Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07008
Subject:
NM_011488.3
Aligned Length:
2383
Identities:
2155
Gaps:
5

Alignment

Query    1  ATGGCGGGCTGGATCCAGGCCCAGCAGCTGCAGGGAGACGCGCTGCGCCAGATGCAGGTGCTGTACGGCCAGCA  74
            ||||||||||||||.||||||||||||||.||||||||.||.||||||||||||||.|||.||||.||.|||||
Sbjct    1  ATGGCGGGCTGGATTCAGGCCCAGCAGCTTCAGGGAGATGCCCTGCGCCAGATGCAAGTGTTGTATGGGCAGCA  74

Query   75  CTTCCCCATCGAGGTCCGGCACTACTTGGCCCAGTGGATTGAGAGCCAGCCATGGGATGCCATTGACTTGGACA  148
            .||||||||||||||||||||||||.|||||||||||||.|||||||||||.||||||||.|||||||||||.|
Sbjct   75  TTTCCCCATCGAGGTCCGGCACTACCTGGCCCAGTGGATCGAGAGCCAGCCGTGGGATGCTATTGACTTGGATA  148

Query  149  ATCCCCAGGACAGAGCCCAAGCCACCCAGCTCCTGGAGGGCCTGGTGCAGGAGCTGCAGAAGAAGGCGGAGCAC  222
            |||||||||||.|||..||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATCCCCAGGACCGAGGTCAGGCCACCCAACTCCTGGAGGGCCTGGTGCAGGAGCTGCAGAAGAAGGCGGAGCAC  222

Query  223  CAGGTGGGGGAAGATGGGTTTTTACTGAAGATCAAGCTGGGGCACTACGCCACGCAGCTCCAGAAAACATATGA  296
            |||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||||||||.||.|||||
Sbjct  223  CAGGTGGGGGAAGATGGGTTTTTGCTGAAGATCAAGCTGGGGCACTATGCCACACAGCTCCAGAACACGTATGA  296

Query  297  CCGCTGCCCCCTGGAGCTGGTCCGCTGCATCCGGCACATTCTGTACAATGAACAGAGGCTGGTCCGAGAAGCCA  370
            ||||||.|||.||||||||||.|||||.|||||.||||||||||||||.||||||||||||||.||.|||||||
Sbjct  297  CCGCTGTCCCATGGAGCTGGTTCGCTGTATCCGTCACATTCTGTACAACGAACAGAGGCTGGTTCGCGAAGCCA  370

Query  371  ACAATTGCAGCTCTCCGGCTGGGATCCTGGTTGACGCCATGTCCCAGAAGCACCTTCAGATCAACCAGACATTT  444
            |||||||||||||.||.|||||..|||||||||||||||||||||||||||||||||||||||||||.|..|||
Sbjct  371  ACAATTGCAGCTCCCCTGCTGGTGTCCTGGTTGACGCCATGTCCCAGAAGCACCTTCAGATCAACCAAAGGTTT  444

Query  445  GAGGAGCTGCGACTGGTCACGCAGGACACAGAGAATGAGCTGAAGAAACTGCAGCAGACTCAGGAGTACTTCAT  518
            |||||||||||.|||.||||.||||||||.|||||.|||||||||||.|||||||||||.||.|||||||||||
Sbjct  445  GAGGAGCTGCGCCTGATCACACAGGACACGGAGAACGAGCTGAAGAAGCTGCAGCAGACCCAAGAGTACTTCAT  518

Query  519  CATCCAGTACCAGGAGAGCCTGAGGATCCAAGCTCAGTTTGCCCAGCTGGCCCAGCTGAGCCCCCAGGAGCGTC  592
            ||||||||||||||||||||||.|||||||||||||||||||||||||||.||||||||.||||||||||||..
Sbjct  519  CATCCAGTACCAGGAGAGCCTGCGGATCCAAGCTCAGTTTGCCCAGCTGGGCCAGCTGAACCCCCAGGAGCGCA  592

Query  593  TGAGCCGGGAGACGGCCCTCCAGCAGAAGCAGGTGTCTCTGGAGGCCTGGTTGCAGCGTGAGGCACAGACACTG  666
            |||||.|||||||||||||||||||||||||.|||||.||||||.|||||.|||||||.|||||||||||||||
Sbjct  593  TGAGCAGGGAGACGGCCCTCCAGCAGAAGCAAGTGTCCCTGGAGACCTGGCTGCAGCGAGAGGCACAGACACTG  666

Query  667  CAGCAGTACCGCGTGGAGCTGGCCGAGAAGCACCAGAAGACCCTGCAGCTGCTGCGGAAGCAGCAGACCATCAT  740
            |||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGCAGTACCGAGTGGAGCTGGCTGAGAAGCACCAGAAGACCCTGCAGCTGCTGCGGAAGCAGCAGACCATCAT  740

Query  741  CCTGGATGACGAGCTGATCCAGTGGAAGCGGCGGCAGCAGCTGGCCGGGAACGGCGGGCCCCCCGAGGGCAGCC  814
            ||||||.||||||||||||||||||||||||.|.||||||||||||||||||||.||.||||||||||||||||
Sbjct  741  CCTGGACGACGAGCTGATCCAGTGGAAGCGGAGACAGCAGCTGGCCGGGAACGGGGGTCCCCCCGAGGGCAGCC  814

Query  815  TGGACGTGCTACAGTCCTGGTGTGAGAAGTTGGCCGAGATCATCTGGCAGAACCGGCAGCAGATCCGCAGGGCT  888
            ||||||||||.||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGGACGTGCTGCAGTCCTGGTGTGAGAAGCTGGCCGAGATCATCTGGCAGAACCGGCAGCAGATCCGCAGGGCT  888

Query  889  GAGCACCTCTGCCAGCAGCTGCCCATCCCCGGCCCAGTGGAGGAGATGCTGGCCGAGGTCAACGCCACCATCAC  962
            ||||||||.||||||||||||||||||||.|||||.|||||||||||||||||.||||||||||||||||||||
Sbjct  889  GAGCACCTGTGCCAGCAGCTGCCCATCCCAGGCCCCGTGGAGGAGATGCTGGCTGAGGTCAACGCCACCATCAC  962

Query  963  GGACATTATCTCAGCCCTGGTGACCAGCACATTCATCATTGAGAAGCAGCCTCCTCAGGTCCTGAAGACCCAGA  1036
            ||||||.||||||||.|||||.||||||||.||||||||.||||||||||||||||||||||||||||||||||
Sbjct  963  GGACATCATCTCAGCTCTGGTCACCAGCACGTTCATCATCGAGAAGCAGCCTCCTCAGGTCCTGAAGACCCAGA  1036

Query 1037  CCAAGTTTGCAGCCACCGTACGCCTGCTGGTGGGCGGGAAGCTGAACGTGCACATGAATCCCCCCCAGGTGAAG  1110
            ||||||||||.||||||||.||||||||||||||.||.||||||||.|||||||||||.|||||.|||||||||
Sbjct 1037  CCAAGTTTGCGGCCACCGTGCGCCTGCTGGTGGGGGGAAAGCTGAATGTGCACATGAACCCCCCGCAGGTGAAG  1110

Query 1111  GCCACCATCATCAGTGAGCAGCAGGCCAAGTCTCTGCTTAAAAATGAGAACACCCGCAACGAGTGCAGTGGTGA  1184
            ||.|||||||||||.|||||||||||||||||.|||||.||.|||||||||||||||||.||||||||.||.||
Sbjct 1111  GCGACCATCATCAGCGAGCAGCAGGCCAAGTCCCTGCTCAAGAATGAGAACACCCGCAATGAGTGCAGCGGCGA  1184

Query 1185  GATCCTGAACAACTGCTGCGTGATGGAGTACCACCAAGCCACGGGCACCCTCAGTGCCCACTTCAGGAACATGT  1258
            |||||||||||||||.|||||.||||||||||||||.|||||.|||||.|||||.|||||||||||.|||||||
Sbjct 1185  GATCCTGAACAACTGTTGCGTCATGGAGTACCACCAGGCCACTGGCACGCTCAGCGCCCACTTCAGAAACATGT  1258

Query 1259  CACTGAAGAGGATCAAGCGTGCTGACCGGCGGGGTGCAGAGTCCGTGACAGAGGAGAAGTTCACAGTCCTGTTT  1332
            |||||||.||.||||||||.||.|||.||||.|||||||||||.|||||.||||||||||||||||||||||||
Sbjct 1259  CACTGAAAAGAATCAAGCGCGCCGACAGGCGTGGTGCAGAGTCGGTGACGGAGGAGAAGTTCACAGTCCTGTTT  1332

Query 1333  GAGTCTCAGTTCAGTGTTGGCAGCAATGAGCTTGTGTTCCAGGTGAAGACTCTGTCCCTACCTGTGGTTGTCAT  1406
            ||||||||||||||.|||||||||||.|||||.|||||||||||||||||.||||||||.||||||||.||.||
Sbjct 1333  GAGTCTCAGTTCAGCGTTGGCAGCAACGAGCTGGTGTTCCAGGTGAAGACCCTGTCCCTCCCTGTGGTCGTTAT  1406

Query 1407  CGTCCACGGCAGCCAGGACCACAATGCCACGGCTACTGTGCTGTGGGACAATGCCTTTGCTGAGCCGGGCAGGG  1480
            ||||||.||||||||||||||||||||.||.||.||.|||||||||||||||||||||||||||||||||||||
Sbjct 1407  CGTCCATGGCAGCCAGGACCACAATGCTACTGCCACCGTGCTGTGGGACAATGCCTTTGCTGAGCCGGGCAGGG  1480

Query 1481  TGCCATTTGCCGTGCCTGACAAAGTGCTGTGGCCGCAGCTGTGTGAGGCGCTCAACATGAAATTCAAGGCCGAA  1554
            ||||||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||.|||
Sbjct 1481  TGCCATTTGCTGTGCCTGACAAGGTGCTGTGGCCGCAGCTGTGTGAAGCGCTCAACATGAAATTCAAGGCTGAA  1554

Query 1555  GTGCAGAGCAACCGGGGCCTGACCAAGGAGAACCTCGTGTTCCTGGCGCAGAAACTGTTCAACAACAGCAGCAG  1628
            ||.|||||||||||||||.|||||||.||||||||||||||||||||.||||||||||||||||.||||||||.
Sbjct 1555  GTACAGAGCAACCGGGGCTTGACCAAAGAGAACCTCGTGTTCCTGGCACAGAAACTGTTCAACATCAGCAGCAA  1628

Query 1629  CCACCTGGAGGACTACAGTGGCCTGTCCGTGTCCTGGTCCCAGTTCAACAGGGAGAACTTGCCGGGCTGGAACT  1702
            ||||||.||||||||||...||.||||.|||||||||||||||||||||.|||||||||||||.||||||||||
Sbjct 1629  CCACCTCGAGGACTACAACAGCATGTCTGTGTCCTGGTCCCAGTTCAACCGGGAGAACTTGCCCGGCTGGAACT  1702

Query 1703  ACACCTTCTGGCAGTGGTTTGACGGGGTGATGGAGGTGTTGAAGAAGCACCACAAGCCCCACTGGAATGATGGG  1776
            |||||||||||||||||||.||||||||||||||||||.|||||||||||||.||||||||.||||||||||||
Sbjct 1703  ACACCTTCTGGCAGTGGTTCGACGGGGTGATGGAGGTGCTGAAGAAGCACCATAAGCCCCATTGGAATGATGGG  1776

Query 1777  GCCATCCTAGGTTTTGTGAATAAGCAACAGGCCCACGACCTGCTCATCAACAAGCCCGACGGGACCTTCTTGTT  1850
            ||.|||||.|||||.|||||.|||||||||||||||||||||||||||||||||||.||||||||||||.||.|
Sbjct 1777  GCTATCCTGGGTTTCGTGAACAAGCAACAGGCCCACGACCTGCTCATCAACAAGCCGGACGGGACCTTCCTGCT  1850

Query 1851  GCGCTTTAGTGACTCAGAAATCGGGGGCATCACCATCGCCTGGAAGTTTGATTCCCCGGAACGCAACCTGTGGA  1924
            ||||||.||||||||.||||||||||||||||||||.||.|||||||||||.||.|||||.||.|||||.||||
Sbjct 1851  GCGCTTCAGTGACTCGGAAATCGGGGGCATCACCATTGCTTGGAAGTTTGACTCTCCGGACCGAAACCTCTGGA  1924

Query 1925  ACCTGAAACCATTCACCACGCGGGATTTCTCCATCAGGTCCCTGGCTGACCGGCTGGGGGACCTGAGCTATCTC  1998
            |.|||||.||||||||.|||||.|||||||||||..||||||||||.|||||||||||||||||||.|||.||.
Sbjct 1925  ATCTGAAGCCATTCACGACGCGAGATTTCTCCATTCGGTCCCTGGCCGACCGGCTGGGGGACCTGAACTACCTT  1998

Query 1999  ATCTATGTGTTTCCTGACCGCCCCAAGGATGAGGTCTTCTCCAAGTACTACACTCCTGTGCTGGCTAAAGCTGT  2072
            |||||.|||||.||.|||||.||||||||.||||||||..|||||||.|||||||||||.||.||.|||||.||
Sbjct 1999  ATCTACGTGTTCCCAGACCGACCCAAGGACGAGGTCTTTGCCAAGTATTACACTCCTGTACTTGCGAAAGCAGT  2072

Query 2073  TGATGGATATGTGAAACCACAGATCAAGCAAGTGGTCCCTGAGTTTGTGAATGCATCTGCAGATGCTGGGGGCA  2146
            |||.|||||.|||||.|||||||||||||||||||||||||||||.||.||||||||..|||||||.||    |
Sbjct 2073  TGACGGATACGTGAAGCCACAGATCAAGCAAGTGGTCCCTGAGTTCGTCAATGCATCCACAGATGCCGG----A  2142

Query 2147  G-CAGCGCCACGTACATGGACCAGGCCCCCTCCCCAGCTGTGTGCCCCCAGGCTCCCTATAACATGTACCCACA  2219
            | |||||||||.||||||||||||||.||.|||||||..||||||||.||..|||.|||.|||||||||||||.
Sbjct 2143  GCCAGCGCCACCTACATGGACCAGGCTCCTTCCCCAGTCGTGTGCCCTCAACCTCACTACAACATGTACCCACC  2216

Query 2220  GAACCCTGACCATGTACTCGATCAGGATGGAGAATTCGACCTGGATGAGACCATGGATGTGGCCAGGCACGTGG  2293
            .||||||||||.|||.||.||.||.|||||.||.||.|||||||||||||.|||||||||.|||||||||||||
Sbjct 2217  CAACCCTGACCCTGTCCTTGACCAAGATGGCGAGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGCACGTGG  2290

Query 2294  AGGAACTCTTACGCCGACCAATGGACAGTCTTGACTCCCGCCTCTCGCCCCCTGCCGGTCTTTTCACCTCTGCC  2367
            |.|||||.||||||||.||.|||||||||||.|||.||||||||||.||.|||||.|||||.||||||||.||.
Sbjct 2291  AAGAACTTTTACGCCGGCCCATGGACAGTCTCGACGCCCGCCTCTCCCCACCTGCTGGTCTCTTCACCTCCGCT  2364

Query 2368  AGAGGCTCCCTCTCA  2382
            |||.|||||||.||.
Sbjct 2365  AGAAGCTCCCTGTCC  2379

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