Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07353
- Subject:
- XR_001753298.1
- Aligned Length:
- 2968
- Identities:
- 1712
- Gaps:
- 1252
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACCTACCCAACCCATCCAGGAGCTGCTACACATTGAGGAAGGGGCAGAATGAATGCTGGGAAGCAACTACAAA 74
Query 1 -----------------------------------------------ATGGCG-GA-----TTTCGAAG----- 16
||||.| || ||||..||
Sbjct 75 GAACACTGCACAGTGGCTGTACCATTTTACATCCCTACCAGCAATGTATGGAGTGATCCAGTTTCTCAGCATCC 148
Query 17 -------------------------------ATTTGAG-------GAATATGGTTTCTAGTTTTAGGGTTTCTG 52
||||.|| |||||||||||||||||||||||||||||
Sbjct 149 TCGCCAGCATTTGGTGTTATCAGTGTTTTTCATTTTAGCCATTCTGAATATGGTTTCTAGTTTTAGGGTTTCTG 222
Query 53 AACTACAAGTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCATGACCTCCTGATGAGGGCGCTG 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AACTACAAGTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCATGACCTCCTGATGAGGGCGCTG 296
Query 127 CATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATTGTATAGACGCCGATATCCACG 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATTGTATAGACGCCGATATCCACG 370
Query 201 AACTCTTGAAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTTTGGATGGTGGCTCATCACCTG 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AACTCTTGAAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTTTGGATGGTGGCTCATCACCTG 444
Query 275 TAGAACCTGACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTTACACCTCACTCACCATCCTCT 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TAGAACCTGACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTTACACCTCACTCACCATCCTCT 518
Query 349 CCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCCAATTCCTCC 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCCAATTCCTCC 592
Query 423 TGTCCATCCTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATGTTCTCATCAAGCCCACGAGTT 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGTCCATCCTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATGTTCTCATCAAGCCCACGAGTT 666
Query 497 TAGTTCAAAGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTTGCTTTGACACCTCAACAAGTTAGAGAG 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TAGTTCAAAGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTTGCTTTGACACCTCAACAAGTTAGAGAG 740
Query 571 ATATGCATATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTTTGCCT 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATATGCATATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTTTGCCT 814
Query 645 GGCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCTATTTC 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCTATTTC 888
Query 719 CTTTGCCTGGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCTTGAATATTACA 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTTTGCCTGGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCTTGAATATTACA 962
Query 793 TCTTTAGTTAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAATTA 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCTTTAGTTAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAATTA 1036
Query 867 CTCTATGTCTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGAGATTAAAAATGAAAGGTATTA 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTCTATGTCTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGAGATTAAAAATGAAAGGTATTA 1110
Query 941 GAAACCCTGATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTACAACT 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAAACCCTGATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTACAACT 1184
Query 1015 AGCCTTCGGGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCCATGCCGTGCAGTGACTTGTAC 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCCTTCGGGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCCATGCCGTGCAGTGACTTGTAC 1258
Query 1089 ACATCTGCAGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGCCCACCTGGATTTGTCCTGTGT 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACATCTGCAGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGCCCACCTGGATTTGTCCTGTGT 1332
Query 1163 GTGACAAAAAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGAT 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTGACAAAAAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGAT 1406
Query 1237 GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAGAAGCTATGAAAGTATC 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAGAAGCTATGAAAGTATC 1480
Query 1311 CAGCCAACCGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGTGAGG 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAGCCAACCGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGTGAGG 1554
Query 1385 CAAGCAAGAAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGACGAAGAGGAAGACCCTCCTGCC 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CAAGCAAGAAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGACGAAGAGGAAGACCCTCCTGCC 1628
Query 1459 AAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTC 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTC 1702
Query 1533 TGTAAGGGTGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCATTAACAGACTACTCAGTACCAT 1606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGTAAGGGTGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCATTAACAGACTACTCAGTACCAT 1776
Query 1607 TCCACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGAGAACAAAGAAGAAATGATATTAATAATGAA 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCCACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGAGAACAAAGAAGAAATGATATTAATAATGAA 1850
Query 1681 CTGAAGCTTGGAACATCTTCTGATACTGTGCAACAG-------------------------------------- 1716
||||||||||||||||||||||||||||||||||||
Sbjct 1851 CTGAAGCTTGGAACATCTTCTGATACTGTGCAACAGTGAATACAAAATAAAACAAATAATTTGTATTTATGGAG 1924
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 1925 TGGAAAACAGCTTATTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTTTGGATTT 1998
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 1999 TCTTTCCCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTATGTTTTTGGATAGTCTCACCTCACCCTTAACAG 2072
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2073 CAAGCAGTACGTCTGTCACCACCACCAGCTCCCATGAAAGCAGTACTCATGTTAGTTCATCCAGCAGCAGGAGT 2146
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2147 GAGACAGGGGTCATAACCAGCAGTGGAAGTAACATTCCTGACATCATCTCATTGGACTAAAGGAGGACTCACTT 2220
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2221 GATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAGTCTGTGGAAACGTTCTTTTTTTTTTTTT 2294
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2295 TTTAATAATTTGGTATTTATTGAAAGTCAGATGGATTCTTTTGCTTTCTGAGGGGTGAACACAGAAGACTGCAA 2368
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2369 CAAGAACCAAATGACATGCAAGGATTTTTCTTAATTATGCTGTACTCTCAGCATCAGATACATTCAACCATAAC 2442
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2443 TGTATCTTCCTGAGAGATGGATTTCACTTTCATACGTTAATGGATGGAGTCTACAAATCAGTGAAAAAAGTTTT 2516
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2517 TGTTAAAATAAAGAGCAATAAAATTATGTAAATATTCAAGTAACCTTTTTTCTAATTAAAAAAAAAATTGTAAT 2590
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2591 CACTGATTCTAGAATGACAGCAACTTCTGTTTAACCTTACGTGAAGGAAAAAAAATATATGGAAAGAACTTAAT 2664
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2665 GTTTGCTGAATGAGTCCTTTCCATGGAGATTTGCTCTGTTTCATTGAAGTAATGAAGTTTCAGTACGTGGCCAA 2738
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2739 AGCTTGGATTCCACTTTTCGTCCTGCATTTCCACTTTTCTTCGTGATTGCATCAAAGAAAAATGGCATTCGTGT 2812
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2813 TACTTGGTTTTTTTCCTGCTTATCATTTACACTTTGACGTTGTTTGCTAATGAGTGCTGTGTGAAGTTCTGGGA 2886
Query 1717 -------------------------------------------------------------------------- 1716
Sbjct 2887 TTTGGCTACTCTTCATTGGTGATTATGTTTAAAAGCACTATGCAGATTCTGCCCTGACATAAAGTGTGTTATTA 2960
Query 1717 -------- 1716
Sbjct 2961 TGTTTTTA 2968
