Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07529
• Subject: XM_011544014.2
• Aligned Length: 1443
• Identities: 665
• Gaps: 744

Alignment

Query    1  ATGAGCGATGTTACCATTGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATATATAAAAAACTGGAGGCCAAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATACTTCCTTTTGAAGACAGATGGCTCATTCATAGGATATAAAGAGAAACCTCAAGATGTGGATTTACCTTATC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCCTCAACAACTTTTCAGTGGCAAAATGCCAGTTAATGAAAACAGAACGACCAAAGCCAAACACATTTATAATC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGATGTCTCCAGTGGACTACTGTTATAGAGAGAACATTTCATGTAGATACTCCAGAGGAAAGGGAAGAATGGAC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGAAGCTATCCAGGCTGTAGCAGACAGACTGCAGAGGCAAGAAGAGGAGAGAATGAATTGTAGTCCAACTTCAC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AAATTGATAATATAGGAGAGGAAGAGATGGATGCCTCTACAACCCATCATAAAAGAAAGACAATGA-ATGATTT  443
                                                                          |||| .|.||||
Sbjct    1  --------------------------------------------------------------ATGAGTTCATTT  12

Query  444  TGACTATTTGAAACTACTAGGTAAAGGCACTTTTGGGAAAGTTATTTTGGTTCGAGAGAAGGCAAGTGGAAAAT  517
            ...|.|||                     |||.||||         |||||                       
Sbjct   13  ATTCAATT---------------------CTTATGGG---------TTGGT-----------------------  33

Query  518  ACTATGCTATGAAGATTCTGAAGAAAGAAGTCATTATTGCAAAGGATGAAGTGGCACACACTCTAACTG-AAAG  590
                          |||             ||.|||||.|||||                    ||||| ||| 
Sbjct   34  --------------ATT-------------TCTTTATTACAAAG--------------------AACTGCAAA-  59

Query  591  CAGAGTATTAAAGAACACTAGACATC-CCTTTTTAACATCCTTGAAATATTCCTTCCAGACAAAAGACCGTTTG  663
             ||||               ||.||| ||||       .||||                ||||||.|...|||.
Sbjct   60  -AGAG---------------GATATCGCCTT-------ACCTT----------------ACAAAATAAGATTTA  94

Query  664  TGTTTTGTGATGGAATATGTTAATGGGGGCGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTCTCTGAGGA  737
            .|||   |||                            |||.||                          ||.|
Sbjct   95  GGTT---TGA----------------------------TTTACA--------------------------AGCA  111

Query  738  CCGCACACGTTTCTATGGTGCAGAAATTGTCTCTGCCTTGGACTATCTACATTCCGGAAAGATTGTGTACCGTG  811
            ||.|                ||.|||                      |||||                     
Sbjct  112  CCAC----------------CAAAAA----------------------ACATT---------------------  126

Query  812  ATCTCAAGTTGGAGAATCTAATGCGGGACAAAGATGGCCACATAAAAATTACAGATTTTGGACTTTGCAAAGAA  885
             |||    ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  127  -TCT----TTGGAGAATCTAATGCTGGACAAAGATGGCCACATAAAAATTACAGATTTTGGACTTTGCAAAGAA  195

Query  886  GGGATCACAGATGCAGCCACCATGAAGACATTCTGTGGCACTCCAGAATATCTGGCACCAGAGGTGTTAGAAGA  959
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  196  GGGATCACAGATGCAGCCACCATGAAGACATTCTGTGGCACTCCAGAATATCTGGCACCAGAGGTGTTAGAAGA  269

Query  960  TAATGACTATGGCCGAGCAGTAGACTGGTGGGGCCTAGGGGTTGTCATGTATGAAATGATGTGTGGGAGGTTAC  1033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  270  TAATGACTATGGCCGAGCAGTAGACTGGTGGGGCCTAGGGGTTGTCATGTATGAAATGATGTGTGGGAGGTTAC  343

Query 1034  CTTTCTACAACCAGGACCATGAGAAACTTTTTGAATTAATATTAATGGAAGACATTAAATTTCCTCGAACACTC  1107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  344  CTTTCTACAACCAGGACCATGAGAAACTTTTTGAATTAATATTAATGGAAGACATTAAATTTCCTCGAACACTC  417

Query 1108  TCTTCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGACCAGA  1181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  418  TCTTCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGACCAGA  491

Query 1182  TGATGCAAAAGAAATTATGAGACACAGTTTCTTCTCTGGAGTAAACTGGCAAGATGTATATGATAAAAAGCTTG  1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  492  TGATGCAAAAGAAATTATGAGACACAGTTTCTTCTCTGGAGTAAACTGGCAAGATGTATATGATAAAAAGCTTG  565

Query 1256  TACCTCCTTTTAAACCTCAAGTAACATCTGAGACAGATACTAGATATTTTGATGAAGAATTTACAGCTCAGACT  1329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  566  TACCTCCTTTTAAACCTCAAGTAACATCTGAGACAGATACTAGATATTTTGATGAAGAATTTACAGCTCAGACT  639

Query 1330  ATTACAATAACACCACCTGAAAAATGTCA-----------------------GCAATCAG--------------  1366
            |||||||||||||||||||||||||.|.|                       .||||.||              
Sbjct  640  ATTACAATAACACCACCTGAAAAATATGATGAGGATGGTATGGACTGCATGGACAATGAGAGGCGGCCGCATTT  713

Query 1367  ------ATTGTGGCATGCTGGGTAACTGGA--AAAAA  1395
                  |||.|  |.|.||..|.||.||||  |.|| 
Sbjct  714  CCCTCAATTTT--CCTACTCTGCAAGTGGACGAGAA-  747