Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07648
- Subject:
- XM_017319659.1
- Aligned Length:
- 2186
- Identities:
- 1221
- Gaps:
- 784
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
|||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct 149 TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGGGAGA 296
|||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||.|.||.||.|| ||.|
Sbjct 223 GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAA--GAAA 294
Query 297 ACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGG 370
|| |.||.|| |||||.|||
Sbjct 295 AC--------------ACACGTG--------------------------------------ACAAATAAC---- 312
Query 371 CCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
||| |||| ||||| ||||.|
Sbjct 313 CCT-------GGCA----------------CTGTG--------AAAATT------------------------- 330
Query 445 GCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCT 518
||||||
Sbjct 331 ----------------------CCACCT---------------------------------------------- 336
Query 519 GTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTA 592
Sbjct 337 -------------------------------------------------------------------------- 336
Query 593 AAACTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG 666
||||
Sbjct 337 AAAC---------------------------------------------------------------------- 340
Query 667 GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATGGCCCACCAAGAAAACACATTGTGGAGCGCTA 740
|||||||||||||||||||||||||||||.|
Sbjct 341 -------------------------------------------GCCCACCAAGAAAACACATTGTGGAGCGCAA 371
Query 741 TACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGC 814
.||.|||||||||||..||||||||||||||||||||||||||||..|.|||||||||||.|||||.|||||||
Sbjct 372 CACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCAAGAAACGGCTGATTGAGGACACTGAGGACTGGC 445
Query 815 GTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAA 888
|.||..||||||||||.|||||||||||.||||||||.||||||||||||||||||||||||||.|||.|||.|
Sbjct 446 GCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATCCTTGCCCAGATCACTGGGACTGAGCATCTGACA 519
Query 889 GAATCTGAAGCCGATAATACAAAGAAGGCAAA---TAAC---TCTCAGGA-----GCCTT-------------- 937
|||||||||...||.|||||.||||||||||| |.|| ||||.||| .||||
Sbjct 520 GAATCTGAAAATGACAATACGAAGAAGGCAAAGTTTTACAGTTCTCTGGAAGACCCCCTTAAGAACGGACCACA 593
Query 938 -----------CTCCGCAG------------------------------------------------------- 945
||||.|||
Sbjct 594 CCCACCTGCAGCTCCCCAGCTGTTAAAAGTTCATAGTCAAGTAGCCATAGTTTCTAAGGAAGCAGCCACTTACT 667
Query 946 --------------------------------------TTGG----------------------CTTC------ 953
|||| ||||
Sbjct 668 CTAGTGTAAGCAGGTCTACAAGAACTGTAGAAGGTGCTTTGGAAGGCTTTGGAAACTTTCCTGCCTTCTCCCCT 741
Query 954 ----CTCGGTA-------------------------GCTTCCAC-------------------------AC--G 971
||.|.|| |||.|||| || |
Sbjct 742 CCTACTAGATACAGTGCTGTAGTCGTCAGTGATGCGGCTGCCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAG 815
Query 972 GAGCAT--GCCC-GAGAGC------------CTGGA------------CAG-------CCCAA----------- 1000
|..|.| |||| ||.|.| ||||| ||| |||||
Sbjct 816 GCTCTTCGGCCCTGAAAACTCCCAGTCTCTTCTGGATGCACTGTGCATCAGCACTGTCCCCAAGCCTCTAGCTC 889
Query 1001 ---------------CCTCTG---------------------------------GCAG-----ACCAGGGG--T 1019
|||||| |||| .|||||.| |
Sbjct 890 TTTCCTGTCTTCAGTCCTCTGAGGAGTCGAGTGGCTCTGTCCACGTTAAGAAGAGCAGTAGCACCCAGGAGCCT 963
Query 1020 T-------ACCAGCCTCA----------CAACT----------------------------------------- 1035
| |||.||.||| ||.||
Sbjct 964 TCTCAGCAACCGGCGTCATCTGGAGCTTCACCTCTGAGCGCGTCTGAGGGCCCCGAGAGCCCAGGTTCCAGCAG 1037
Query 1036 -------------------------GCAGCTGCCTTCAAGCCTGTAGGATCCACTGGCGTCATCAAGTCACCAA 1084
||.|||||.||||||||||||||||||||..||| ||||||||||.|
Sbjct 1038 GCCCTCGGTGGCTGGCCTCCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCCACCAGCG---TCAAGTCACCTA 1108
Query 1085 GCTGGCAACGGCCAAACCAAGGAGTACCTTCCACTGGAAGAATCTCAAACAGCGCTGCTTACTCAGGATCAGTG 1158
|||||||.||.||||||||||.||.||||||.|||||.|||||.|||||||..||...||..|||||..|||.|
Sbjct 1109 GCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGAATTTCAAACAATGCACGTTCTTCAGGTACAGGG 1182
Query 1159 GCACCAGCCAACTCAG-CTTTGGGACAAACCCAGCCAAGTGACCAGGACACTTTAGTGCAAAGAGCTGAGCACA 1231
|| | ||.||||.|...||||||||||||||||.|||||..|.|||||.|||||.||.||||
Sbjct 1183 GC-------------GTCTGTGGGGCCTCCCCAGCCAAGTGACCAAGACACACTTGTGCAGAGAGCGGAACACA 1243
Query 1232 TTCCAGCAGGGAAACGAACTCCGATGTGCGCCCATTGTAACCAGGTCATCAGAGGACC-ATTCTTAGTGGCACT 1304
|||||||.||.||.||.||.||.|||||.|||||.||.|||||.||.|||||.||||| .||||| |||||.||
Sbjct 1244 TTCCAGCGGGCAAGCGGACCCCCATGTGTGCCCACTGCAACCAAGTTATCAGGGGACCTTTTCTT-GTGGCTCT 1316
Query 1305 GGGGAAATCTTGGCACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATTTGTAG 1378
||||||.||.|||||.|||||||||||.|||||.|||||.||||||||.||||||||||||||.||.|||||||
Sbjct 1317 GGGGAAGTCCTGGCATCCAGAAGAATTTAACTGTGCTCATTGCAAAAACACAATGGCCTACATAGGCTTTGTAG 1390
Query 1379 AGGAGAAAGGAGCCCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCCAAAGG 1452
|||||||.|||||.|||||.||||||||.|||||||||||.||||||||.|||||||||||.||.|||||||||
Sbjct 1391 AGGAGAAGGGAGCACTGTACTGTGAGCTATGCTATGAGAAGTTCTTTGCTCCTGAATGTGGCCGGTGCCAAAGG 1464
Query 1453 AAGATCCTTGGAGAAGTCATCAATGCGTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCCTGTGG 1526
||||||||||||||||||||||||||.|||||.||.||.||||||||.|||||||||||||||||.||||||||
Sbjct 1465 AAGATCCTTGGAGAAGTCATCAATGCTTTGAAGCAGACCTGGCATGTGTCCTGTTTTGTGTGTGTGGCCTGTGG 1538
Query 1527 AAAGCCCATTCGGAACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGAGACTGATTATTATGCCCTCT 1600
|||.||||||||.||.||||||||.||||||||.|||||.||.||||||||||||||.||.||.||.|||||.|
Sbjct 1539 AAAACCCATTCGTAATAATGTTTTCCACTTGGAAGATGGCGAGCCCTACTGTGAGACAGACTACTACGCCCTTT 1612
Query 1601 TTGGTACTATATGCCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCTACACC 1674
||||.||.|||||.|.||||||||||||.||||||||.|||||||||||||||||||||||||||||.|||||.
Sbjct 1613 TTGGAACAATATGTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACATGTTCCTGGAAGCTCTGGGATACACT 1686
Query 1675 TGGCATGACACTTGCTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAGAAGGA 1748
||||||||.|||||||||||.|||||.|||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 1687 TGGCATGATACTTGCTTTGTGTGCTCTGTGTGTTGTGAAAGTTTGGAAGGGCAGACATTTTTCTCCAAGAAGGA 1760
Query 1749 CAAGCCCCTGTGTAAGAAACATGCTCATTCTGTGAATTTT 1788
||||||.||.||.||.||||||||||||||||||||||||
Sbjct 1761 CAAGCCACTTTGCAAAAAACATGCTCATTCTGTGAATTTT 1800
