Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07649
- Subject:
- XM_006501746.1
- Aligned Length:
- 1808
- Identities:
- 562
- Gaps:
- 1168
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
|||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct 149 TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTT----------------- 279
|||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||
Sbjct 223 GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGGGTGA 296
Query 280 -------------------CCTGT----------------------TCAAAAG--------------------- 291
||||| ||.||||
Sbjct 297 ACCTAAGGAAGTAGTTAAGCCTGTGCCCATTACATCTCCTGCTGTATCCAAAGTCACTTCCACTACCAACATGG 370
Query 292 -------------------------------------------AAAA--CACA--------------------- 299
|||| ||||
Sbjct 371 CCTACAATAAAGCACCACGGCCCTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Query 300 -------------------------------------------------------------------------- 299
Sbjct 445 GCGTTCACCCCAGCCCATGCCGCCACTTCATCACATGCTTCCCCCACACCTGTGGCCGCTGCCACTCCCCTCCA 518
Query 300 -------------------------AGTGACAA----------------------------------------- 307
||||.|||
Sbjct 519 CCTCTCTGCATCCGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTA 592
Query 308 -------------------------------------------------------------------------- 307
Sbjct 593 AACCTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG 666
Query 308 -------------------------------------------ATAACCCTGGCACTGTGAAAATCCCACCTAA 338
.|||||||||||||||||||||.||||||||
Sbjct 667 GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGCACTGTGAAAATTCCACCTAA 740
Query 339 ACGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCA 412
|||||||||||||||||||||||||||||||.|.||.|||||||||||..||||||||||||||||||||||||
Sbjct 741 ACGCCCACCAAGAAAACACATTGTGGAGCGCAACACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCA 814
Query 413 AGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAATCTCGCTCTTTCCGAATC 486
||||..|.|||||||||||.|||||.||||||||.||..||||||||||.|||||.|||||.||||||||.|||
Sbjct 815 AGAAACGGCTGATTGAGGACACTGAGGACTGGCGCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATC 888
Query 487 CTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCGATAATACAAAGAAGGCAA---------A 551
|||||||||||||||||||||||.|||.|||.||||||||||...||.|||||.|||||||||| |
Sbjct 889 CTTGCCCAGATCACTGGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAATAGCACCCA 962
Query 552 GGA------AAAGATACC-------------CCTTCACGTCT---------TTAG------------------T 579
||| ..||..||| .||||||.||| |.|| |
Sbjct 963 GGAGCCTTCTCAGCAACCGGCGTCATCTGGAGCTTCACCTCTGAGCGCGTCTGAGGGCCCCGAGAGCCCAGGTT 1036
Query 580 CC-----------------------------------------CAA---------ATACAC------AAAATTA 597
|| ||| ||.||| .||.|.|
Sbjct 1037 CCAGCAGGCCCTCGGTGGCTGGCCTCCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCCACCAGCGTCAAGTCA 1110
Query 598 CGTGACTGGC---------ACCATGAAG------------------TTTCA------GCACGTGCTCTTAACGT 638
|.|..||||| ||||.|.|| ||||| |||||| ||||.|.||
Sbjct 1111 CCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGAATTTCAAACAATGCACGT--TCTTCAGGT 1182
Query 639 ACAG---------------------------------------------------------------------- 642
||||
Sbjct 1183 ACAGGGGCGTCTGTGGGGCCTCCCCAGCCAAGTGACCAAGACACACTTGTGCAGAGAGCGGAACACATTCCAGC 1256
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1257 GGGCAAGCGGACCCCCATGTGTGCCCACTGCAACCAAGTTATCAGGGGACCTTTTCTTGTGGCTCTGGGGAAGT 1330
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1331 CCTGGCATCCAGAAGAATTTAACTGTGCTCATTGCAAAAACACAATGGCCTACATAGGCTTTGTAGAGGAGAAG 1404
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1405 GGAGCACTGTACTGTGAGCTATGCTATGAGAAGTTCTTTGCTCCTGAATGTGGCCGGTGCCAAAGGAAGATCCT 1478
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1479 TGGAGAAGTCATCAATGCTTTGAAGCAGACCTGGCATGTGTCCTGTTTTGTGTGTGTGGCCTGTGGAAAACCCA 1552
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1553 TTCGTAATAATGTTTTCCACTTGGAAGATGGCGAGCCCTACTGTGAGACAGACTACTACGCCCTTTTTGGAACA 1626
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1627 ATATGTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACATGTTCCTGGAAGCTCTGGGATACACTTGGCATGA 1700
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1701 TACTTGCTTTGTGTGCTCTGTGTGTTGTGAAAGTTTGGAAGGGCAGACATTTTTCTCCAAGAAGGACAAGCCAC 1774
Query 643 -------------------------------- 642
Sbjct 1775 TTTGCAAAAAACATGCTCATTCTGTGAATTTT 1806
