Construct: ORF ccsbBroad304_07315

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013451.1_s304c1, BRDN0000406761
Derived from:
ccsbBroadEn_07315
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ALDH1A2 (8854)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07315
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8854 ALDH1A2 aldehyde dehydrogenase 1 fa... NM_170696.3 99.9% 99.7% 16A>C
2 human 8854 ALDH1A2 aldehyde dehydrogenase 1 fa... NM_003888.4 92.5% 92.4% 16A>C;682_795del
3 human 8854 ALDH1A2 aldehyde dehydrogenase 1 fa... NM_001206897.1 87.3% 86.1% (many diffs)
4 human 8854 ALDH1A2 aldehyde dehydrogenase 1 fa... NM_170697.3 74.1% 74.1% 0_1ins288;394_507del
5 mouse 19378 Aldh1a2 aldehyde dehydrogenase fami... NM_009022.4 83.5% 89.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1506
ORF length:
1440
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgac ttccagcaag ctagagatgc ccggcgaggt gaaggccgac cccgccgccc
121tcatggcgtc gctgcacctc ctgccgtcgc ccacgcccaa tctcgaaatt aagtacacca
181agatctttat aaacaacgag tggcagaact cagagagtgg gagagtgttc cctgtctata
241atccagccac aggagaacag gtgtgtgaag ttcaagaagc agacaaggca gatatagaca
301aagcagtgca ggcagcccgc ctggctttct ctcttggttc agtgtggaga aggatggatg
361cttcagaaag gggacgtctg ttggataagc ttgcagactt ggtggaacgg gacagggcag
421ttcttgcaac catggaatcc ctaaatggtg gcaaaccatt cctgcaagct ttttatgtgg
481atttgcaggg cgtcatcaaa acctttcgat attacgcagg ctgggctgat aaaattcatg
541ggatgaccat tcctgtagat ggagactatt ttacctttac aagacatgaa cccattggag
601tgtgtggaca gatcatccca tggaacttcc ccctgctgat gtttgcctgg aaaatagctc
661cagctttgtg ctgtggcaat acagtagtta ttaagccagc agagcaaaca ccactcagtg
721cactctacat gggagccctc atcaaggagg ttggaaagct tatccaagaa gcagctggaa
781gaagtaattt gaagagagta actctggaac ttggaggcaa aagtcctaat attatttttg
841ctgatgctga cttggactat gctgtggagc aggcccacca gggtgtgttc ttcaatcaag
901gtcagtgctg cactgcaggc tctcgcatct tcgtggagga gtccatctat gaggagtttg
961tgagaagaag cgtggagcgg gccaagaggc gcgtagtggg gagtcccttt gaccccacca
1021ctgagcaggg tccccagatt gataagaaac agtacaacaa gatcttggaa ctcatccaga
1081gtggtgtggc tgagggcgcc aagctggaat gtggaggcaa aggactgggc cgaaaggggt
1141ttttcattga gcccacagtg ttttccaacg tcactgatga tatgcggatt gccaaggagg
1201agatctttgg ccctgttcag gaaattttga gatttaagac gatggatgaa gttatcgaaa
1261gagccaataa ctcagacttt ggactcgtag cagctgtctt tactaatgac atcaacaagg
1321ccctcacagt gtcttctgca atgcaagctg ggactgtttg gatcaattgt tacaatgcct
1381taaatgccca gagccccttt gggggattca agatgtctgg aaatgggaga gaaatgggag
1441aatttggctt gcgggagtac tcagaagtta agacggtgac agtaaagatc ccccagaaga
1501actcctaccc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
1561gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
1621acctctggat ta

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