Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07730
- Subject:
- XM_011526332.3
- Aligned Length:
- 2000
- Identities:
- 1238
- Gaps:
- 619
Alignment
Query 1 ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGGCA 74
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1 ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCA 74
Query 75 CCTCCCCAAGCCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCATCCAGGGAAGTCCTGTGACCCTCAGGTGTC 148
|||||||||||||||||||||||||||.||||||||||||||||.||||||.||||||||||||||||||||||
Sbjct 75 CCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTC 148
Query 149 AGGGGAGCCTTCAGGCTGAGGAGTACCATCTATATAGGGAAAACAAATCAGCATCCTGGGTTAGACGGAT---A 219
|||||.|||...||.|..|||||||||.|||||||||.|||||.|||.|||||.|||||.|||.|||||| |
Sbjct 149 AGGGGGGCCAGGAGACCCAGGAGTACCGTCTATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCA 222
Query 220 CAAGAGCCTGGGAAGAATGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACGCAGGGCGGTATCACTGTCA 293
||.||||.||.||||||.||||||||||||||||||||||||||||||||||||.||||||||||||.||||
Sbjct 223 CAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTGT-- 294
Query 294 GTACTA---CAGCCACAATCACT-CA------TCAGAGTACAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCC 357
||||| .|||.| |||| || ||||||..||||||||||||||||||||||||||||||||||
Sbjct 295 -TACTATGGTAGCGA----CACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCC 363
Query 358 TACAGCAAACCCACCCTCTCAGCTCTGCCCAGCCCTGTGGTGACCTTAGGAGGGAACGTGACCCTCCAGTGTGT 431
||||.||||||||||||||||||.|.|||||||||.|||||||.||.|||||||||.||.|||||||||||||.
Sbjct 364 TACATCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGA 437
Query 432 CTCACAGGTGGCATTTGACGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAACGCCTGAACTCCC 505
||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 438 CTCACAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCC 511
Query 506 ATTCCCATGCCCGTGGGTGGTCCTGGGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTCGTAC 579
|..|||||||||||||||.||||.|.|||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 512 AGCCCCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTAC 585
Query 580 AGGTGCTATGCTTATGACTCGAACTCTCCCTATGTGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCC 653
||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.
Sbjct 586 AGGTGCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCT 659
Query 654 AGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATGGTGGCCCCTGGGGAGAGCCTGACCCTCC 727
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||.|||||.||||||.||.|
Sbjct 660 AGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGC 733
Query 728 AGTGTGTCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGAGAACGTGACTTCCTCCAGCGCCCT 801
||||||.||||||||..||||||.||||||||||||||||||||||.||.||||||||||||||.||||.|.||
Sbjct 734 AGTGTGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCT 807
Query 802 GGTTGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCCCTCCCACGGGGGCCA 875
||....||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.||||||||||
Sbjct 808 GGCGCACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCA 881
Query 876 GTACAGATGCTACAGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCA 949
|||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||.
Sbjct 882 GTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCG 955
Query 950 CAGGACA------------GTTCTATGACAGACCC-------------TCTCTCTCGGTG-----CAGCCGGTC 993
||||..| ||||..|.|..||||| .|.||..|||.| |||||||.|
Sbjct 956 CAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCCGCACAGGCCCTGCCGGGGGAGCTCAGCCGGGC 1029
Query 994 CCCACAGTAGCCCCAGGAAAGAACGTGACCCTGCTGTGTCAGTCACGGGGGCAGTTCCACACTTTCCTTCTGAC 1067
|||||.||.|||.|||||.|||||||||||||||||||||||||||.|||...|.|.||.||||||||||||||
Sbjct 1030 CCCACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAAACTTTCCTTCTGAC 1103
Query 1068 CAAGGAGGGGGCAGGCCATCCCCCACTGCATCTGAGATCAGAGCACCAAGCTCAGCAGAACCAGGCTGAATTCC 1141
||||||||||||||...||..||||..||.|||.||||||..|.|||||.||||..|..|||||||||||||||
Sbjct 1104 CAAGGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCC 1177
Query 1142 GCATGGGTCCTGTGACCTCAGCCCACGTGGGGACCTACAGATGCTACAGCTCACTCAGCTCCAACCCCTACCTG 1215
.||||||||||||||||||||||||.|.||||||||||||.||||||.||||||..||||||||.|||||||||
Sbjct 1178 CCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCTCCAAACCCTACCTG 1251
Query 1216 CTGTCTCTCCCCAGTGACCCCCTGGAGCTCGTGGTCTCAG---------------------------------- 1255
|||.|||.||||||||||||||||||||||||||||||||
Sbjct 1252 CTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGCCCCAGCTCCCCGACAACAGG 1325
Query 1256 -----------CAT-------CCCT-------AGGCCAACACCCCCA-------GGAT-TACACAGTGGAGAAT 1296
||| |||| ||.||..|||||||| |||| ..||.||||| |
Sbjct 1326 CCCCACCTCCACATCTGCAGGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGG----T 1395
Query 1297 CT-------CATCCGCATGGG---TGTGGCTGG---CTTGG---------TCCTGGTGGTCCTC---------- 1338
|| || |.|||| ||||...|| ||||| ||||..||.|||||
Sbjct 1396 CTGGGAAGGCA----CCTGGGGGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCC 1465
Query 1339 -------------------------------GGG---ATTCT--------------------GCT-ATTT---- 1353
||| |..|| ||| ||||
Sbjct 1466 TCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGACCCAGAGAAAGGCTGATTTCCAA 1539
Query 1354 ---------GAGGCT-------CAG----CACAGCCAGAGAAGCCTACA----AGATGCAGCCGGG-------- 1395
|.|||| ||| |||||.||||| ||||.|| ||.|.|||||..|
Sbjct 1540 CATCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAG--GCCTGCAGTGGAGGTCCAGCCCAGCTGCCGAT 1611
Query 1396 ----AGG------------------------------------------------------------------- 1398
|||
Sbjct 1612 GCCCAGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCGGAG 1685
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1686 CCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCT 1759
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1760 CTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGAC 1833
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1834 ACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGA 1907
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1908 GGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCC 1981
Query 1399 -- 1398
Sbjct 1982 AC 1983
