Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07510
- Subject:
- XR_243026.4
- Aligned Length:
- 3831
- Identities:
- 2331
- Gaps:
- 1499
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GATGCTGTTTGGCGACTCGTCGCCATTCCCGGAGCAGGTCGGCCTCGGCCCAGGGGCGAGTATCCGTTGCTGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGAGACACTAGTCCCCGACACCGAGACAGCCAGCCCTCTCCCCTGCCTCGCGGCGGGAGAGCGTGTCCGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCGGCCGGCGGGGCTCGCGCAACCTCCCTCGCCTCCCCTTCCCCCGCAGCCTCCGCCCCGCCAGGCCCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGACTCCCGAGCCCCGGCCTCCTCGTCCTCGGTCGCCGCTGCCGCCGGGCTTAACAGCCCCGTCCGCCGCTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTTCCTAGTTTGAGAAGCCAAGGAAGGAAACAGGGAAAAATGTCGCCATGAAGGCCGAGAACCGCTGCCGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGACCCCCGCCGGCCCTGAACGCCATGAGCCTGGGTCCCCGCCGCGCCCGCTCCGCTCCGACTGCCGTCGCCG 444
Query 1 ---------------ATGCCGCTGAGCTCCCCCAACGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGG 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCGAGGCCCCCGTTGATGCCGCTGAGCTCCCCCAACGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGG 518
Query 60 CTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGGCGGGGCCAG 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGGCGGGGCCAG 592
Query 134 CCGGCGAGTCTAAACCCAAGAGCGATGGAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTT 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCGGCGAGTCTAAACCCAAGAGCGATGGAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTT 666
Query 208 TCCTACCCCAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAGTTCACAGAAAAGCAAGACTTTTAACAA 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCCTACCCCAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAGTTCACAGAAAAGCAAGACTTTTAACAA 740
Query 282 GATGCCTCCTCAAAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGATGAGG 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATGCCTCCTCAAAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGATGAGG 814
Query 356 TAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAAGAAGATCAACCTGAACCACTTG 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAAGAAGATCAACCTGAACCACTTG 888
Query 430 TTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGGCAGTGGACATGGTAGCTGGGGAAAGAG 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGGCAGTGGACATGGTAGCTGGGGAAAGAG 962
Query 504 GAACAAGTGGGGACATAAGCCTTTTAACAAGGAACTCTTTTTACAGGCCAACTGCCAATTTGTGGTGTCTGAAG 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAACAAGTGGGGACATAAGCCTTTTAACAAGGAACTCTTTTTACAGGCCAACTGCCAATTTGTGGTGTCTGAAG 1036
Query 578 ACCAAGACTACACAGCTCATTTTGCTGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATT 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCAAGACTACACAGCTCATTTTGCTGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATT 1110
Query 652 TGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACA 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACA 1184
Query 726 CATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTT 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTT 1258
Query 800 ACAGTTCTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCACAGAGTCACATCAGTATGTTGTTGGTGATACC 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACAGTTCTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCACAGAGTCACATCAGTATGTTGTTGGTGATACC 1332
Query 874 ATTACGATGCAGCTGATGAAGAGGGAGAAAGGGGTGTTGGTGGCTTTGCCCAAATCCAAATGGATGAATGTAGA 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATTACGATGCAGCTGATGAAGAGGGAGAAAGGGGTGTTGGTGGCTTTGCCCAAATCCAAATGGATGAATGTAGA 1406
Query 948 CCATCCCATTCATCTAGGAGATGAACAGCACAGCCAGTACTCCAAGTTTCTGCTGGCCTCTAAGGAGCAGGTGC 1021
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1407 CCATCCCATTCATCTAGGAGATGAACAGCACAGCCAGTACTCCAAGTTGCTGCTGGCCTCTAAGGAGCAGGTGC 1480
Query 1022 TGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCAGCAGCTGGCAGAGGAGAAGCACACTCCCGAGTCC 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCAGCAGCTGGCAGAGGAGAAGCACACTCCCGAGTCC 1554
Query 1096 TGCTTTATTGAGGCAGCTATCCAGGAGCTCAAGACTCGGGAAGAGGCTCTGTCGGGATTGGCCGGAAGCAGAAG 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGCTTTATTGAGGCAGCTATCCAGGAGCTCAAGACTCGGGAAGAGGCTCTGTCGGGATTGGCCGGAAGCAGAAG 1628
Query 1170 GGAGGTCACTGGTGTTGTGGCTGCTCTGGAACAACTGGTGCTGATGGCTCCCTTGGCGAAGGAGTCTGTTTTTC 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGAGGTCACTGGTGTTGTGGCTGCTCTGGAACAACTGGTGCTGATGGCTCCCTTGGCGAAGGAGTCTGTTTTTC 1702
Query 1244 AACCCAGGA---------------AGGGTGTGCTGGAGTATCTGTCTGCCTTCGATGAAGAAACCACGGAAGTT 1302
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AACCCAGGAAGAGTTTGCTGCAACAGGGTGTGCTGGAGTATCTGTCTGCCTTCGATGAAGAAACCACGGAAGTT 1776
Query 1303 TGTTCTCTGGACACTCCTTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAGGAAGCAGTGTCTGAACCAGA 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TGTTCTCTGGACACTCCTTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAGGAAGCAGTGTCTGAACCAGA 1850
Query 1377 GCCTGAGGGGTTGCCAGAGGCCTGTGATGACTTGGAGTTAGCAGATGACAATCTTAAAGAGGGGACCATTTGCA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCCTGAGGGGTTGCCAGAGGCCTGTGATGACTTGGAGTTAGCAGATGACAATCTTAAAGAGGGGACCATTTGCA 1924
Query 1451 CTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCCTTGTTACTACTTT 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCCTTGTTACTACTTT 1998
Query 1525 TACCAAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCGGGAGTACGGCAG 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TACCAAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCGGGAGTACGGCAG 2072
Query 1599 CCTGGAGAGGAGCCCCGAGAAGATCTCAGCAACTGTGGTGGAGATTGCTGGCTACTCCATGTCTGAGGATGTTC 1672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CCTGGAGAGGAGCCCCGAGAAGATCTCAGCAACTGTGGTGGAGATTGCTGGCTACTCCATGTCTGAGGATGTTC 2146
Query 1673 GACAGCGTCACAGATATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTGGCTTTGCAACCT 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GACAGCGTCACAGATATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTGGCTTTGCAACCT 2220
Query 1747 CCTGTGGTCTCTAAGGAAACCCTAGAGATGTTCTCAGATGACATTGAGAAGAGGAAACGTCAGCGCCAAAAGAA 1820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CCTGTGGTCTCTAAGGAAACCCTAGAGATGTTCTCAGATGACATTGAGAAGAGGAAACGTCAGCGCCAAAAGAA 2294
Query 1821 GGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATTGAGATAGAGGAGAACAAGAAACAGGGCAAGTACCCAGAAG 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATTGAGATAGAGGAGAACAAGAAACAGGGCAAGTACCCAGAAG 2368
Query 1895 TCCACATTCCCCTCGAGAATCTACAGCAGTTTCCTGCCTTCAATTCTTATACCTGCTCCTCTGATTCTGCTTTG 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TCCACATTCCCCTCGAGAATCTACAGCAGTTTCCTGCCTTCAATTCTTATACCTGCTCCTCTGATTCTGCTTTG 2442
Query 1969 GGTCCCACCAGCACCGAGGGCCATGGGGCCCTCTCCATTTCTCCTCTCAGCAGAAGTCCAGGTTCCCATGCAGA 2042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GGTCCCACCAGCACCGAGGGCCATGGGGCCCTCTCCATTTCTCCTCTCAGCAGAAGTCCAGGTTCCCATG---- 2512
Query 2043 CTTTCTGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCCTCATTCTGCGTTGGGAGTCTGGAAGAAG 2116
Sbjct 2513 -------------------------------------------------------------------------- 2512
Query 2117 ACTCTCCCTTCCCTTCCTTTGCCCAGATGCTGAGGGTTGGAAAAGCAAAAGCAGATGTGTGGCCCAAAACTGCT 2190
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2513 -----------------------CAGATGCTGAGGGTTGGAAAAGCAAAAGCAGATGTGTGGCCCAAAACTGCT 2563
Query 2191 CCAAAGAAAGATGAGAACAGCTTAGTTCCTCCTGCCCCTGTGGACAGCGACGGGGAGAGTGATAATTCAGACCG 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2564 CCAAAGAAAGATGAGAACAGCTTAGTTCCTCCTGCCCCTGTGGACAGCGACGGGGAGAGTGATAATTCAGACCG 2637
Query 2265 TGTTCCTGTGCCCAGTTTTCAAAATTCCTTCAGCCAAGCTATTGAAGCAGCCTTCATGAAACTGGACACACCAG 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2638 TGTTCCTGTGCCCAGTTTTCAAAATTCCTTCAGCCAAGCTATTGAAGCAGCCTTCATGAAACTGGACACACCAG 2711
Query 2339 CTACTTCAGATCCCCTCTCTGAAGAGAAAGGAGGAAAGAAAAGAAAAAAACAGAAACAGAAGCTCCTGTTCAGC 2412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2712 CTACTTCAGATCCCCTCTCTGAAGAGAAAGGAGGAAAGAAAAGAAAAAAACAGAAACAGAAGCTCCTGTTCAGC 2785
Query 2413 ACCTCAGTCGTCCACACCAAG----------------------------------------------------- 2433
|||||||||||||||||||||
Sbjct 2786 ACCTCAGTCGTCCACACCAAGTGACACTACTGGCCCAGGCTACCTTCTCCATCTGGTTTTTGTTTTTGTTTTTT 2859
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 2860 TTTCCCCCATGCTTTTGTTTGGCTGCTGTAATTTTTAAGTATTTGAGTTTGAACAGATTAGCTCTGGGGGGAGG 2933
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 2934 GGGTTTCCACAATGTGAGGGGGAACCAAGAAAATTTTAAATACAGTGTATTTTCCAGCTTCCTGTCTTTACACC 3007
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3008 AAAATAAAGTATTGACACAAGAGATCTCTTCCTGCCAAGGTTTTTAGTTCATTGCCAGTTTAGTCTTTTTGACC 3081
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3082 CATGTGTAATTAATTTTTCTCAACCCAAAGTAAGATTGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCA 3155
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3156 GAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAGTACACCTCTCAGTTTGTCTTT 3229
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3230 TAAAAAACAGCTGAATCTTTACTACCTATTTAGTTCTCCTTGTTAAAGAAACAGGGGTGGGAATAAAATGGATT 3303
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3304 TAGGACACCCAGTTTGAATTGCAGTTTTTTTTTTTCTGACACATGGCCAGGCTGTGGTGCCAGCTTAATGGAGT 3377
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3378 AGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGAGCATGGCTTGAGTTGGTAAGGA 3451
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3452 AAGCTGTAACTCACGAAGCCCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTCA 3525
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3526 TAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCCATCTGAAGCGGTAGCATTGCCACCATCTCCCTCT 3599
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3600 CATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATGTGAATTCTTTTGCTGCTTAATAAAGTGA 3673
Query 2434 --------------------------------------------------------- 2433
Sbjct 3674 CCTCTAGGTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAATCACCTGCACAAGC 3730
