Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07023
- Subject:
- XM_017315470.2
- Aligned Length:
- 1732
- Identities:
- 908
- Gaps:
- 653
Alignment
Query 1 ATGGCCAGCAGCGGCATG-GCT---GACAGCGCCAACCACCTGCCCTTCTTTTTCGGCAACATCACCCGGGAGG 70
||| ||||.|.| ||| ||||||||||||||||||.|||.||||||.|||||||||||||||||.|
Sbjct 1 ATG-------GCGGGAAGTGCTGTGGACAGCGCCAACCACCTGACCTACTTTTTTGGCAACATCACCCGGGAAG 67
Query 71 AGGCAGAAGATTACCTGGTCCAGGGGGGCATGAGTGATGGGCTTTATTTGCTGCGCCAGAGCCGCAACTACCTG 144
||||.|||||.||||||||||||||.|||||||..||||||||.||..||||.||||||||||||||.||||||
Sbjct 68 AGGCTGAAGACTACCTGGTCCAGGGAGGCATGACCGATGGGCTCTACCTGCTACGCCAGAGCCGCAATTACCTG 141
Query 145 GGTGGCTTCGCCCTGTCCGTGGCCCACGGGAGGAAGGCACACCACTACACCATCGAGCGGGAGCTGAATGGCAC 218
|||||.||.||..||||.|||||.|||...|||||||||||||||||||||||||||.||||.||.||||||||
Sbjct 142 GGTGGTTTTGCTTTGTCGGTGGCTCACAACAGGAAGGCACACCACTACACCATCGAGAGGGAACTTAATGGCAC 215
Query 219 CTACGCCATCGCCGGTGGCAGGACCCATGCCAGCCCCGCCGACCTCTGCCACTACCACTCCCAGGAGTCTGATG 292
||||||||||.||||.||||||.|||||||||||||.||.|||||||||||.||||||||||||||..||||||
Sbjct 216 CTACGCCATCTCCGGGGGCAGGGCCCATGCCAGCCCAGCAGACCTCTGCCATTACCACTCCCAGGAACCTGATG 289
Query 293 GCCTGGTCTGCCTCCTCAAGAAGCCCTTCAACCGGCCCCAAGGGGTGCAGCCCAAGACTGGGCCCTTTGAGGAT 366
||||..||||||||||.||||||||||||||||||||||..||.||.|||||||||||.||.|||||||||||.
Sbjct 290 GCCTTATCTGCCTCCTTAAGAAGCCCTTCAACCGGCCCCCGGGAGTACAGCCCAAGACCGGACCCTTTGAGGAC 363
Query 367 TTGAAGGAAAACCTCATCAGGGAATATGTGAAGCAGACATGGAACCTGCAGGGTCAGGCTCTGGAGCAGGCCAT 440
.|||||||.|||||||||||||||||||||||.|||||.||||||||.|||||.||||||||||||||.|||||
Sbjct 364 CTGAAGGAGAACCTCATCAGGGAATATGTGAAACAGACCTGGAACCTTCAGGGCCAGGCTCTGGAGCAAGCCAT 437
Query 441 CATCAGTCAGAAGCCTCAGCTGGAGAAGCTGATCGCTACCACAGCCCATGAAAAAATGCCTTGGTTCCATGGAA 514
||||||.||||||||.||||||||||||||||||||.|||||.||||||||.||.|||||.|||||||||||.|
Sbjct 438 CATCAGCCAGAAGCCCCAGCTGGAGAAGCTGATCGCCACCACGGCCCATGAGAAGATGCCCTGGTTCCATGGCA 511
Query 515 AAATCTCTCGGGAAGAATCTGAGCAAATTGTCCTGATAGGATCAAAGACAAATGGAAAGTTCCTGATCCGAGCC 588
|.|||||..|.||.|||||.|||||.|..|||||.|||||.||||||||.||||||||.|||||||||.|.|||
Sbjct 512 ACATCTCCAGAGATGAATCAGAGCAGACGGTCCTCATAGGGTCAAAGACCAATGGAAAATTCCTGATCAGGGCC 585
Query 589 AGAGACAACAACGGCTCCTACGCCCTGTGCCTGCTGCACGAAGGGAAGGTGCTGCACTATCGCATCGACAAAGA 662
||||||||||.|||||||||.||.|||||||||||||||||||||||.||..|||||||.|||||.||||..||
Sbjct 586 AGAGACAACAGCGGCTCCTATGCTCTGTGCCTGCTGCACGAAGGGAAAGTATTGCACTACCGCATTGACAGGGA 659
Query 663 CAAGACAGGGAAGCTCTCCATCCCCGAGGGAAAGAAGTTCGACACGCTCTGGCAGCTAGTCGAGCATTATTCTT 736
||||||.||||||||||||||.||.|||||.||||||||.|||||.||||||||||||||.||.|||||.||||
Sbjct 660 CAAGACCGGGAAGCTCTCCATTCCTGAGGGGAAGAAGTTTGACACCCTCTGGCAGCTAGTGGAACATTACTCTT 733
Query 737 ATAAAGCAGATGGTTTGTTAAGAGTTCTTACTGTCCCATGTCAAAAAATCGGCACACA-ATAGGGG-------G 802
|.||..|||||||..|..|||||||.||.||.||.|||||.|||||.||.||..|||| || ||| |
Sbjct 734 ACAAGCCAGATGGGCTACTAAGAGTCCTCACGGTACCATGCCAAAAGATTGGTGCACAGAT--GGGCCACCCAG 805
Query 803 GTAGCTACCTGTAATATAAAATGATTTAAGTTATCTGATCCTGTCTGAAGGGATGGGTGTAGCCGGTCCCACTC 876
|.||| || ||||| |..||||.| ||| |
Sbjct 806 GAAGC--CC---------AAATG-----------CCCATCCCG--TGA-------------------------C 830
Query 877 TTTGTCCACAACCTTATGGTGTTTTATAACAGGGCCAGGAATTAATTCGAATC----GGTTCAAGCTCCCTGCT 946
||.||| ||.||| .||||| |||| ||.||||
Sbjct 831 TTGGTC----------------------ACCGGG--TGGAAT-------AATCTCAAGGATCAA---------- 863
Query 947 TTCCCATACTATATGTTTAAATTTATATTTTTCTTTCCC----CCTGACCTGACCGAATTTTTCCCATCGCGAT 1016
||.||| .||.||||| ||||.|| ||..|| ..|||.|..||
Sbjct 864 -----ATCCTA-------------------CTCCTTCCCAAAGCCTGGCC--ACAAAA-----AGCATGGAAAT 906
Query 1017 CTAATTCTCCCCCGCTTAATACTGACGCTCTCGCACCCATCTCTCTCCTTCTAGCCTCCGCTAGTCAAAAGTTT 1090
..| || ||||| ||| .||.||| ||| |||
Sbjct 907 GAA----------GC-----ACTGA-GCT---ACATCCA--------CTT----------------AAA----- 932
Query 1091 TGGAGTACTCACCAGTCGCCGCCCCTCGCCTCTTGCCGTGCGCGCTTCAGCAAGCCGAGTCCTGCGTCGAGAGA 1164
||..|.|| ||||| ||| |||| .||| .|||
Sbjct 933 --GAAGAATC-CCAGT-----------------------------TTC--CAAG-GGAG--GTGC--------- 960
Query 1165 GCTCCTTTGGTTTCCCTTTCGCTTTCAAGTCCCTGTTCGGGCGCCAATGCTAGAGATTTTCCACA--------- 1229
||..|||| |||.|||..||.||| |.|||| ||.|
Sbjct 961 -CTGTTTTG---TCCTTTTGTCTGTCA-----------------------TCGAGA-----CATAGGGGTAGCT 1002
Query 1230 -CTGACTAAAAGGGTCTGAGGGATCTCTAGTTACCAGAGTCACACAACAGACGGGCACACACTACTTGAAGCAC 1302
|||.|||...||||.||| |||.||
Sbjct 1003 CCTGTCTATCTGGGTGTGA-----------------------------------------ACTCCT-------- 1027
Query 1303 TCAAGGCAAGCTTTATTGAGGCTTAAGCAGTGGGTTCCCTAGTTAGCCAGAGAGCTCCCAGGCTCAGATCTGGT 1376
||.||| |||| ..||.|||.| |||.||||| |.||| |.|.|||| .
Sbjct 1028 TCCAGG--AGCT---GGGATGCTCA------GGGGTCCCT--------------CCCCC---CACTGATC---C 1070
Query 1377 CTAACCAGAGAGACCCGTTTATGTATCGAGCTAGGCACTT----AAATACAATATCTGTGCAATGCGGCAATTC 1446
||| .|.||..||.||.|| || |.||.|| ||| ||| |||
Sbjct 1071 CTA-------CGTCCTTTTGATATA-----CT-GCCATTTTTTAAAA--------CTG------------ATT- 1110
Query 1447 AGTGGTTCGTCCAATCCATGTCAGACCCGTCAGTTGCCTTCCTAATAAGGCACGATCGTACCACCTTACTTCCA 1520
|||
Sbjct 1111 ---------TCC-------------------------------------------------------------- 1113
Query 1521 CCAATCGGCATGCACGGTGCTTTTTCTCTCCTTGGAAGGCATGTTGCTAACTCATCGTTACCATGTTGCAAGAC 1594
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1595 TACAAGAGTAATGCATAAGACTACATTAAGCTGGCAGCTCCAGCTTTTGTTCCCTTTAGTGAGGGTAAATGCGC 1668
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1669 GCTGGCGATCATTACCCCGGCGTGGTGAAC 1698
Sbjct 1114 ------------------------------ 1113
