Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06539
- Subject:
- XM_017313817.1
- Aligned Length:
- 2201
- Identities:
- 1296
- Gaps:
- 652
Alignment
Query 1 ATGACGGAGGGCACGTGTCTGCGGCGCCGAGGGGGCCCCTACAAGACCGAGCCCGCCACCGACCTCGGCCGCTG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCGACTCAACTGCGAGAGGGGCCGGCAGACGTGGACCTACCTGCAGGACGAGCGCGCCGGCCGCGAGCAGACCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GCCTGGAAGCCTACGCCCTGGGGCTGGACACCAAGAATTACTTTAAGGACTTGCCCAAAGCCCACACCGCCTTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAGGGGGCTCTGAACGGGATGACATTTTACGTGGGGCTGCAGGCTGAGGATGGGCACTGGACGGGTGATTATGG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGGCCCACTTTTCCTCCTGCCAGGCCTCCTGATCACTTGCCACGTGGCACGCATCCCTCTGCCAGCCGGATACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GAGAAGAGATTGTGCGGTACCTGCGGTCAGTGCAGCTCCCTGACGGTGGCTGGGGCCTGCACATTGAGGATAAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TCCACCGTGTTTGGGACTGCGCTCAACTATGTGTCTCTCAGAATTCTGGGTGTTGGGCCTGACGATCCTGACCT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GGTACGAGCCCGGAACATTCTTCACAAGAAAGGTGGTGCTGTGGCCATCCCCTCCTGGGGGAAGTTCTGGCTGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CTGTCCTGAATGTTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTTCCTGACTGGGCA 666
|||||||||||||||||.||||.|
Sbjct 1 --------------------------------------------------ATGTGGCTGTTTCCTGAATGGGTA 24
Query 667 CCGGCACACCCCTCCACACTCTGGTGCCACTGCCGGCAGGTGTACCTGCCCATGAGCTACTGCTACGCCGTTCG 740
||.||.|||||||||||.||||||||.||||||||||||||.||.|||||||||||.||||||||||||..|||
Sbjct 25 CCAGCGCACCCCTCCACTCTCTGGTGTCACTGCCGGCAGGTCTATCTGCCCATGAGTTACTGCTACGCCACTCG 98
Query 741 GCTGAGTGCCGCGGAAGACCCGCTGGTCCAGAGCCTCCGCCAGGAGCTCTATGTGGAGGACTTCGCCAGCATTG 814
|||.||||||.|.||.|||||.|||||.|||||||||||||||||.|||||||||.||||.|.|||||||||.|
Sbjct 99 GCTAAGTGCCTCAGAGGACCCACTGGTTCAGAGCCTCCGCCAGGAACTCTATGTGCAGGATTACGCCAGCATCG 172
Query 815 ACTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGAGCTGTACACGCCCCACAGCTGGCTGCTCCGCGTGGTA 888
|.||||..||||||||||||||||||.|||||||.|||.||||||||||.||||||||||||||.|..|||||.
Sbjct 173 ATTGGCCAGCGCAGAGGAACAACGTGTCCCCCGATGAGATGTACACGCCACACAGCTGGCTGCTGCATGTGGTG 246
Query 889 TATGCGCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGA 962
||||..|||||||||||||||||.|....|||.||..||..|||||||.||.|||||||.||||.|||||||||
Sbjct 247 TATGGACTCCTCAACCTGTATGAACGTTTCCATAGCACCAGCCTGCGGAAGTGGGCCGTCCAGATGCTGTATGA 320
Query 963 ACACATTGTGGCCGACGACCGATTCACCAAGAGCATCAGCATCGGCCCGATCTCGAAAACCATCAACATGCTTG 1036
||||||||..||.||.|||.|.|||||.|||.||||||||||||||||||||||.||.||||||||||||||||
Sbjct 321 ACACATTGCAGCTGATGACTGTTTCACTAAGTGCATCAGCATCGGCCCGATCTCAAAGACCATCAACATGCTTG 394
Query 1037 TGCGCTGGTATGTGGACGGGCCCGCCTCCACTGCCTTCCAGGAGCATGTCTCCAGAATCCCGGACTATCTCTGG 1110
|.||.||||..|||||.||.||..|||||.|.||||||||||||||.||.||..|.|||...||.||.||.|||
Sbjct 395 TTCGTTGGTCAGTGGATGGACCATCCTCCCCGGCCTTCCAGGAGCACGTTTCTCGGATCAAAGATTACCTTTGG 468
Query 1111 ATGGGCCTTGACGGCATGAAAATGCAGGGCACCAACGGCTCACAGATCTGGGACACCGCATTCGCCATCCAGGC 1184
.||||||||||.|||||||||||||||||||||||.||.|||||||||||||||||..||||.||.|||||.||
Sbjct 469 CTGGGCCTTGATGGCATGAAAATGCAGGGCACCAATGGATCACAGATCTGGGACACTTCATTTGCTATCCAAGC 542
Query 1185 TCTGCTTGAGGCGGGCGGGCACCACAGGCCCGAGTTTTCGTCCTGCCTGCAGAAGGCTCATGAGTTCCTGAGGC 1258
.|||.|.|||||.||.|..||||||||.||.||||||..|.|||||||||||||||||||.|||||||||.|||
Sbjct 543 ACTGTTAGAGGCAGGTGCACACCACAGACCTGAGTTTCTGCCCTGCCTGCAGAAGGCTCACGAGTTCCTGCGGC 616
Query 1259 TCTCACAGGTCCCAGATAACCCTCCCGACTACCAGAAGTACTACCGCCAGATGCGCAAGGGTGGCTTCTCCTTC 1332
|.||||||||.|||||.|||..|||.|||||.|||||||||||.|||||.||||||||||||||.|||||||||
Sbjct 617 TTTCACAGGTTCCAGAAAACTGTCCTGACTATCAGAAGTACTATCGCCATATGCGCAAGGGTGGTTTCTCCTTC 690
Query 1333 AGTACGCTGGACTGCGGCTGGATCGTTTCTGACTGCACGGCTGAGGCCTTGAAGGCTGTGCTGCTCCTGCAGGA 1406
||.||.||||||||.||||||||||||.||||||||||.||.||||..||||||||||||||||||||||||.|
Sbjct 691 AGCACACTGGACTGTGGCTGGATCGTTGCTGACTGCACAGCCGAGGGTTTGAAGGCTGTGCTGCTCCTGCAGAA 764
Query 1407 GAAGTGTCC--CCATGTCACCGAGCACATCCCCAGAGAACGGCTCTGCGATGCTGTGGCTGTGCTGCTGAACAT 1478
..||||||| ||| ||||.|||||.||||||.||||.|||||.|||||||||||||.||||.|.||||.|.|
Sbjct 765 TCAGTGTCCGTCCA--TCACTGAGCATATCCCCCGAGAGCGGCTGTGCGATGCTGTGGATGTGTTACTGAGCTT 836
Query 1479 GAGAAATCCAGATGGAGGGTTCGCCACCTATGAGACCAAGCGTGGGGGGCACTTGCTGGAGCTGCTGAACCCCT 1552
|||.|||.|.|||||.||||||||.||||||||||..|||||||||||..||||||||||||||||||||||||
Sbjct 837 GAGGAATGCTGATGGCGGGTTCGCTACCTATGAGAAGAAGCGTGGGGGTTACTTGCTGGAGCTGCTGAACCCCT 910
Query 1553 CGGAGGTCTTCGGGGACATCATGATTGACTACACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCGCTTAAG 1626
|.||||||||.||.||||||||||||||||||||.|||||.|||||.|||||.||.|||||||||||.||.|||
Sbjct 911 CAGAGGTCTTTGGAGACATCATGATTGACTACACGTATGTAGAGTGTACCTCCGCTGTGATGCAGGCACTGAAG 984
Query 1627 TATTTCCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAGACCCTCACGCAGGGCTTAGAGTTCTG 1700
.|||||||..|.|..|||||.||..||||||||||.|||.||.||||||||||||..||.|||.|.||.|||||
Sbjct 985 CATTTCCATGAACACTTCCCAGACTACAGGGCAGCAGAGGTCAGGGAGACCCTCAATCAAGGCCTGGACTTCTG 1058
Query 1701 TCGGCGGCAGCAGAGGGCCGATGGCTCCTGGGAAGGCTCCTGGGGAGTTTGCTTCACCTACGGCACCTGGTTTG 1774
.||..||.|||||||.|||||||||||||||||.|||||||||||.|||||.||||||||||||||||||||||
Sbjct 1059 CCGAAGGAAGCAGAGAGCCGATGGCTCCTGGGAGGGCTCCTGGGGTGTTTGTTTCACCTACGGCACCTGGTTTG 1132
Query 1775 GCCTGGAGGCCTTCGCCTGTATGGGGCAGACCTACCGAGATGGGACTGCCTGTGCAGAGGTCTCCCGGGCCTGT 1848
||.||||.||.|||||.||.||||||||.|||||||.|||||||.||||.||||||||.||..|.|.||||||.
Sbjct 1133 GCTTGGAAGCGTTCGCTTGCATGGGGCATACCTACCAAGATGGGGCTGCTTGTGCAGAAGTAGCTCAGGCCTGC 1206
Query 1849 GACTTCCTGCTGTCCCGGCAGATGGCAGACGGAGGCTGGGGGGAGGACTTTGAGTCCTGCGAGGAGCGGCGTTA 1922
.|||||||.|||||||.|||||||||.||.|||||||||||.|||||||||||.||.||.||..|||||||.||
Sbjct 1207 AACTTCCTCCTGTCCCAGCAGATGGCGGATGGAGGCTGGGGAGAGGACTTTGAATCATGTGAACAGCGGCGGTA 1280
Query 1923 TGTGCAGAGTGCCCAGTCCCAGATCCATAACACATGCTGGGCCATGATGGGGCTGATGGCCGTTCGGCATCCTG 1996
||||||||||||...|||||||.||||||.|||.|||||||||.|||||||..|||||||.||..|||||||.|
Sbjct 1281 TGTGCAGAGTGCTAGGTCCCAGGTCCATAGCACCTGCTGGGCCCTGATGGGTTTGATGGCTGTCAGGCATCCCG 1354
Query 1997 ACATCGAGGCCCAGGAGAGAGGAGTCCGGTGTCTACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCAGGAA 2070
|||||...||.|||||||||||..||.|.|||||.||.|.|||.|||.|.||||||||.||||||||.|||||.
Sbjct 1355 ACATCACTGCTCAGGAGAGAGGGATCAGATGTCTGCTAGGGAAGCAGTTACCCAATGGAGACTGGCCTCAGGAG 1428
Query 2071 AACATTGCTGGGGTCTTCAACAAGTCCTGTGCCATCTCCTACACGAGCTACAGGAACATCTTCCCCATCTGGGC 2144
|||||..|||||||||||||||||||||||||||||..||||||.||.|||||.||||||||||||||||||||
Sbjct 1429 AACATCTCTGGGGTCTTCAACAAGTCCTGTGCCATCAGCTACACAAGTTACAGAAACATCTTCCCCATCTGGGC 1502
Query 2145 CCTCGGCCGCTTCTCCCAGCTGTACCCTGAGAGAGCCCTTGCTGGCCACCCC--- 2196
|||.||||||||||||.|.|||||.|||||.|...||||.||.||||| |
Sbjct 1503 CCTGGGCCGCTTCTCCAACCTGTATCCTGACAATACCCTCGCCGGCCA---CATT 1554
