Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07649
- Subject:
- NM_001256427.2
- Aligned Length:
- 1464
- Identities:
- 605
- Gaps:
- 837
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGAAAAC 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||...||
Sbjct 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGCCCAC 296
Query 297 A--CA------------------------------------AGTGACAAATAA------CCCTGG--------- 317
| || ||.||||.|.|| |||.||
Sbjct 297 AGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAGGGACAGAGAAGAGGATCCCAGGGTGACAGTA 370
Query 318 -------CACTGTGAAAATCCCACCTAAACGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTAT 384
.|.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AACAGCAAAATGGGAAAATCCCACCTAAACGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTAT 444
Query 385 CATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGG 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGG 518
Query 459 AACAACTCAATCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCG 532
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCG 592
Query 533 ATAATACAAAGAAGGCAAA------------------------------------------------------- 551
|||||||||||||||||||
Sbjct 593 ATAATACAAAGAAGGCAAATAACTCTCAGGAGCCTTCTCCGCAGTTGGCTTCCTCGGTAGCTTCCACACGGAGC 666
Query 552 --------------GGAAA--------------AGA--------TACC-------------------CCTTCAC 570
|||.| ||| |||| ||||||.
Sbjct 667 ATGCCCGAGAGCCTGGACAGCCCAACCTCTGGCAGACCAGGGGTTACCAGCCTCACAGCTGCAGCTGCCTTCAA 740
Query 571 GTCTTTAG--TCC-----------CAAATACACAAAATTACGTGACTGGC---------ACCATGAAGT---TT 619
|.||.||| ||| |||.| |||.|| .||||| ||||.|.||| ||
Sbjct 741 GCCTGTAGGATCCACTGGCGTCATCAAGT-CACCAA--------GCTGGCAACGGCCAAACCAAGGAGTACCTT 805
Query 620 CAGCACGTG-----CTCTTAACGTACAG---------------------------------------------- 642
| ||| || .|||.|| ||||
Sbjct 806 C--CAC-TGGAAGAATCTCAA---ACAGCGCTACTTACTCAGGATCAGTGGCACCAGCCAACTCAGCTTTGGGA 873
Query 643 -------------------------------------------------------------------------- 642
Sbjct 874 CAAACCCAGCCAAGTGACCAGGACACTTTAGTGCAAAGAGCTGAGCACATTCCAGCAGGGAAACGAACTCCGAT 947
Query 643 -------------------------------------------------------------------------- 642
Sbjct 948 GTGCGCCCATTGTAACCAGGTCATCAGAGGACCATTCTTAGTGGCACTGGGGAAATCTTGGCACCCAGAAGAAT 1021
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1022 TCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATTTGTAGAGGAGAAAGGAGCCCTGTATTGTGAG 1095
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1096 CTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCCAAAGGAAGATCCTTGGAGAAGTCATCAGTGC 1169
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1170 GTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCCTGTGGAAAGCCCATTCGGAACAATGTTTTTC 1243
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1244 ACTTGGAGGATGGTGAACCCTACTGTGAGACTGATTATTATGCCCTCTTTGGTACTATATGCCATGGATGTGAA 1317
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1318 TTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCTACACCTGGCATGACACTTGCTTTGTATGCTC 1391
Query 643 ---------------------------------------------------------- 642
Sbjct 1392 AGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAGAAGGACAAGCCCCTG 1449