Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07088
- Subject:
- NM_001276699.2
- Aligned Length:
- 1186
- Identities:
- 543
- Gaps:
- 632
Alignment
Query 1 ATGGAGGAGCCGCAGTCAGATCCTAGCGTCGAGCCCCCTCTGAGTCAGGAAACATTTTCAGACCTATGGAAACT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ACTTCCTGAAAACAACGTTCTGTCCCCCTTGCCGTCCCAAGCAATGGATGATTTGATGCTGTCCCCGGACGATA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTGAACAATGGTTCACTGAAGACCCAGGTCCAGATGAAGCTCCCAGAATGCCAGAGGCTGCTCCCCGCGTGGCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CCTGCACCAGCAGCTCCTACACCGGCGGCCCCTGCACCAGCCCCCTCCTGGCCCCTGTCATCTTCTGTCCCTTC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCAGAAAACCTACCAGGGCAGCTACGGTTTCCGTCTGGGCTTCTTGCATTCTGGGACAGCCAAGTCTGTGACTT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GCACGTACTCCCCTGCCCTCAACAAGATGTTTTGCCAACTGGCCAAGACCTGCCCTGTGCAGCTGTGGGTTGAT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TCCACACCCCCGCCCGGCACCCGCGTCCGCGCCATGGCCATCTACAAGCAGTCACAGCACATGACGGAGGTTGT 518
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ---------------------------------ATGGCCATCTACAAGCAGTCACAGCACATGACGGAGGTTGT 41
Query 519 GAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAGCGATGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 42 GAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAGCGATGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGG 115
Query 593 AAGGAAATTTGCGTGTGGAGTATTTGGATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 116 AAGGAAATTTGCGTGTGGAGTATTTGGATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCG 189
Query 667 CCTGAGGTTGGCTCTGACTGTACCACCATCCACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 190 CCTGAGGTTGGCTCTGACTGTACCACCATCCACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAA 263
Query 741 CCGGAGGCCCATCCTCACCATCATCACACTGGAAGACTCCAGTGGTAATCTACTGGGACGGAACAGCTTTGAGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 264 CCGGAGGCCCATCCTCACCATCATCACACTGGAAGACTCCAGTGGTAATCTACTGGGACGGAACAGCTTTGAGG 337
Query 815 TGCGTGTTTGTGCCTGTGCTGGGAGAGACCGGCGCACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTCAC 888
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 338 TGCGTGTTTGTGCCTGTCCTGGGAGAGACCGGCGCACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTCAC 411
Query 889 CACGAGCTGCCCCCAGGGAGCACTAAGCGAGCACTGCCCAACAACACCAGCTCCTCTCCCCAGCCAAAGAAGAA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 CACGAGCTGCCCCCAGGGAGCACTAAGCGAGCACTGCCCAACAACACCAGCTCCTCTCCCCAGCCAAAGAAGAA 485
Query 963 ACCACTGGATGGAGAATATTTCACCCTTCAGATCCGTGGGCGTGAGCGCTT-CGA-GATGTT-----CCGAGAG 1029
|||||||||||||||||||||||||||||||||.| ..|.||| ||| ||| |.|||| |.||.|
Sbjct 486 ACCACTGGATGGAGAATATTTCACCCTTCAGATGC---TACTTGA---CTTACGATGGTGTTACTTCCTGATA- 552
Query 1030 CTGAATGAGGCCTTGGAACTCAAGGATGCCCAGGCTGGGAAGGAGCCAGGGGGGAGCAGGGCTCACTCCAGCCA 1103
|||||...|
Sbjct 553 ----------------AACTCGTCG------------------------------------------------- 561
Query 1104 CCTGAAGTCCAAAAAGGGTCAGTCTACCTCCCGCCATAAAAAACTCATGTTCAAGACAGAAGGGCCTGACTCAG 1177
Sbjct 562 -------------------------------------------------------------------------- 561
Query 1178 AC 1179
Sbjct 562 -- 561