Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07503
• Subject: XM_006514053.3
• Aligned Length: 2102
• Identities: 1438
• Gaps: 391

Alignment

Query    1  ATGGACGCTGACATGGACTACGAAAGACCCAACGTTGAAACTATCAAATGTGTGGTCGTGGGTGACAATGCCGT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGGGAAGACGCGCTTGATCTGTGCCAGGGCGTGCAACACCACACTCACGCAGTATCAGCTGCTGGCCACCCACG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCCAACAGTGTGGGCGATTGACCAGTACCGCGTGTGCCAGGAGGTCTTGGAGCGTTCTCGGGATGTTGTTGAT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAAGTGAGTGTTTCTCTCAGGCTTTGGGATACTTTTGGTGATCATCACAAAGACAGACGCTTTGCATATGGCAG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GTCTGATGTTGTGGTCCTCTGTTTTTCGATTGCTAATCCCAATTCCCTAAATCATGTGAAAAGCATGTGGTATC  370
                                                                            ||||||||||
Sbjct    1  ----------------------------------------------------------------ATGTGGTATC  10

Query  371  CAGAAATCAAGCACTTTTGCCCTCGAACACCCGTTATCCTTGTTGGGTGCCAGCTTGATCTCCGCTATGCCGAC  444
            .|||||||||||||||||||||||||||.|||||..||||.|||||.||||||||.||.||||||||.||||||
Sbjct   11  AAGAAATCAAGCACTTTTGCCCTCGAACGCCCGTCGTCCTGGTTGGCTGCCAGCTAGACCTCCGCTACGCCGAC  84

Query  445  CTGGAAGCTGTTAATCGAGCCAGGCGCCCGTTAGCAAGGCCCATAAAGAGAGGGGATATTTTGCCCCCAGAAAA  518
            |||||.||||||||.||.|||||.|||||.|||||||||||||||||||||||.||.|||||||||||||||||
Sbjct   85  CTGGAGGCTGTTAACCGGGCCAGACGCCCCTTAGCAAGGCCCATAAAGAGAGGTGACATTTTGCCCCCAGAAAA  158

Query  519  AGGCCGAGAGGTAGCAAAGGAACTTGGCTTACCATACTATGAAACAAGCGTGTTTGACCAGTTTGGTATCAAGG  592
            ||||||.|||||.||.||||||||||||.|.||.|||||.||.||.||||||||||||||||||||.|||||||
Sbjct  159  AGGCCGCGAGGTGGCGAAGGAACTTGGCATCCCGTACTACGAGACCAGCGTGTTTGACCAGTTTGGCATCAAGG  232

Query  593  ATGTGTTTGACAATGCAATCCGAGCAGCGCTGATTTCCCGCAGGCACCTGCAATTCTGGAAATCCCACCTAAAG  666
            |.|||||.||||||||.|||||||||||.||.||.||||||.||||||||||.|||||||||||||||.|.||.
Sbjct  233  ACGTGTTCGACAATGCCATCCGAGCAGCCCTCATCTCCCGCCGGCACCTGCAGTTCTGGAAATCCCACTTGAAA  306

Query  667  AAAGTCCAGAAACCTTTACTTCAGGCACCCTTCCTACCTCCAAAAGCCCCTCCACCGGTCATCAAAATTCCAGA  740
            |||||||||||.|||.|.||||||||.||||||||||||||.|||||.|||||.|||||||||||..|.||.||
Sbjct  307  AAAGTCCAGAAGCCTCTGCTTCAGGCGCCCTTCCTACCTCCGAAAGCTCCTCCCCCGGTCATCAAGGTCCCCGA  380

Query  741  GTGTCCTTCCATGGGGACAAATGAAGCTGCCTGTTTACTGGACAATCCTCTATGTGCCGATGTTCTGTTCATCC  814
            ||||||.||...||||||.|..||.||||||||||||||||||||.||.||.||.|||||.||.||.|||.|.|
Sbjct  381  GTGTCCGTCTGCGGGGACCAGCGATGCTGCCTGTTTACTGGACAACCCCCTGTGCGCCGACGTCCTCTTCGTTC  454

Query  815  TTCAGGACCAGGAACACATCTTTGCACATCGAATTTACCTCGCTACCTCTTCTTCCAAATTTTATGATCTGTTT  888
            |.||.|||.||||.|||||||||||.||.||.|||||||||||||||||||||||||||||.||.||.||.|||
Sbjct  455  TCCATGACGAGGAGCACATCTTTGCGCACCGCATTTACCTCGCTACCTCTTCTTCCAAATTCTACGACCTTTTT  528

Query  889  TTAATGGAATGTGAAGAATCCCCAAACGGGAGTGAAGGAGCCTGTGAGAAAGAGAAGCAGAGCAGAGATTTCCA  962
            ||||||||.||||||||||||||.....||.|||.||||||..|||||   |||..||.|.||||.|||||.||
Sbjct  529  TTAATGGAGTGTGAAGAATCCCCTTGTTGGGGTGGAGGAGCTGGTGAG---GAGGTGCCGTGCAGGGATTTTCA  599

Query  963  GGGGCGGATATTGAGTGTCG----ACCCAGAGGAAGAAAGGGAGGAGGGCCCGCCTAGGATTCCTCAGGCCGA-  1031
            ||||||||....||||.|.|    |.|| |||||||   ||.||||||||||.|..||||..||||||||.|| 
Sbjct  600  GGGGCGGACGCAGAGTCTTGGATCAGCC-GAGGAAG---GGAAGGAGGGCCCCCAGAGGACCCCTCAGGCTGAC  669

Query 1032  CCAGTGGA-AGTCTTCAAACAAGAGCCTGGTGGA------GGCTCTGGGGCTGGAAGCCGAGGGTGCAGTTCCT  1098
            |||  ||| .|||||||..|.||..||||...||      ||||.||..|.||||||||..||     ||||| 
Sbjct  670  CCA--GGAGCGTCTTCAGGCCAGGACCTGCCTGAGAGTTTGGCTTTGCAGATGGAAGCCTCGG-----GTTCC-  735

Query 1099  GAGACACAGACTTTGACCGGATGGAGTAAGGGGTTCATTGGCATGCACAGGGAAATGCAAGTCAACCCCATTTC  1172
            |||..|||..|..||.||||.|||||.||||||||..|..|||||||||||||..|||..||||||||||||||
Sbjct  736  GAGGGACACGCCCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGTCAACCCCATTTC  809

Query 1173  AAAGCGGATGGGGCCCA-TGACTGTGGTCAGGATGGACGCTTCAGTCCAGCCAGGCCCTTTTCGGACCCTGCTC  1245
            .||||||.| ||||||| ||||.|||||||||.|||||.|.||..|.|||.||||||||||.||||||||||| 
Sbjct  810  CAAGCGGGT-GGGCCCAGTGACCGTGGTCAGGCTGGACCCATCGATGCAGTCAGGCCCTTTCCGGACCCTGCT-  881

Query 1246  CAG-TTTCTTTATACGGGACAACTGGATGAAAAGGAAAAGGATTTGGTGGGCCTGGCTCAGATCGCAGAGGTCC  1318
            .|| ||.||.||..|.||.||.|||||.|||||||||||.|||.||.||||.|||||||||||.||.|||||||
Sbjct  882  GAGATTCCTCTACTCTGGGCAGCTGGACGAAAAGGAAAAAGATCTGCTGGGGCTGGCTCAGATGGCCGAGGTCC  955

Query 1319  TCGAGATGTTCGATTTGAGGATGATGGTGGAAAACATCATGAACAAGGAAGCCTTCATGAACCAGGAGATTACG  1392
            |.||||||||.|||.|||||||||||||.||.||.||||||||||||||.||.||.||||||||||||||.|||
Sbjct  956  TGGAGATGTTTGATCTGAGGATGATGGTAGAGAATATCATGAACAAGGAGGCTTTTATGAACCAGGAGATCACG  1029

Query 1393  AAAGCCTTTCACGTAAGGAAAGCCAATCGGATAAAAGAGTGTCTCAGCAAGGGAACGTTCTCGGACGTGACATT  1466
            ||||||||.|||||..||||||||||||||||.|||||.||||||||||||||.||.|||||.|||||||||||
Sbjct 1030  AAAGCCTTCCACGTCCGGAAAGCCAATCGGATCAAAGAATGTCTCAGCAAGGGCACCTTCTCAGACGTGACATT  1103

Query 1467  TAAATTGGACGATGGAGCCATCAGTGCCCACAAGCCGCTGCTGATCTGTAGCTGTGAGTGGATGGCAGCCATGT  1540
            ||..|||||.||.|||||||||||.|||||||||||||||||||||||||||||.||.||||||||.|||||||
Sbjct 1104  TACCTTGGATGACGGAGCCATCAGCGCCCACAAGCCGCTGCTGATCTGTAGCTGCGAATGGATGGCGGCCATGT  1177

Query 1541  TCGGGGGGTCATTTGTGGAAAGTGCCAACAGTGAGGTGTATCTCCCGAACATAAACAAGATATCAATGCAAGCA  1614
            |||||||.||.|||||||||||.||||||.|||||||..|.|||||.||.|||||||||||.||.|||||.||.
Sbjct 1178  TCGGGGGTTCCTTTGTGGAAAGCGCCAACCGTGAGGTTCACCTCCCAAATATAAACAAGATGTCGATGCAGGCG  1251

Query 1615  GTATTGGATTATCTCTATACCAAGCAGTTGTCTCCTAACTTGGATCTGGACCCGCTGGAATTAATTGCCTTGGC  1688
            ||.|||||.||.|||||.||||||||||||||.||.||||||||.||||||||.|||||.||||||||||||||
Sbjct 1252  GTGTTGGAATACCTCTACACCAAGCAGTTGTCACCCAACTTGGACCTGGACCCCCTGGAGTTAATTGCCTTGGC  1325

Query 1689  AAACAGATTTTGCCTGCCACACTTGGTTGCACTTGCAGAACAGCATGCCGTTCAGGAGTTGACCAAAGCCGCCA  1762
            ||||||||||||||||.|||||||||||||.||.|.|||.||||||||.||.||||||.|.|||||.|||||..
Sbjct 1326  AAACAGATTTTGCCTGACACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGCCGCTG  1399

Query 1763  CGAGTGGCGTGGGCATTGACGGAGAAGTGCTCTCTTACTTGGAATTGGCTCAGTTTCACAATGCCCACCAGTTG  1836
            ..|||||.|||.||||.||.||.|||||.|||||.||||||||..||||.|||||||||||||||.|.|||.|.
Sbjct 1400  TCAGTGGTGTGAGCATCGATGGTGAAGTTCTCTCCTACTTGGAGCTGGCACAGTTTCACAATGCCAATCAGCTA  1473

Query 1837  GCCGCCTGGTGTTTGCACCACATCTGCACCAACTACAACAGTGTATGCTCCAAGTTCCGTAAGGAAATCAAATC  1910
            ||.||||||||||||||.|||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||
Sbjct 1474  GCTGCCTGGTGTTTGCATCACATCTGCACCAACTACAACAGCGTCTGTTCCAAGTTCCGCAAGGAAATCAAATC  1547

Query 1911  AAAATCTGCAGACAACCAGGAATACTTCGAGCGGCACCGCTGGCCCCCTGTGTGGTACCTGAAGGAAGAAGATC  1984
            .||.||.||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||.|||||.|
Sbjct 1548  CAAGTCAGCAGACAACCAGGAGTACTTTGAGCGGCACCGCTGGCCCCCTGTGTGGTACCTGAAGGAGGAAGACC  1621

Query 1985  ACTACCAGCGTGTGAAAAGGGAACGAGAGAAGGAAGATATTGCACTAAATAAGCATCGCTCAAGACGAAAGTGG  2058
            ||||||||||||||||.||||||||||||||.||.||..|.||.||.||.|||||.|..|||||..||||||||
Sbjct 1622  ACTACCAGCGTGTGAAGAGGGAACGAGAGAAAGAGGACCTGGCGCTGAACAAGCACCATTCAAGGAGAAAGTGG  1695

Query 2059  TGCTTCTGGAATTCATCTCCAGCAGTGGCC  2088
            ||.||||||.||||.||.|||||.||.|||
Sbjct 1696  TGTTTCTGGCATTCGTCCCCAGCTGTCGCC  1725