Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07177
- Subject:
- XM_005259215.4
- Aligned Length:
- 2145
- Identities:
- 1379
- Gaps:
- 555
Alignment
Query 1 ATGACCACGTTCAAGGAGGCAATGACCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAAGAGCTGGGGCTGCT 74
||||||||.||||||||||||.|||||||||||||.|||||||||||||||||||||||.||||||||||||||
Sbjct 1 ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT 74
Query 75 GGACCTTGCTCAGAGGAAGCTGTATCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGACATC 148
|||||.|||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 75 GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC 148
Query 149 AAGCATTCCACAGGGATACTTTCCACTTCCTAAGGGAAGAAAAGATTTGGATGATGAAGACAGCAATCCAAAGG 222
||.|.||||||...|||||||.||||||||||||||||||||||.|||||||||||..||||||||.||||||.
Sbjct 149 AACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGA 222
Query 223 GAAGGGAATTCAGGAGACAAGATCCAAACTGAGATGGAGACTGTTTCAGAAGCAGGAACACATCAAGAGTGGTC 296
||||||||||||||||.||||||||||||||||.|||||.|||||.|||||||||||.|||||.||||||||||
Sbjct 223 GAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTC 296
Query 297 CTTCCAGCAAATCTGGGAAAAAATTGCAAGTGATTTAACCAGGTCTCAAGACTTGGTGATAAATAGCTCTCAGT 370
||.||||||||||||||||.|||||||||..||.||||||||||||||.||||...|.|||||||.||||||||
Sbjct 297 CTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCTCAGT 370
Query 371 TCTCCAAAGAAGGTGATTTCCCCTGCCAGACTGAGGCAGGACTATCTGTAATTCACACAAGACAGAAATCTTCC 444
|||...||.|.||||||.||||||.||||..|||.|||||||||.|...||||||.|||.||||||||.|||||
Sbjct 371 TCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCATACAGGACAGAAACCTTCC 444
Query 445 CAGGGCAATGG---ATATAAACCATCCTTCAGTGATGTCTCCC-TCTTTGATTTTCATCAACAATTACACTCAG 514
||||| ||| .|.|||||..|||.|||||||||| |||| ||||||||.|||.|||.||.|||.||||||
Sbjct 445 CAGGG---TGGGAAGTGTAAACAGTCCATCAGTGATGT-TCCCATCTTTGATCTTCCTCAGCAGTTATACTCAG 514
Query 515 GAGAGAAATCTCATACGTGTGATGAGTGTGGAAAGAACTTTTGTTACATCTCAGCCCTTCGTATTCATCAGAGA 588
.||||||.|||.||||.|||||||||||||||||.|.|.|.||||||||||||||.||||.|.|||||||||||
Sbjct 515 AAGAGAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCATCAGAGA 588
Query 589 GTCCACATGGGAGAGAAATGCTATAAGTGTGACGTGTGTGGTAAGGAATTCAGTCAGAGTTCACATCTGCAAAC 662
||||||.|||||||||||..||.||.||||||.||||||||.||||||||.|||||.||.||||||||||||||
Sbjct 589 GTCCACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCTGCAAAC 662
Query 663 TCATCAGAGAGTCCACACTGGAGAGAAACCGTTCAAATGTGTGGAATGTGGGAAAGGCTTCAGTCGTAGATCAG 736
||||||||||||||||||||||||||||||.||||||||||.|.|||||||||||||.||||||||||||||||
Sbjct 663 TCATCAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAG 736
Query 737 CACTTAATGTTCATCACAAATTACACACAGGAGAGAAACCTTATAATTGTGAGGAATGCGGGAAGGCCTTCATT 810
|||||||||||||||..||||||||||||||||||||||||||.|.||||||||.|||.|||||||||||||||
Sbjct 737 CACTTAATGTTCATCGTAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTCATT 810
Query 811 CACGATTCCCAGCTTCAAGAACATCAGAGAATCCATACGGGGGAGAAGCCATTCAAATGTGATATATGTGGTAA 884
||.||||||||||||.|.||||||.|||||||||||||.||||||||.||||||||||||||||||||||||||
Sbjct 811 CATGATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATATGTGGTAA 884
Query 885 GAGCTTCTGTGGTAGATCAAGACTTAATAGGCATTCCATGGTTCACACGGCAGAGAAACCATTCCGATGTGATA 958
||.|||||.|..|||.|||||||||||.||.|||||||||||||||||.|.|||.||||||||..|.|||||||
Sbjct 885 GACCTTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGTGTGATA 958
Query 959 CGTGTGATAAGAGCTTTCGTCAGAGATCAGCACTTAATAGTCATCGCATGATCCACACAGGAGAGAAACCATAC 1032
|.||||||||||||||||.|||||||||||||||||||||.|||.|||||.|||||||||||||||||||.|||
Sbjct 959 CATGTGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAACCGTAC 1032
Query 1033 AAATGTGAGGAGTGTGGAAAAGGCTTTATTTGTAGGCGAGATCTTTATACGCATCATATGGTCCACACGGGAGA 1106
|.|||||||.||||||||||||||||||||.||||||.||||.||||||.||||||..||||||||||.|||||
Sbjct 1033 AGATGTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACACAGGAGA 1106
Query 1107 AAAGCCATATAATTGTAAAGAGTGTGGGAAGAGCTTCAGATGGGCCTCGTGTCTTTTGAAACATCAGCGAGTCC 1180
|||.|||||||||||||||||.|||||||||||||||||||||.||||.||.||||||||.|||||||||||||
Sbjct 1107 AAAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGCGAGTCC 1180
Query 1181 ACAGTGGAGAAAAACCATTCAAATGTGAAGAATGTGGGAAAGGATTTTACACAAATTCACAA-TGCTATTCCCA 1253
||||||||||||||...||||||||||||||||||||.||.||||||||.|||||||||||| || |.||||||
Sbjct 1181 ACAGTGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGAAAGGGATTTTATACAAATTCACAACTG-TCTTCCCA 1253
Query 1254 CCAGAGATCCCATAGTGGAGAAAAACCATACAAATGTGTGGAGTGTGGGAAGGGC-----TACAAAAGGAGGTT 1322
.|||||||||||.|||||.|||||.|||||.|||||||.|||||||||||||||| |||.|| |||
Sbjct 1254 TCAGAGATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTATGTTACTAA-----GTT 1322
Query 1323 GGATCTTGACTTTCACCAGCGCGTCCATACAGGAGAGAAACTGTATAATTGTAAGGAATGTGGGAAGAGCTTTA 1396
..||||||||||.||||||.|.|||||.||.|||||||.||..|||||||||||||||||||||||||.|||||
Sbjct 1323 TAATCTTGACTTGCACCAGAGGGTCCACACGGGAGAGAGACCTTATAATTGTAAGGAATGTGGGAAGAACTTTA 1396
Query 1397 GTCGGGCCCCATGTCTTTTGAAACATGAGAGACTCCACAGTG---GAGAAAAACCATTCCAATGTGAAGAGTGT 1467
|.||||||.||.||.|||||||.|||.||||||||||| || || |||||||||||.|||||||.||.|||
Sbjct 1397 GCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCAC--TGCCAGA-AAAAACCATTCAAATGTGAGGACTGT 1467
Query 1468 GGGAAGAG--ATTTACTCAAAATTCACATCTTCATTCCCATCAGAGAGTTCACACTGGAGAAAAGCCATACAAA 1539
||.||||| .|.|||.||..| ||.|.|.|.|...|||.|.|||||...|.|.|||.|||||.||||.||||
Sbjct 1468 GGAAAGAGGCTTGTACACAGGA--CATACCGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCATCCAAA 1539
Query 1540 TGTGAGAAGTGTGGAAAGGGCTACAATAGTAAGTTTAATCTTGATATGC----ACCAGAAGGTC-----CACAC 1604
||||||.|.|||||.|...|||||||.||....||.|||||.|||||.| |.||..|..|| .||||
Sbjct 1540 TGTGAGGATTGTGGGAGACGCTACAAGAGGCGCTTGAATCTGGATATACTTTTATCATTATTTCTAAATGACAC 1613
Query 1605 AGGAGAGAGACCATACAATTGTAAGGAATGTGGGAAGAGCTTTGGCTGGGCCTCGTGTCTTTTGAAACATCAGA 1678
|
Sbjct 1614 A------------------------------------------------------------------------- 1614
Query 1679 GACTGCACAGTGGAGAAAAACCATTCAAATGTGAAGAGTGTGGGAAAAGATTTACTCAGAATTCACAGCTTCAT 1752
Sbjct 1615 -------------------------------------------------------------------------- 1614
Query 1753 TCTCATCAAAGAGTGCACACTGGAGAAAAGCCATACAAATGTGATGAGTGTGGGAAGGGCTTCAGCTGGTCCTC 1826
Sbjct 1615 -------------------------------------------------------------------------- 1614
Query 1827 AACTCGTCTGACCCATCAGAGACGCCACAGCAGAGAAACACCTCTCAAATGTGAGCAGCATGGGAAGAACATTG 1900
Sbjct 1615 -------------------------------------------------------------------------- 1614
Query 1901 TACAGAATTCATTCTCTAAAGTGCAAGAAAAAGTTCACAGTGTAGAAAAGCCATACAAATGTGAGGACTGTGGG 1974
Sbjct 1615 -------------------------------------------------------------------------- 1614
Query 1975 AAGGGCTACAACAGGCGCTTGAATCTTGATATGCATCAGAGGGTCCACATGGGAGAGAAAACATGGAAGTGTAG 2048
Sbjct 1615 -------------------------------------------------------------------------- 1614
Query 2049 GGAGTGTGATATGTGCTTTAGTCAGGCCTCAAGCCTTCGACTTCATCAGAATGTTCATGTTGGAGAAAAACCT 2121
Sbjct 1615 ------------------------------------------------------------------------- 1614