Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07695
- Subject:
- XR_001753590.2
- Aligned Length:
- 3327
- Identities:
- 1862
- Gaps:
- 1451
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTTTCTTCCCTATTTCCCTGCATTTCTCTTCTGTGCTCACTGCCACACGCAGCTCAGCCTGGGCGGCACAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGATGCGAGATGCGTCTCTGCTGATCTGAGTCTGCCTGCAGCATGGACCTGGGTCTTCCCTGAAGCATCTCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTGGAGGGACGACTGCCATGATGACAGCACCCCATGAGAAGAAGGACCCAGCCTCCGATTGGCCACACTCTG 222
Query 1 ---------------------------------------------------------------------ATGAC 5
|||||
Sbjct 223 TGTGTCTCTCTATCCTGCCAGCACCGAGGGCTCATCCATCCACAGAGCAGGGCAGTGGGAGGAGACGCCATGAC 296
Query 6 CCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCACCTCC 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCACCTCC 370
Query 80 CCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTCAGGGG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTCAGGGG 444
Query 154 GGCCAGGAGACCCAGGAGTACCGTCTATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCACAGGA 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCCAGGAGACCCAGGAGTACCGTCTATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCACAGGA 518
Query 228 GCTTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACATGCAGGGCGGTATCGCTGTTACTATG 301
||||||||||||||||||||||||||||||||||||||||||||||||..||||||||||||||||||||||||
Sbjct 519 GCTTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTGTTACTATG 592
Query 302 GTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACATCAAACCC 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACATCAAACCC 666
Query 376 ACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCACAGGTGGC 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCACAGGTGGC 740
Query 450 ATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCCCCATGCCC 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCCCCATGCCC 814
Query 524 GTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGTGCTATGCT 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGTGCTATGCT 888
Query 598 TATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGTGTTTCTAA 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGTGTTTCTAA 962
Query 672 GAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTGTGGCTCTG 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTGTGGCTCTG 1036
Query 746 ATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCGCACAGCCC 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCGCACAGCCC 1110
Query 820 CAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGATGCTA 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGATGCTA 1184
Query 894 CGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGGACA----- 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|
Sbjct 1185 CGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGGTGAGGAGC 1258
Query 963 -------GTTCTAT----GACAGAGTCT---------CCCTCTCGGTG-----CAGCCGGGCCCCACGGTGGCC 1011
||||..| |||..||.|| ||||..|||.| |||||||||||||||||||||
Sbjct 1259 CCAGCGGGTTCAGTCAGGGACCCAGGCTCCGCACAGGCCCTGCCGGGGGAGCTCAGCCGGGCCCCACGGTGGCC 1332
Query 1012 TCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAAACTTTCCTTCTGACCAAGGAGGGGGC 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAAACTTTCCTTCTGACCAAGGAGGGGGC 1406
Query 1086 AGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCATGGGTCCTG 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCATGGGTCCTG 1480
Query 1160 TGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCTCCAAACCCTACCTGCTGACTCACCCC 1233
|||||||||||||||||||||||||
Sbjct 1481 TGACCTCAGCCCATGCGGGGACCTA------------------------------------------------- 1505
Query 1234 AGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGCCCCAGCTCCCCGACAACAGGCCCCACCTCCAC 1307
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1506 -------------------------CAGGACCGTCTGGGGGCCCCAGCTCCCCGACAACAGGCCCCACCTCCAC 1554
Query 1308 ATCT---GGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGGTCTGGGAAGGCACCTGG 1378
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATCTGCAGGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGGTCTGGGAAGGCACCTGG 1628
Query 1379 GGGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGA 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGA 1702
Query 1453 CATCGACGTCAGGGCAAACACTGGACATCGACCCAGAGAAAGGCTGATTTCCAACATCCTGCAGGGGCTGTGGG 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CATCGACGTCAGGGCAAACACTGGACATCGACCCAGAGAAAGGCTGATTTCCAACATCCTGCAGGGGCTGTGGG 1776
Query 1527 GCCAGAGCCCACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAGCTGCCGATGCCCAGGAAGAAAACCTCTATG 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCCAGAGCCCACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAGCTGCCGATGCCCAGGAAGAAAACCTCTATG 1850
Query 1601 CTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCG---GAGCCCACACGATGAAGACCCC 1671
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1851 CTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCGGCAGAGCCCACACGATGAAGACCCC 1924
Query 1672 CAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTC 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTC 1998
Query 1746 TGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTG 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTG 2072
Query 1820 AAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCA 1893
||||||||||||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||
Sbjct 2073 AAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCA 2146
Query 1894 TCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCCAC----------------- 1950
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCCACTAGCCCAGGGGGGGACG 2220
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2221 CAGACCCCACACTCCATGGAGTCTGGAATGCATGGGAGCTGCCCCCCCAGTGGACACCATTGGACCCCACCCAG 2294
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2295 CCTGGATCTACCCCAGGAGACTCTGGGAACTTTTAGGGGTCACTCAATTCTGCAGTATAAATAACTAATGTCTC 2368
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2369 TACAATTTTGAAATAAAGCAACAGACTTCTCAATAATCAATGAAGTAGCTGAGAAAACTAAGTCAGAAAGTGCA 2442
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2443 TTAAACTGAATCACAATGTAAATATTACACATCAAGCGATGAAACTGGAAAACTACAAGCCACGAATGAATGAA 2516
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2517 TTAGGAAAGAAAAAAAGTAGGAAATGAATGATCTTGGCTTTCCTATAAGAAATTTAGGGCAGGGCACGGTGGCT 2590
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2591 CACGCCTGTAATTCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGTTCAGGAGATCGAGACCATCTTGG 2664
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2665 CCAACATGGTGAAACCCTGTCTCTCCTAAAAATACAAAAATTAGCTGGATGTGGTGGCAGTGCCTGTAATCCCA 2738
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2739 GCTATTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGAGTCAGAGGTTTCAGTGAGCCAAGATCGCACC 2812
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2813 ACTGCTCTCCAGCCTGGCGACAGAGGGAGACTCCATCTCAAATTAAAAAAAAAAAAAAAAAAGAAAGAAAAAGA 2886
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2887 GAAAAAAGAAATTTAGAAGAATAACAAGTTATTCCAAATGAAGGCGTAAGAAAGGGAATAATAACAATAATAAG 2960
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2961 AGGAGTTGTTCATGAGGAAAAACCAAAGCTTGAAAATTCAACAAAGCCAGTGAAGCTCATTCTTGAAAACATGA 3034
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 3035 ATCACACTCATGAATTCTAACTACAATGAAAAAGAGAAAGAAAGAGCAGGCATGCATTTCCATATGGGAGTGAG 3108
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 3109 CCAGCAGACAGCCCTACAGATCGTACACACGTTTTCCAAAACTAACAATGGAACAGGCGGCAAACCTATGCCAA 3182
Query 1951 ----------------------------------------------------------------------- 1950
Sbjct 3183 TATACTAGAAATTGCAGATTAAATAGATGAAATATTCTAAACTGGAGTTTACATAATGAACATAAGAGTAA 3253
