Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07315
Subject:
NM_001206897.1
Aligned Length:
1559
Identities:
1362
Gaps:
187

Alignment

Query    1  ATGACTTCCAGCAAGCTAGAGATGCCCGGCGAG-GTGAAGGCCGACCCCGCCGCCCTCATGGCGTCGCTGCACC  73
            ||||               |||..|      || ||||     |||             ||  .|.|.|..|..
Sbjct    1  ATGA---------------AGAATC------AGTGTGA-----GAC-------------TG--TTTGGTTAAAA  33

Query   74  TCCTGCCGTCGCCCACGCCCAAT----CTCGAAATTAAGTACACCAAGATCTTTATAAACAACGAGTGGCAGAA  143
            ||               ||||||    || ||||.|           |||||||||||||||||||||||||||
Sbjct   34  TC---------------CCCAATAAAACT-GAAACT-----------GATCTTTATAAACAACGAGTGGCAGAA  80

Query  144  CTCAGAGAGTGGGAGAGTGTTCCCTGTCTATAATCCAGCCACAGGAGAACAGGTGTGTGAAGTTCAAGAAGCAG  217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   81  CTCAGAGAGTGGGAGAGTGTTCCCTGTCTATAATCCAGCCACAGGAGAACAGGTGTGTGAAGTTCAAGAAGCAG  154

Query  218  ACAAGGCAGATATAGACAAAGCAGTGCAGGCAGCCCGCCTGGCTTTCTCTCTTGGTTCAGTGTGGAGAAGGATG  291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  155  ACAAGGCAGATATAGACAAAGCAGTGCAGGCAGCCCGCCTGGCTTTCTCTCTTGGTTCAGTGTGGAGAAGGATG  228

Query  292  GATGCTTCAGAAAGGGGACGTCTGTTGGATAAGCTTGCAGACTTGGTGGAACGGGACAGGGCAGTTCTTGCAAC  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  229  GATGCTTCAGAAAGGGGACGTCTGTTGGATAAGCTTGCAGACTTGGTGGAACGGGACAGGGCAGTTCTTGCAAC  302

Query  366  CATGGAATCCCTAAATGGTGGCAAACCATTCCTGCAAGCTTTTTATGTGGATTTGCAGGGCGTCATCAAAACCT  439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  303  CATGGAATCCCTAAATGGTGGCAAACCATTCCTGCAAGCTTTTTATGTGGATTTGCAGGGCGTCATCAAAACCT  376

Query  440  TTCGATATTACGCAGGCTGGGCTGATAAAATTCATGGGATGACCATTCCTGTAGATGGAGACTATTTTACCTTT  513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  377  TTCGATATTACGCAGGCTGGGCTGATAAAATTCATGGGATGACCATTCCTGTAGATGGAGACTATTTTACCTTT  450

Query  514  ACAAGACATGAACCCATTGGAGTGTGTGGACAGATCATCCCATGGAACTTCCCCCTGCTGATGTTTGCCTGGAA  587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  451  ACAAGACATGAACCCATTGGAGTGTGTGGACAGATCATCCCATGGAACTTCCCCCTGCTGATGTTTGCCTGGAA  524

Query  588  AATAGCTCCAGCTTTGTGCTGTGGCAATACAGTAGTTATTAAGCCAGCAGAGCAAACACCACTCAGTGCACTCT  661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  525  AATAGCTCCAGCTTTGTGCTGTGGCAATACAGTAGTTATTAAGCCAGCAGAGCAAACACCACTCAGTGCACTCT  598

Query  662  ACATGGGAGCCCTCATCAAG------------------------------------------------------  681
            ||||||||||||||||||||                                                      
Sbjct  599  ACATGGGAGCCCTCATCAAGGAGGCTGGCTTTCCTCCCGGGGTCATCAATATTTTGCCAGGATATGGGCCAACG  672

Query  682  ------------------------------------------------------------GAGGTTGGAAAGCT  695
                                                                        ||||||||||||||
Sbjct  673  GCTGGGGCAGCAATAGCTTCTCACATTGGCATAGACAAGATTGCATTCACAGGGTCTACTGAGGTTGGAAAGCT  746

Query  696  TATCCAAGAAGCAGCTGGAAGAAGTAATTTGAAGAGAGTAACTCTGGAACTTGGAGGCAAAAGTCCTAATATTA  769
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  747  TATCCAAGAAGCAGCTGGAAGAAGTAATTTGAAGAGAGTAACTCTGGAACTTGGAGGCAAAAGTCCTAATATTA  820

Query  770  TTTTTGCTGATGCTGACTTGGACTATGCTGTGGAGCAGGCCCACCAGGGTGTGTTCTTCAATCAAGGTCAGTGC  843
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  821  TTTTTGCTGATGCTGACTTGGACTATGCTGTGGAGCAGGCCCACCAGGGTGTGTTCTTCAATCAAGGTCAGTGC  894

Query  844  TGCACTGCAGGCTCTCGCATCTTCGTGGAGGAGTCCATCTATGAGGAGTTTGTGAGAAGAAGCGTGGAGCGGGC  917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  895  TGCACTGCAGGCTCTCGCATCTTCGTGGAGGAGTCCATCTATGAGGAGTTTGTGAGAAGAAGCGTGGAGCGGGC  968

Query  918  CAAGAGGCGCGTAGTGGGGAGTCCCTTTGACCCCACCACTGAGCAGGGTCCCCAGATTGATAAGAAACAGTACA  991
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  969  CAAGAGGCGCGTAGTGGGGAGTCCCTTTGACCCCACCACTGAGCAGGGTCCCCAGATTGATAAGAAACAGTACA  1042

Query  992  ACAAGATCTTGGAACTCATCCAGAGTGGTGTGGCTGAGGGCGCCAAGCTGGAATGTGGAGGCAAAGGACTGGGC  1065
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1043  ACAAGATCTTGGAACTCATCCAGAGTGGTGTGGCTGAGGGCGCCAAGCTGGAATGTGGAGGCAAAGGACTGGGC  1116

Query 1066  CGAAAGGGGTTTTTCATTGAGCCCACAGTGTTTTCCAACGTCACTGATGATATGCGGATTGCCAAGGAGGAGAT  1139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1117  CGAAAGGGGTTTTTCATTGAGCCCACAGTGTTTTCCAACGTCACTGATGATATGCGGATTGCCAAGGAGGAGAT  1190

Query 1140  CTTTGGCCCTGTTCAGGAAATTTTGAGATTTAAGACGATGGATGAAGTTATCGAAAGAGCCAATAACTCAGACT  1213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191  CTTTGGCCCTGTTCAGGAAATTTTGAGATTTAAGACGATGGATGAAGTTATCGAAAGAGCCAATAACTCAGACT  1264

Query 1214  TTGGACTCGTAGCAGCTGTCTTTACTAATGACATCAACAAGGCCCTCACAGTGTCTTCTGCAATGCAAGCTGGG  1287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1265  TTGGACTCGTAGCAGCTGTCTTTACTAATGACATCAACAAGGCCCTCACAGTGTCTTCTGCAATGCAAGCTGGG  1338

Query 1288  ACTGTTTGGATCAATTGTTACAATGCCTTAAATGCCCAGAGCCCCTTTGGGGGATTCAAGATGTCTGGAAATGG  1361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1339  ACTGTTTGGATCAATTGTTACAATGCCTTAAATGCCCAGAGCCCCTTTGGGGGATTCAAGATGTCTGGAAATGG  1412

Query 1362  GAGAGAAATGGGAGAATTTGGCTTGCGGGAGTACTCAGAAGTTAAGACGGTGACAGTAAAGATCCCCCAGAAGA  1435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1413  GAGAGAAATGGGAGAATTTGGCTTGCGGGAGTACTCAGAAGTTAAGACGGTGACAGTAAAGATCCCCCAGAAGA  1486

Query 1436  ACTCC  1440
            |||||
Sbjct 1487  ACTCC  1491

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