Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07648
- Subject:
- XM_006501744.1
- Aligned Length:
- 2219
- Identities:
- 1267
- Gaps:
- 775
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
|||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct 149 TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGGGAGA 296
|||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||
Sbjct 223 GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTT----------------- 279
Query 297 ACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGG 370
||| |||||
Sbjct 280 ------------------------------------TCC------GTCCA------------------------ 287
Query 371 CCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Sbjct 288 -------------------------------------------------------------------------- 287
Query 445 GCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCT 518
Sbjct 288 -------------------------------------------------------------------------- 287
Query 519 GTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTA 592
Sbjct 288 -------------------------------------------------------------------------- 287
Query 593 AAACTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG 666
|.|||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct 288 ----------------------GAAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG 339
Query 667 GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATG------------------------------- 709
||||||||||||||||||||||||||||.|||.||||||||||
Sbjct 340 GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGCACTGTGAAAATTCCACCTAA 413
Query 710 --GCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCA 781
|||||||||||||||||||||||||||||.|.||.|||||||||||..||||||||||||||||||||||||
Sbjct 414 ACGCCCACCAAGAAAACACATTGTGGAGCGCAACACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCA 487
Query 782 AGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATC 855
||||..|.|||||||||||.|||||.||||||||.||..||||||||||.|||||||||||.||||||||.|||
Sbjct 488 AGAAACGGCTGATTGAGGACACTGAGGACTGGCGCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATC 561
Query 856 CTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCGATAATACAAAGAAGGCAAA---TAAC-- 924
|||||||||||||||||||||||.|||.|||.||||||||||...||.|||||.||||||||||| |.||
Sbjct 562 CTTGCCCAGATCACTGGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAAGTTTTACAG 635
Query 925 -TCTCAGGA-----GCCTT-------------------------CTCCGCAG---------------------- 945
||||.||| .|||| ||||.|||
Sbjct 636 TTCTCTGGAAGACCCCCTTAAGAACGGACCACACCCACCTGCAGCTCCCCAGCTGTTAAAAGTTCATAGTCAAG 709
Query 946 -----------------------------------------------------------------------TTG 948
|||
Sbjct 710 TAGCCATAGTTTCTAAGGAAGCAGCCACTTACTCTAGTGTAAGCAGGTCTACAAGAACTGTAGAAGGTGCTTTG 783
Query 949 G----------------------CTTC----------CTCGGTA-------------------------GCTTC 965
| |||| ||.|.|| |||.|
Sbjct 784 GAAGGCTTTGGAAACTTTCCTGCCTTCTCCCCTCCTACTAGATACAGTGCTGTAGTCGTCAGTGATGCGGCTGC 857
Query 966 CAC-------------------------AC--GGAGCAT--GCCC-GAGAGC------------CTGGA----- 992
||| || ||..|.| |||| ||.|.| |||||
Sbjct 858 CACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGGCTCTTCGGCCCTGAAAACTCCCAGTCTCTTCTGGATGCAC 931
Query 993 -------CAG-------CCCAA--------------------------CCTCTG-------------------- 1006
||| ||||| ||||||
Sbjct 932 TGTGCATCAGCACTGTCCCCAAGCCTCTAGCTCTTTCCTGTCTTCAGTCCTCTGAGGAGTCGAGTGGCTCTGTC 1005
Query 1007 -------------GCAG-----ACCAGGGG--TT-------ACCAGCCTCA----------CAACT-------- 1035
|||| .|||||.| || |||.||.||| ||.||
Sbjct 1006 CACGTTAAGAAGAGCAGTAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAGCTTCACCTCTGAGCGC 1079
Query 1036 ----------------------------------------------------------GCAGCTGCCTTCAAGC 1051
||.|||||.|||||||
Sbjct 1080 GTCTGAGGGCCCCGAGAGCCCAGGTTCCAGCAGGCCCTCGGTGGCTGGCCTCCGCTCCGCTGCTGCTTTCAAGC 1153
Query 1052 CTGTAGGATCCACTGGCGTCATCAAGTCACCAAGCTGGCAACGGCCAAACCAAGGAGTACCTTCCACTGGAAGA 1125
|||||||||||||..||| ||||||||||.||||||||.||.||||||||||.||.||||||.|||||.|||
Sbjct 1154 CTGTAGGATCCACCAGCG---TCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGA 1224
Query 1126 ATCTCAAACAGCGCTGCTTACTCAGGATCAGTGGCACCAGCCAACTCAG-CTTTGGGACAAACCCAGCCAAGTG 1198
||.|||||||..||...||..|||||..|||.||| | ||.||||.|...||||||||||||
Sbjct 1225 ATTTCAAACAATGCACGTTCTTCAGGTACAGGGGC-------------GTCTGTGGGGCCTCCCCAGCCAAGTG 1285
Query 1199 ACCAGGACACTTTAGTGCAAAGAGCTGAGCACATTCCAGCAGGGAAACGAACTCCGATGTGCGCCCATTGTAAC 1272
||||.|||||..|.|||||.|||||.||.|||||||||||.||.||.||.||.||.|||||.|||||.||.|||
Sbjct 1286 ACCAAGACACACTTGTGCAGAGAGCGGAACACATTCCAGCGGGCAAGCGGACCCCCATGTGTGCCCACTGCAAC 1359
Query 1273 CAGGTCATCAGAGGACC-ATTCTTAGTGGCACTGGGGAAATCTTGGCACCCAGAAGAATTCAACTGCGCTCACT 1345
||.||.|||||.||||| .||||| |||||.||||||||.||.|||||.|||||||||||.|||||.|||||.|
Sbjct 1360 CAAGTTATCAGGGGACCTTTTCTT-GTGGCTCTGGGGAAGTCCTGGCATCCAGAAGAATTTAACTGTGCTCATT 1432
Query 1346 GCAAAAATACAATGGCCTACATTGGATTTGTAGAGGAGAAAGGAGCCCTGTATTGTGAGCTGTGCTATGAGAAA 1419
|||||||.||||||||||||||.||.||||||||||||||.|||||.|||||.||||||||.|||||||||||.
Sbjct 1433 GCAAAAACACAATGGCCTACATAGGCTTTGTAGAGGAGAAGGGAGCACTGTACTGTGAGCTATGCTATGAGAAG 1506
Query 1420 TTCTTTGCCCCTGAATGTGGTCGATGCCAAAGGAAGATCCTTGGAGAAGTCATCAATGCGTTGAAACAAACTTG 1493
||||||||.|||||||||||.||.|||||||||||||||||||||||||||||||||||.|||||.||.||.||
Sbjct 1507 TTCTTTGCTCCTGAATGTGGCCGGTGCCAAAGGAAGATCCTTGGAGAAGTCATCAATGCTTTGAAGCAGACCTG 1580
Query 1494 GCATGTTTCCTGTTTTGTGTGTGTAGCCTGTGGAAAGCCCATTCGGAACAATGTTTTTCACTTGGAGGATGGTG 1567
||||||.|||||||||||||||||.|||||||||||.||||||||.||.||||||||.||||||||.|||||.|
Sbjct 1581 GCATGTGTCCTGTTTTGTGTGTGTGGCCTGTGGAAAACCCATTCGTAATAATGTTTTCCACTTGGAAGATGGCG 1654
Query 1568 AACCCTACTGTGAGACTGATTATTATGCCCTCTTTGGTACTATATGCCATGGATGTGAATTTCCCATAGAAGCT 1641
|.||||||||||||||.||.||.||.|||||.|||||.||.|||||.|.||||||||||||.||||||||.|||
Sbjct 1655 AGCCCTACTGTGAGACAGACTACTACGCCCTTTTTGGAACAATATGTCGTGGATGTGAATTCCCCATAGAGGCT 1728
Query 1642 GGTGACATGTTCCTGGAAGCTCTGGGCTACACCTGGCATGACACTTGCTTTGTATGCTCAGTGTGTTGTGAAAG 1715
||||||||||||||||||||||||||.|||||.||||||||.|||||||||||.|||||.||||||||||||||
Sbjct 1729 GGTGACATGTTCCTGGAAGCTCTGGGATACACTTGGCATGATACTTGCTTTGTGTGCTCTGTGTGTTGTGAAAG 1802
Query 1716 TTTGGAAGGTCAGACCTTTTTCTCCAAGAAGGACAAGCCCCTGTGTAAGAAACATGCTCATTCTGTGAATTTT 1788
|||||||||.|||||.|||||||||||||||||||||||.||.||.||.||||||||||||||||||||||||
Sbjct 1803 TTTGGAAGGGCAGACATTTTTCTCCAAGAAGGACAAGCCACTTTGCAAAAAACATGCTCATTCTGTGAATTTT 1875
