Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06036
Subject:
XM_006525561.3
Aligned Length:
940
Identities:
355
Gaps:
545

Alignment

Query   1  ------------------------------------------------ATGACCATGGTAACAGTTGAATCCCA  26
                                                           ||||||||||.||||||||||||.||
Sbjct   1  ATGAGCAAATGTGGCAGGAAAAAGTATATGAGGACAAATGTAAGGCAAATGACCATGGAAACAGTTGAATCACA  74

Query  27  GCATGATGGAAGTATAACAGCTTCTTTGACAGAG---AGCAAGTCTGCTCATGTGCAGACTCAGACTGGCCAAA  97
           |||.|||.|||||.|||||..||||.||.|||||   |||   |||||||||.||      ||||||||.||||
Sbjct  75  GCAGGATCGAAGTGTAACACGTTCTGTGGCAGAGCATAGC---TCTGCTCATATG------CAGACTGGTCAAA  139

Query  98  ATTCAATCCCTGCTTTAGCTCAGGTAGCAGCAATTGCAGAGACAGATGAATCTGCAGAATCAGAAGGTGTAATT  171
           .|||..|.|||.||.||||||||||||||.|||||||||||||||||||.||||||||.||||||   ||||||
Sbjct 140  TTTCTGTTCCTACTCTAGCTCAGGTAGCAACAATTGCAGAGACAGATGATTCTGCAGACTCAGAA---GTAATT  210

Query 172  GATTCTCATAAACGTAGAGAAATCCTTTCACGAAGACCCTCTTATAGGAAAATACTGAATGAACTGTCCTCTGA  245
           |||||.|||||||||||||||||.|||||||||||||||||.|||||.|||||||||||||||||.||||||||
Sbjct 211  GATTCGCATAAACGTAGAGAAATTCTTTCACGAAGACCCTCATATAGAAAAATACTGAATGAACTTTCCTCTGA  284

Query 246  TGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAGATCAGAGGAAGAAGGAACACCACCTAGTATTGCTACCATGG  319
           ||||||||||.|||||||||||||||||||.|.|||||||||||||||.||||||||||..|||||||||||||
Sbjct 285  TGTGCCTGGTATTCCCAAGATTGAAGAAGAAAAATCAGAGGAAGAAGGGACACCACCTAACATTGCTACCATGG  358

Query 320  CAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAGTATG-TAT-GCTGCAA---------------  376
           ||||||||||||||||||||||||||||||||||||||||||  .|| ||| ||| |||               
Sbjct 359  CAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACA--TTGCTATAGCT-CAAGGTGGAACAATCCAG  429

Query 377  --TTC--------GATATGAT------------------------ACAGTGCTAGCTTTA--AGTCTTCTC---  411
             |||        |||.||||                        |||.||..|..||.|  || ||.|||   
Sbjct 430  ATTTCTAACCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATTAACAATGACAAATTCAGGAG-CTCCTCCGC  502

Query 412  --------------------------------------------------------------------------  411
                                                                                     
Sbjct 503  CAGGTGCTACAATTGTACAGTATGCAGCACAATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGGCAGCCAG  576

Query 412  --------------------------------------------------------------------------  411
                                                                                     
Sbjct 577  GTTGTTGTTCAAGATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTA  650

Query 412  --------------------------------------------------------------------------  411
                                                                                     
Sbjct 651  CCAGATCCGAGCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCTGCCTCACCAGGAAGCCTGCACAGTC  724

Query 412  --------------------------------------------------------------------------  411
                                                                                     
Sbjct 725  CCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCCCGGGAG  798

Query 412  --------------------------------------------------------------------------  411
                                                                                     
Sbjct 799  TGTCGCAGGAAGAAGAAAGAATATGTCAAATGTCTTGAAAATCGTGTGGCTGTGCTTGAAAATCAAAACAAGAC  872

Query 412  ----------------------------------------------------  411
                                                               
Sbjct 873  CCTCATTGAGGAACTCAAGGCCCTCAAAGACCTTTATTGCCATAAAGCAGAG  924