Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06826
- Subject:
- XM_005253917.3
- Aligned Length:
- 1709
- Identities:
- 1096
- Gaps:
- 538
Alignment
Query 1 ATGGACGACCTCGACGCCCTGCTGGCGGACTTGGAGTCTACCACCTCCCACATCTCCAAACGGCCTGTGTTCTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTGCCGTGCCACCCCCCGTCC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCCCACCCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGACCCCTTAGACCAGTGGCAGCCCAGCGGCTCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CGATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAA 296
.|||||.|..
Sbjct 1 ----------------------------------------------------------------ATGTCTGCTC 10
Query 297 C--CCTCAGGACAGTGTTGGCTCTCCGTGCT--CCCGAGTGGGTGAGGAGGAGCACGTCTACAGCTTCCCCAAC 366
| |||| ||| |||..|||.||.|| |||| ||.| ||||.|
Sbjct 11 CTTCCTC--GAC-----TGGTCCTCAGTACTGCCCCG---GGCT------------------------CCCATC 50
Query 367 AAGCAGAAATCAGCTGAGCCTTCAC-CCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACC 439
.|| ||||..||| ||| ||| |.|..||| || |||.|||||.|||
Sbjct 51 GAG--GAAAGAAGC--------CACTCCA--GAAGGGAG-AC---------CAGAAACCTGTCT---------- 92
Query 440 GCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATGAGGCCAACTCAAGCCCC 513
|.||||| ||.||||||
Sbjct 93 -------------------------------------------CCTCCCT---------------TCCAGCCCC 108
Query 514 CCGCTTCCTGGGGCCCTGAGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAGGCAAAGCTGGGC- 586
| .|||||.|.||||..||.|.|| ||..||| |.||.|||...|.|||| ||...|||||||
Sbjct 109 C---------AGGCCCAGCGCCCGATCCAGGG---CCTGGAG-CAAAGAGCGGATGGGGA-GCGGTGCTGGGCG 168
Query 587 -CC--CTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGG----GGCCTGGAGGACGTGC-GGCCCAGTGTGG 652
|| ||| |||| |||.|.||.||.||| |.||.||||| || ||.|.|| ||
Sbjct 169 GCCGGCTG-----------GCCT---CGGGACGGCGGGCGGAGCAGCCCCGGAGG----GCAGGACGAG---GG 221
Query 653 A-GAGTCTCTTGGATGAACTGGA-GAG------CTCCGTGCCCAGCCCCGTCCCTGCCATCA------CTGTGA 712
| |.|.|||.||| ...||||| ||| ||.|.||.| .|||||| ||||
Sbjct 222 AGGGGGCTCCTGG--CCCCTGGAGGAGGTTGTACTTCTTGTC-------------TCCATCAGCTCATCTGT-- 278
Query 713 ACCAGG-GCGAGATGAGCAGCCCGCAGCGCGTCAC----CTCCACCCAACAGCAGACA-CGCATCTCG-GCCTC 779
||||| |.||||..||.|.||| |.||.| ||.| |||||| ||.|.|.|| |||||
Sbjct 279 -CCAGGAGGGAGAAAAGTACCCC------CATCCCTGTGCTGC---------CAGACACCGTACCCCGAGCCTC 336
Query 780 CTCTGCCACCAGGGAG--CTGGACGAGCTGATGGCTTCGCTGTCGGATTTCA-AGTTCATGGCCCAGGGGAAGA 850
.|||| || |||.||| ..|.||..|||| || |||||||||||||||||||||
Sbjct 337 -----------AGGAGTCCT-GACCAGC----CCCCTCCGTGTC------CACAGTTCATGGCCCAGGGGAAGA 388
Query 851 CAGGGAGCAGCTCACCCCCTGGGGGGCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAG 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 389 CAGGGAGCAGCTCACCCCCTGGGGGGCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAG 462
Query 925 TCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 463 TCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG 536
Query 999 GCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCG 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 GCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCG 610
Query 1073 GATCCCGGAACTTCTTCGAGCGGGATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGC 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 GATCCCGGAACTTCTTCGAGCGGGATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGC 684
Query 1147 TGCTACTACTGCAACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTT 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 685 TGCTACTACTGCAACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTT 758
Query 1221 CTTCTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCA 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 759 CTTCTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCA 832
Query 1295 AGGACTACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCC 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 AGGACTACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCC 906
Query 1369 CTCAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTTCTT 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 CTCAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTTCTT 980
Query 1443 CGAGCACGACGGGCAGCCCTACTGTGAGGTGCACTACCACGAGCGGCGCGGCTCGCTGTGTTCTGGCTGCCAGA 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 981 CGAGCACGACGGGCAGCCCTACTGTGAGGTGCACTACCACGAGCGGCGCGGCTCGCTGTGTTCTGGCTGCCAGA 1054
Query 1517 AGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTCTGTGCCTTCTGC 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 AGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTCTGTGCCTTCTGC 1128
Query 1591 CTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAGGCT 1664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1129 CTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCT 1202
Query 1665 CTTCTGC 1671
|||||||
Sbjct 1203 CTTCTGC 1209
