Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07340
Subject:
NM_183078.3
Aligned Length:
1472
Identities:
1309
Gaps:
145

Alignment

Query    1  ATGGGGGAGCCCGGCTTCTTCGTCACAGGAGACCGCGCCGGTGGCCGGAGCTGGTGCCTGCGGCGGGTGGGGAT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGGGAGCCCGGCTTCTTCGTCACAGGAGACCGCGCCGGTGGCCGGAGCTGGTGCCTGCGGCGGGTGGGGAT  74

Query   75  GAGCGCCGGGTGGCTGCTGCTGGAAGATGGGTGCGAGGTGACTGTAGGACGAGGATTTGGTGTCACATACCAAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAGCGCCGGGTGGCTGCTGCTGGAAGATGGGTGCGAGGTGACTGTAGGACGAGGATTTGGTGTCACATACCAAC  148

Query  149  TGGTATCAAAAATCTGCCCCCTGATGATTTCTCGAAACCACTGTGTTTTGAAGCAGAATCCTGAGGGCCAATGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGTATCAAAAATCTGCCCCCTGATGATTTCTCGAAACCACTGTGTTTTGAAGCAGAATCCTGAGGGCCAATGG  222

Query  223  ACAATTATGGACAACAAGAGTCTAAATGGTGTTTGGCTGAACAGAGCGCGTCTGGAACCTTTAAGGGTCTATTC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACAATTATGGACAACAAGAGTCTAAATGGTGTTTGGCTGAACAGAGCGCGTCTGGAACCTTTAAGGGTCTATTC  296

Query  297  CATTCATCAGGGAGACTACATCCAACTTGGAGTGCCTCTGGAAAATAAGGAGAATGCGGAGTATGAATATGAAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CATTCATCAGGGAGACTACATCCAACTTGGAGTGCCTCTGGAAAATAAGGAGAATGCGGAGTATGAATATGAAG  370

Query  371  TTACTGAAGAAGACTGGGAGACAATATATCCTTGTCTTTCCCCAAAGAATGACCAAATGATAGAAAAAAATAAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTACTGAAGAAGACTGGGAGACAATATATCCTTGTCTTTCCCCAAAGAATGACCAAATGATAGAAAAAAATAAG  444

Query  445  GAATTGAGAACTAAAAGGAAATTCAGTTTGGATGAATTAGCAGGTCCTGGAGCTGAAGGCCCCTCAAATTTGAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAATTGAGAACTAAAAGGAAATTCAGTTTGGATGAATTAGCAGGTCCTGGAGCTGAAGGCCCCTCAAATTTGAA  518

Query  519  ATCCAAAATAAATAAAGTGTCTTGTGAATCTGGTCAGCCAGTGAAATCACAGGGGAAAGGTGAAGTGGCCAGTA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATCCAAAATAAATAAAGTGTCTTGTGAATCTGGTCAGCCAGTGAAATCACAGGGGAAAGGTGAAGTGGCCAGTA  592

Query  593  CACCCTCTGACAATTTGGATCCTAAGTTGACTGCCCTTGAGCCAAGTAAGACCACAGGGGCTCCCATTTACCCT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CACCCTCTGACAATTTGGATCCTAAGTTGACTGCCCTTGAGCCAAGTAAGACCACAGGGGCTCCCATTTACCCT  666

Query  667  GGCTTCCCCAAAGTCACAGAGGTTCATCATGAGCAGAAAGCCTCAAACTCTTCAGCATCTCAGAGAAGCTTACA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGCTTCCCCAAAGTCACAGAGGTTCATCATGAGCAGAAAGCCTCAAACTCTTCAGCATCTCAGAGAAGCTTACA  740

Query  741  GATGTTTAAGGTGACCATGTCCAGGATTCTGAGGCTCAAAATACAGATGCAGGAAAAACATGAAGCCGTTATGA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GATGTTTAAGGTGACCATGTCCAGGATTCTGAGGCTCAAAATACAGATGCAGGAAAAACATGAAGCCGTTATGA  814

Query  815  ATGTGAAAAAGCAGACCCAAAAGGGGAACTCAAAGAAAGTTGTGCAAATGGAGCAGGAACTTCAGGACTTACAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGTGAAAAAGCAGACCCAAAAGGGGAACTCAAAGAAAGTTGTGCAAATGGAGCAGGAACTTCAGGACTTACAG  888

Query  889  TCCCAGCTGTGTGCAGAGCAGGCTCAGCAGCAGGCAAGAGTGGAGCAACTAGAGAAGACTTTCCAGGAAGAGGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TCCCAGCTGTGTGCAGAGCAGGCTCAGCAGCAGGCAAGAGTGGAGCAACTAGAGAAGACTTTCCAGGAAGAGGA  962

Query  963  ACAGCATCTTCAGGGTTTGGAGATAGCCCAAGGAGAAAAGGACCTGAAGCAACAGCTGGCCCAGGCTCTGCAGG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ACAGCATCTTCAGGGTTTGGAGATAGCCCAAGGAGAAAAGGACCTGAAGCAACAGCTGGCCCAGGCTCTGCAGG  1036

Query 1037  AGCATTGGGCTCTAATGGAAGAGCTAAATCGCAGCAAGAAGGACTTTGAAGCAATCATTCAAGCCAAGAACAAA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGCATTGGGCTCTAATGGAAGAGCTAAATCGCAGCAAGAAGGACTTTGAAGCAATCATTCAAGCCAAGAACAAA  1110

Query 1111  GAATTAGAGCAGACCAAGGAAGAGAAGGAGAAGATGCAAGCACAGAAGGAAGAAGTTCTTAGCCACATGAATGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAATTAGAGCAGACCAAGGAAGAGAAGGAGAAGATGCAAGCACAGAAGGAAGAAGTTCTTAGCCACATGAATGA  1184

Query 1185  TGTGCTAGAGAATGAGCTCCAATGTATTATTTGTTCAGAATACTTCATTGAGGCTGTCACCTTGAACTGTGCCC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct 1185  TGTGCTAGAGAATGAGCTCCAATGTATTATTTGTTCAGAATACTTCATTGAG----------------------  1236

Query 1259  ACAGTTTCTGCTCCTACTGTATCAATGA-ATGGATGAAGCGGAAGATAGAATGCCC------CATTTGTCGGAA  1325
                                  |||.|| ||.|.|    |.|||||..|  |||.|      |||||    |||
Sbjct 1237  ----------------------CAAAGAGATTGTT----CTGAAGACCG--TGCTCTAAGGGCATTT----GAA  1278

Query 1326  GGACATTAAGT-CCAAAACATACTCTTTGGTTCTG-GACAATTGCATTAATAAGATGGTAAATAATCT-GAG--  1394
            .|||      | |||             |||..|| ||     ||    .|.||||||       ||| |||  
Sbjct 1279  AGAC------TGCCA-------------GGTAGTGCGA-----GC----CTGAGATGG-------TCTGGAGGA  1317

Query 1395  --CTC---AGAAGTGAAAGAACGACGAATTGTTCTCATTAGGGAACGAAAAGCAAAGAGATTGTTC  1455
              |||   ||..|||     ||..||  .||.||                                
Sbjct 1318  TTCTCTCTAGCCGTG-----ACTCCG--CTGCTC--------------------------------  1344

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