Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07730
- Subject:
- XM_017026188.1
- Aligned Length:
- 2021
- Identities:
- 1247
- Gaps:
- 640
Alignment
Query 1 ---------------------------------------------------ATGACCCCCATCCTCACGGTCCT 23
|||||||||||||||||||||||
Sbjct 1 ATGCACCGAGGGCTCATCCATCCACAGAGCAGGGCAGTGGGAGGAGACGCCATGACCCCCATCCTCACGGTCCT 74
Query 24 GATCTGTCTCGGGCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGG 97
||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGG 148
Query 98 CTGAGCCAGGCTCTGTGATCATCCAGGGAAGTCCTGTGACCCTCAGGTGTCAGGGGAGCCTTCAGGCTGAGGAG 171
||||.||||||||||||||||.||||||.|||||||||||||||||||||||||||.|||...||.|..|||||
Sbjct 149 CTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTCAGGGGGGCCAGGAGACCCAGGAG 222
Query 172 TACCATCTATATAGGGAAAACAAATCAGCATCCTGGGTTAGACGGAT---ACAAGAGCCTGGGAAGAATGGCCA 242
||||.|||||||||.|||||.|||.|||||.|||||.|||.|||||| |||.||||.||.||||||.|||||
Sbjct 223 TACCGTCTATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGCCA 296
Query 243 GTTCCCCATCCCATCCATCACCTGGGAACACGCAGGGCGGTATCACTGTCAGTACTA---CAGCCACAATCACT 313
|||||||||||||||||||||||||||||||.||||||||||||.|||| ||||| .|||.| ||||
Sbjct 297 GTTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTGT---TACTATGGTAGCGA----CACT 363
Query 314 -CA------TCAGAGTACAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACAGCAAACCCACCCTCTCAGC 380
|| ||||||..||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 364 GCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACATCAAACCCACCCTCTCAGC 437
Query 381 TCTGCCCAGCCCTGTGGTGACCTTAGGAGGGAACGTGACCCTCCAGTGTGTCTCACAGGTGGCATTTGACGGCT 454
.|.|||||||||.|||||||.||.|||||||||.||.|||||||||||||.||||||||||||||||||.||||
Sbjct 438 CCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCACAGGTGGCATTTGATGGCT 511
Query 455 TCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAACGCCTGAACTCCCATTCCCATGCCCGTGGGTGGTCC 528
||||||||||||||||||||||||||||||||||||||.|||||||||||||..|||||||||||||||.||||
Sbjct 512 TCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCCCCATGCCCGTGGGTCGTCC 585
Query 529 TGGGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTCGTACAGGTGCTATGCTTATGACTCGAA 602
.|.|||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 586 CGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGTGCTATGCTTATGACTCGAA 659
Query 603 CTCTCCCTATGTGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCCAGGTGTTTCTAAGAAGCCATCAC 676
|||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 660 CTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGTGTTTCTAAGAAGCCATCAC 733
Query 677 TCTCAGTGCAGCCAGGTCCTATGGTGGCCCCTGGGGAGAGCCTGACCCTCCAGTGTGTCTCTGATGTCGGCTAC 750
||||||||||||||||||||||.||||||||||.|||||.||||||.||.|||||||.||||||||..||||||
Sbjct 734 TCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTGTGGCTCTGATGCTGGCTAC 807
Query 751 GACAGATTTGTTCTGTATAAGGAGGGAGAACGTGACTTCCTCCAGCGCCCTGGTTGGCAGCCCCAGGCTGGGCT 824
.||||||||||||||||||||||.||.||||||||||||||.||||.|.||||....|||||||||||||||||
Sbjct 808 AACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCGCACAGCCCCAGGCTGGGCT 881
Query 825 CTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCCCTCCCACGGGGGCCAGTACAGATGCTACAGTGCACACA 898
|||||||||||||||||||||||||||||||||||.||||.|||||||||||||||||||||||.|||||||||
Sbjct 882 CTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGATGCTACGGTGCACACA 955
Query 899 ACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCACAGGACAGTTCTATGACAGACCC 972
||||||||||||||||||||||||||||.|||||||||||||||||||||.||||||||||||||||||||..|
Sbjct 956 ACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGGACAGTTCTATGACAGAGTC 1029
Query 973 TCTCTCTCGGTGCAGCCGGTCCCCACAGTAGCCCCAGGAAAGAACGTGACCCTGCTGTGTCAGTCACGGGGGCA 1046
||.||||||||||||||||.||||||.||.|||.|||||.|||||||||||||||||||||||||||.|||...
Sbjct 1030 TCCCTCTCGGTGCAGCCGGGCCCCACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGATG 1103
Query 1047 GTTCCACACTTTCCTTCTGACCAAGGAGGGGGCAGGCCATCCCCCACTGCATCTGAGATCAGAGCACCAAGCTC 1120
|.|.||.||||||||||||||||||||||||||||...||..||||..||.|||.||||||..|.|||||.|||
Sbjct 1104 GATGCAAACTTTCCTTCTGACCAAGGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTC 1177
Query 1121 AGCAGAACCAGGCTGAATTCCGCATGGGTCCTGTGACCTCAGCCCACGTGGGGACCTACAGATGCTACAGCTCA 1194
|..|..|||||||||||||||.||||||||||||||||||||||||.|.||||||||||||.||||||.|||||
Sbjct 1178 AAAAATACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCA 1251
Query 1195 CTCAGCTCCAACCCCTACCTGCTGTCTCTCCCCAGTGACCCCCTGGAGCTCGTGGTCTCAG------------- 1255
|..||||||||.||||||||||||.|||.||||||||||||||||||||||||||||||||
Sbjct 1252 CAGAGCTCCAAACCCTACCTGCTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGG 1325
Query 1256 --------------------------------CAT-------CCCT-------AGGCCAACACCCCCA------ 1277
||| |||| ||.||..||||||||
Sbjct 1326 CCCCAGCTCCCCGACAACAGGCCCCACCTCCACATCTGCAGGCCCTGAGGACCAGCCCCTCACCCCCACCGGGT 1399
Query 1278 -GGAT-TACACAGTGGAGAATCT-------CATCCGCATGGG---TGTGGCTGG---CTTGG---------TCC 1327
|||| ..||.||||| ||| || |.|||| ||||...|| ||||| |||
Sbjct 1400 CGGATCCCCAGAGTGG----TCTGGGAAGGCA----CCTGGGGGTTGTGATCGGCATCTTGGTGGCCGTCATCC 1465
Query 1328 TGGTGGTCCTC-----------------------------------------GGG---ATTCT----------- 1346
|..||.||||| ||| |..||
Sbjct 1466 TACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGACC 1539
Query 1347 ---------GCT-ATTT-------------GAGGCT-------CAG----CACAGCCAGAGAAGCCTACA---- 1382
||| |||| |.|||| ||| |||||.||||| ||||.||
Sbjct 1540 CAGAGAAAGGCTGATTTCCAACATCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAG--GCCTGCAGTGG 1611
Query 1383 AGATGCAGCCGGG------------AGG---------------------------------------------- 1398
||.|.|||||..| |||
Sbjct 1612 AGGTCCAGCCCAGCTGCCGATGCCCAGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGG 1685
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1686 GGTGGAGATGGACACTCGGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCA 1759
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1760 GACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCG 1833
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1834 GAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCA 1907
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1908 CAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCA 1981
Query 1399 ----------------------- 1398
Sbjct 1982 TCTACGCCACTCTGGCCATCCAC 2004
