AGCGATGAGAGCGATCGCTACATCGCCCCCACGGTGCTGGTGGATGTGCAGGAGATGGAGCCTGTGATGCAGGA  887

Query  756  GGAGATCTTCGGGCCCATCCTGCCCATCGTGAACGTGCAGAGCGTGGACGAGGCCATCAAGTTCATCAACTGGC  829
            |||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||
Sbjct  888  GGAGATCTTCGGGCCCATCCTGCCCATCGTGAACGTGCAGAGCTTGGACGAGGCCATCGAGTTCATCAACCGGC  961

Query  830  AGGAGAAGCCCCTGGCCCTGTACGCCTTCTCCAACAGCAGCCAGGTTGTGAACCAGATGCTGGAGCGGACCAGC  903
            .|||||||||||||||||||||||||||||||||||||||||||||.||.||.|.|.|||||...|.|||||||
Sbjct  962  GGGAGAAGCCCCTGGCCCTGTACGCCTTCTCCAACAGCAGCCAGGTGGTCAAGCGGGTGCTGACCCAGACCAGC  1035

Query  904  AGCGGCAGCTTTGGAGGCAATGAGGGCTTCACCTACATATCTCTGCTGTC--CGTGCCATTCGGGGGAGTCGGC  975
            |||||..||||..|.||.||.||.|||||||...||||..|.|||  |.|  |.||||.||.||.|||||.||.
Sbjct 1036  AGCGGGGGCTTCTGTGGGAACGACGGCTTCATGCACATGACCCTG--GCCAGCCTGCCTTTTGGAGGAGTGGGT  1107

Query  976  CACAGTGGGATGGGCCGGTACCACGGCAAGTTCACCTTCGACACCTTCTCCCACCACCGCACCTGCCTGCT-CG  1048
            ..|||||||||||||||||||||.|||||||||.||||||||||||||||||||||.|||.|||||||.|| ||
Sbjct 1108  GCCAGTGGGATGGGCCGGTACCATGGCAAGTTCTCCTTCGACACCTTCTCCCACCATCGCGCCTGCCTCCTGCG  1181

Query 1049  CCCCCTCCGGCCTGGAGAAATTAAAGGAGATCCACTACCCACC-CTAT------ACCGACTGGAACCAGCA-GC  1114
            |..|| |.||..|||||||..|.||.|...|||.||||||.|| |.||      .|||.|||     ||.| ||
Sbjct 1182  CAGCC-CGGGGATGGAGAAGCTCAACGCCCTCCGCTACCCGCCGCAATCGCCGCGCCGCCTG-----AGGATGC  1249

Query 1115  TGTTACGCTG--GGGCATG--GGCTCCCAG-----AGCTGTACCCTCCTG  1155
            |     ||||  ||.||||  ||| ||.||     |||||.||.||.||.
Sbjct 1250  T-----GCTGGTGGCCATGGAGGC-CCAAGGCTGCAGCTGCACACTGCTC  1293