Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07247
- Subject:
- XM_006529849.3
- Aligned Length:
- 3567
- Identities:
- 1197
- Gaps:
- 2250
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTGAGGTGATGCCCACAATCAATGAGGGGGACCCCCTGGGGCCCCCCCACGGTGCCGATGCTGAGGCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTGAGCAGCTGATGGTGAACATGCTGGATGAGCGAGAGAAGTTGCTGGAGTCCCTTCGGGAGAGTCAGGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTTGGTAGCCACACAGAGCCGGCTCCAGGATGCCCTTCACGAGCGAGATCAGCTCCAGCGCCACCTGAACTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCTTCCCCAGGAATTTGCCACTTTAACTCGGGAGCTAAGCATGTGTCGGGAGCAGCTTCTGGAGCGGGAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAGATATCTGAGCTGAAAGCAGAGCGGAATAACACAAGGCTGCTTCTGGAACATCTGGAATGCCTCGTGTCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATGAGCGGTCATTGCGGATGACAGTGGTAAAACGGCAGGCCCAATCACCTTCAGGTGTCTCCAGTGAGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGGTGCTGAAGGCCCTCAAGTCACTATTTGAGCACCACAAGGCCCTGGATGAGAAGGTGCGAGAGCGGCTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCAGCTCTAGAGCGCGTTACTACCTTGGAGGAGCAGTTGGCAGGAGCTCACCAGCAGGTATCTGCCCTGCAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGGTGCAGGAATTCGGGATGGAGTAGCAGAAGAGGAAGGGACTGTGGATCTGGGACCAAAACGCCTGTGGAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGACACTGGCCGCGTGGAAGAGCTGCAAGGACTCTTGGAGAAGCAAAACTATGAGTTGAGCCAGGCCCGTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCGGCTGGTCACCCTGAGTGCCACCGTGACTGAGCTGGAGGAGGACCTGGGCACGGCCCGCCGAGACCTCATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTCAGAGGAGCTGAGCAGCAAGCATCAGCGGGACCTCCGAGAGGCTCTGGCTCAGAAGGAGGACATGGAAGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGAATCACCACACTGGAGAAGCGCTACTTGGCTGCTCAGCGAGAAGCCACATCCATCCATGACCTCAATGACAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTGGAGAATGAGCTGGCCAACAAGGAATCCCTGCACCGCCAGTGTGAGGAGAAAGCCCGGCATCTGCAGGAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCTAGAAGTAGCAGAGCAGAAGTTGCAGCAGACCATGCGCAAGGCAGAGACTCTGCCCGAGGTGGAGGCTGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGTCTCAGAGAATCGCAGCCCTCACCAAGGCTGAGGAACGTCATGGCAACATTGAGGAACATCTGCGGCAGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAAGGGCAGCTGGAAGAGAAGAACCAGGAGCTGGCAAGGGTGCGCCAGCGGGAGAAGATGAATGAAGACCACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAAGCGGCTGTCAGACACCGTGGACCGGTTGCTTAGTGAGTCCAACGAACGCCTGCAGCTCCACCTCAAGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGAATGGCTGCCCTGGAGGAGAAGGGCCGTCTGTCTGAAGAGATTGAGAAGCTGCGCCAAGAGGTGGACCAGCT 1406
Query 1 -------------------------------------------------ATGGGCAGTGCAGCAGACGTGCGGT 25
.|||||||.||||||||.|||.|||
Sbjct 1407 GAAGGGTCGAGGGGGGCCGTTTGTGGATGGCATCCACTCCAGGTCACACGTGGGCAGCGCAGCAGATGTGAGGT 1480
Query 26 TCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCTGCC 99
||||.|||.|.|||.||||||||||.||||||||..|||||||.|||||.|||||..|||||||.||.||||||
Sbjct 1481 TCTCACTGAGTACAGCCACACACGCGCCCCCAGGTCTGCATCGACGCTATTCGGCGCTGAGGGATGAATCTGCC 1554
Query 100 AAGGACTGGGAGACTTCTCCACTGCCTGGGATGCTGG------CCCCGGCAGCTGGCCCTGCCTTTGACAGTGA 167
|||||||||.||.|.||.||||||||.|||.||.||| ||.|| |||||||||||||||||
Sbjct 1555 AAGGACTGGAAGCCATCGCCACTGCCAGGGGTGTTGGGCGCCACCACG---------CCTGCCTTTGACAGTGA 1619
Query 168 CCCTGAGATCTCCGACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGCTCT---GCGGATGTTGTCTCCCCCA 238
||||||||||||.||.|||||||||||||||||.|||||..||||||||.|| |..|||||..||||.|||.
Sbjct 1620 CCCTGAGATCTCTGATGTGGATGAGGATGAGCCTGGGGGCTTGGTGGGCACTCAGGTCGATGTCATCTCACCCG 1693
Query 239 GCGGCCACTCAGATGCCCAGACCCTGGCCATGATGCTGCAGGAGCAGCTGGATGCCATCAATGAGGAAATCAGG 312
|.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||..||||.||||||
Sbjct 1694 GTGGCCATTCAGATGCCCAGACCCTGGCCATGATGCTACAGGAGCAGCTGGATGCCATCAACCAGGAGATCAGG 1767
Query 313 ATGATTCAGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCAT 386
|||||.|||||.||||||||||||||.|||||.||.||.||||||||||||||.|||||.|||||.||||||||
Sbjct 1768 ATGATCCAGGAGGAGAAGGAGTCCACTGAGCTTCGAGCTGAGGAGATTGAGACCCGTGTGACCAGCGGCAGCAT 1841
Query 387 GGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCA 460
|||.|||||.|||||||..|||||||||||||||||.||.|||||||||||||||||.|||||.||||||||||
Sbjct 1842 GGAGGCCCTCAACCTGACCCAGCTGCGCAAGCGTGGCTCTATCCCCACCTCTCTGACCGCCCTTTCCCTGGCCA 1915
Query 461 GCGCGTCCCCACCACTCAGCGGCCGCTCCACACCTAAGCTCACCTCCCGCAGTGCTGCCCAGGACCTGGACCGA 534
|.||.||.|||||.|||||.||||||||||||||.||||||||.|||||.||||||||||||||.|||||||||
Sbjct 1916 GTGCATCTCCACCGCTCAGTGGCCGCTCCACACCCAAGCTCACTTCCCGAAGTGCTGCCCAGGATCTGGACCGA 1989
Query 535 ATGGGGGTCATGACCCTGCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGA 608
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1990 ATGGGGGTCATGACCCTGCCCAGCGACTTAAGAAAGCATAGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGA 2063
Query 609 GAACCGAGAGGATAAAGCCACCATAAAATGTGAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAGAGA 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2064 GAACCGAGAGGATAAAGCCACCATAAAATGTGAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAGAGA 2137
Query 683 AGCTTGGCCACCCAGCCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGATCAGGGCAGCAACCCCAGCAGC 756
|||||||||||||.|.||||||.||.||.||.|||||||||||||||||||.|||||.||||||||||||||||
Sbjct 2138 AGCTTGGCCACCCTGGCCTGAGTCAAGAGGAGGGCAAGAGTGCCTTGGAGGGTCAGGACAGCAACCCCAGCAGC 2211
Query 757 AGCAACAGCAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGAAAGGGCATCAAGTCGTCCATTGGCCGCCTGTT 830
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 2212 AGCAACAGCAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCATCCATTGGCCGCCTGTT 2285
Query 831 TGGGAAGAAGGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGACT 904
||||||||||||||||||||||||||||||||||||||||||| |||||.||||||||||||||.|||||||
Sbjct 2286 TGGGAAGAAGGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGAT---GCCACGGGCCATGTTCTGCTCACAGACT 2356
Query 905 CCGAATTCAGTATGCAGGAGCCTATGGTGCCTGCCAAGCTGGGGACCCAGGCAGAGAAGGACCGGCGGCTAAAG 978
||||..|||||.|||||||.||.|||||.|||||.|||.||||||||||||||||||||||||||||.||.||.
Sbjct 2357 CCGAGCTCAGTCTGCAGGAACCAATGGTACCTGCTAAGTTGGGGACCCAGGCAGAGAAGGACCGGCGACTGAAA 2430
Query 979 AAGAAACACCAGCTGCTTGAAGATGCCAGCAGGAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTACTGTGGT 1052
||||||||||||||||||||||||||..||.|.||||||||||||||||||||.||||||||.||.||.|||||
Sbjct 2431 AAGAAACACCAGCTGCTTGAAGATGCGCGCCGAAAAGGAATGCCCTTTGCCCAATGGGATGGCCCCACGGTGGT 2504
Query 1053 CTCCTGGTTGGAGCTCTGGGTGGGGATGCCTGCCTGGTATGTGGCAGCCTGCCGGGCCAACGTCAAGAGTGGTG 1126
|||||||.|||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|
Sbjct 2505 CTCCTGGCTGGAGCTCTGGGTGGGGATGCCTGCCTGGTATGTGGCGGCCTGCCGGGCCAATGTCAAGAGTGGCG 2578
Query 1127 CCATCATGTCCGCTCTGTCGGACACAGAGATCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACCGGCTCAAG 1200
|||||||||||||..||||||||||.|||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 2579 CCATCATGTCCGCCTTGTCGGACACGGAGATCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACAGGCTCAAG 2652
Query 1201 CTCCGCCTGGCCATTCAGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCACCCACCTCCAGGACTTCTTCTGG 1274
||||||||||||||.|||||||||||||||.||||.||||||||.||.|||||.|||||||||||||||||.||
Sbjct 2653 CTCCGCCTGGCCATCCAGGAGATGGTGTCACTGACGAGCCCCTCAGCTCCACCTACCTCCAGGACTTCTTCAGG 2726
Query 1275 GAATGTCTGGGTCACCCATGAAGAGATGGAAACTCTGGAAACATCTACTAAAACAGACAGTGAGGAGGGCAGCT 1348
||||||||||||.|||||.|||||||||||||||||||.|||||||||.||||||
Sbjct 2727 GAATGTCTGGGTGACCCACGAAGAGATGGAAACTCTGGCAACATCTACCAAAACA------------------- 2781
Query 1349 GGGCTCAGACCCTGGCCTATGGGGACATGAACCATGAGTGGATTGGGAATGAATGGCTACCCAGCCTGGGGCTC 1422
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 1423 CCGCAGTACCGCAGCTACTTCATGGAGTGCCTGGTGGACGCCCGCATGCTGGACCACCTCACCAAGAAGGACCT 1496
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 1497 GCGGGTCCACCTGAAGATGGTGGACAGCTTCCATCGAACCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGC 1570
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 1571 TGAATTATGACCGGAAGGAGCTGGAGAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTGG 1644
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 1645 ACCAACGACCAGGTGGTTCATTGGGTCCAGTCTATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAGAGTGG 1718
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 1719 TGTGCATGGAGCCTTGCTGGCCCTGGACGAGAACTTCGACCACAACACACTGGCCCTGATCCTCCAGATCCCCA 1792
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 1793 CACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACCGGAAG 1866
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 1867 CTGGATGACGGGGATGACAAGGTGTTTCGCCGCGCGCCCTCCTGGAGGAAGCGCTTCCGGCCGCGGGAGCACCA 1940
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 1941 CGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGACCCTCCCGGCGGGCTTCCGTGTGTCCACCCTGGGGACCC 2014
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 2015 TGCAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCTGAAGCTCACTCCCACTATCTCTACGGACACATGCTC 2088
Sbjct 2782 -------------------------------------------------------------------------- 2781
Query 2089 TCCGCCTTCCGGGAC 2103
Sbjct 2782 --------------- 2781
