Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07648
- Subject:
- NM_022554.3
- Aligned Length:
- 1836
- Identities:
- 598
- Gaps:
- 1167
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
|||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct 149 TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGGGAGA 296
|||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||
Sbjct 223 GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTT----------------- 279
Query 297 ACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGG 370
||| |||||
Sbjct 280 ------------------------------------TCC------GTCCA------------------------ 287
Query 371 CCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Sbjct 288 -------------------------------------------------------------------------- 287
Query 445 GCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCT 518
Sbjct 288 -------------------------------------------------------------------------- 287
Query 519 GTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTA 592
Sbjct 288 -------------------------------------------------------------------------- 287
Query 593 AAACTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG 666
|.|||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct 288 ----------------------GAAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG 339
Query 667 GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATG------------------------------- 709
||||||||||||||||||||||||||||.|||.||||||||||
Sbjct 340 GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGCACTGTGAAAATTCCACCTAA 413
Query 710 --GCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCA 781
|||||||||||||||||||||||||||||.|.||.|||||||||||..||||||||||||||||||||||||
Sbjct 414 ACGCCCACCAAGAAAACACATTGTGGAGCGCAACACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCA 487
Query 782 AGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATC 855
||||..|.|||||||||||.|||||.||||||||.||..||||||||||.|||||||||||.||||||||.|||
Sbjct 488 AGAAACGGCTGATTGAGGACACTGAGGACTGGCGCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATC 561
Query 856 CTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCGATAATACAAAGAAGGCAAATAACTCTCA 929
|||||||||||||||||||||||.|||.|||.||||||||||...||.|||||.|||||||||||
Sbjct 562 CTTGCCCAGATCACTGGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAA--------- 626
Query 930 GGAGCCTTCTCCGCAGTTGGCTTCCTCGGTAGCTTCCACACGGAGCATGCCCGAGAGCCTGGACAGCCCAACCT 1003
|||.|
Sbjct 627 ------------------------------------------------------------GGAAA--------- 631
Query 1004 CTGGCAGACCAGGGGTTACCAGCCTCACAACTGCAGCTGCCTTCAAGCCTGTAGGATCCACTGGCGTCATCAAG 1077
||| |||| ||||||.|.||.||| ||| |||.
Sbjct 632 -----AGA--------TACC-------------------CCTTCACGTCTTTAG--TCC-----------CAAA 660
Query 1078 T-CACCAA--------GCTGGCAACGGCCAAACCAAGGAGTACCTTC--CAC-TGGAAGAATCTCAA---ACAG 1136
| |||.|| .||||| ||||.|.||| ||| ||| || .|||.|| ||||
Sbjct 661 TACACAAAATTACGTGACTGGC---------ACCATGAAGT---TTCAGCACGTG-----CTCTTAATGTACAG 717
Query 1137 CGCTGCTTACTCAGGATCAGTGGCACCAGCCAACTCAGCTTTGGGACAAACCCAGCCAAGTGACCAGGACACTT 1210
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1211 TAGTGCAAAGAGCTGAGCACATTCCAGCAGGGAAACGAACTCCGATGTGCGCCCATTGTAACCAGGTCATCAGA 1284
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1285 GGACCATTCTTAGTGGCACTGGGGAAATCTTGGCACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAAT 1358
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1359 GGCCTACATTGGATTTGTAGAGGAGAAAGGAGCCCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTG 1432
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1433 AATGTGGTCGATGCCAAAGGAAGATCCTTGGAGAAGTCATCAATGCGTTGAAACAAACTTGGCATGTTTCCTGT 1506
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1507 TTTGTGTGTGTAGCCTGTGGAAAGCCCATTCGGAACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGA 1580
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1581 GACTGATTATTATGCCCTCTTTGGTACTATATGCCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCC 1654
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1655 TGGAAGCTCTGGGCTACACCTGGCATGACACTTGCTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAG 1728
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1729 ACCTTTTTCTCCAAGAAGGACAAGCCCCTGTGTAAGAAACATGCTCATTCTGTGAATTTT 1788
Sbjct 718 ------------------------------------------------------------ 717
