Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07649
• Subject: NM_019809.3
• Aligned Length: 1011
• Identities: 577
• Gaps: 369

Alignment

Query    1  ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA  74
            |||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct    1  ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA  74

Query   75  CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG  148
            ||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct   75  CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG  148

Query  149  TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA  222
            ||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct  149  TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG  222

Query  223  GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTT-----------------  279
            |||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||                 
Sbjct  223  GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGGGTGA  296

Query  280  -------------------CCTGT----------------------TCAAAAG---------------------  291
                               |||||                      ||.||||                     
Sbjct  297  ACCTAAGGAAGTAGTTAAGCCTGTGCCCATTACATCTCCTGCTGTATCCAAAGTCACTTCCACTACCAACATGG  370

Query  292  --------AAAACAC------------------------------AAGTGACA-------AATAACC-------  313
                    |||.|||                              ||||.|||       .||.|||       
Sbjct  371  CCTACAATAAAGCACCACGGCCCTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT  444

Query  314  ----------------------------------------------------------CTGGCACT--------  321
                                                                      |||.||||        
Sbjct  445  GCGTTCACCCCAGCCCATGCCGCCACTTCATCACATGCTTCCCCCACACCTGTGGCCGCTGCCACTCCCCTCCA  518

Query  322  --------------------------GTGAAAATC-----------------------CCACC---------TA  337
                                      |||..||||                       |||||         ||
Sbjct  519  CCTCTCTGCATCCGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTA  592

Query  338  AAC-----------------------------------------------------------------------  340
            |||                                                                       
Sbjct  593  AACCTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG  666

Query  341  -------------------------------------------GCCCACCAAGAAAACACATTGTGGAGCGCTA  371
                                                       |||||||||||||||||||||||||||||.|
Sbjct  667  GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGCCCACCAAGAAAACACATTGTGGAGCGCAA  740

Query  372  TACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGC  445
            .||.|||||||||||..||||||||||||||||||||||||||||..|.|||||||||||.|||||.|||||||
Sbjct  741  CACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCAAGAAACGGCTGATTGAGGACACTGAGGACTGGC  814

Query  446  GTCCAAGGACTGGAACAACTCAATCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAA  519
            |.||..||||||||||.|||||.|||||.||||||||.||||||||||||||||||||||||||.|||.|||.|
Sbjct  815  GCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATCCTTGCCCAGATCACTGGGACTGAGCATCTGACA  888

Query  520  GAATCTGAAGCCGATAATACAAAGAAGGCAAAGGAAAAGATACCCCTTCACGTCTTTAGTCCCAAATACACAAA  593
            |||||||||...||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAATCTGAAAATGACAATACGAAGAAGGCAAAGGAAAAGATACCCCTTCACGTCTTTAGTCCCAAATACACAAA  962

Query  594  ATTACGTGACTGGCACCATGAAGTTTCAGCACGTGCTCTTAACGTACAG  642
            ||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  963  ATTACGTGACTGGCACCATGAAGTTTCAGCACGTGCTCTTAATGTACAG  1011