Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07731
• Subject: NM_001284311.1
• Aligned Length: 1122
• Identities: 832
• Gaps: 285

Alignment

Query    1  ATGGCCAAGAAGCGGCGCAGGGCGGTCCTGGAGCTGCTGCAGCGGCCGGGGAACGCGCGCTGCGCGGACTGCGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGCCCCGGATCCCGACTGGGCCTCCTACACTCTGGGCGTCTTCATCTGCCTGAGCTGCTCGGGAATCCACCGGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATATCCCCCAGGTCAGCAAGGTGAAGTCCGTCCGCCTGGACGCCTGGGAGGAGGCCCAAGTGGAGTTCATGGCC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCCCACGGGAACGACGCCGCGAGAGCCAGGTTTGAGTCCAAAGTACCCTCCTTCTACTACCGGCCCACGCCCTC  296
                                                   |..|||      ||               |.|.||
Sbjct    1  ---------------------------------------ATGGTA------TT---------------GGCTTC  14

Query  297  CGACTGCCAGCTCCTTCGAGAGCAGTGGATCCGGGCCAAGTACGAGCGACAGGAGTTCATCTACCCGGAGAAGC  370
              ||| |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   15  --ACT-CGAGCTCCTTCGAGAGCAGTGGATCCGGGCCAAGTACGAGCGACAGGAGTTCATCTACCCGGAGAAGC  85

Query  371  AGGAGCCCTACTCGGCAGGGTACCGTGAGGGTTTTCTCTGGAAGCGTGGCCGGGACAACGGGCAGTTTTTGAGC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   86  AGGAGCCCTACTCGGCAGGGTACCGTGAGGGTTTTCTCTGGAAGCGTGGCCGGGACAACGGGCAGTTTTTGAGC  159

Query  445  CGGAAGTTTGTGCTGACAGAACGAGAGGGTGCTCTGAAGTATTTCAACAGAAATGATGCCAAGGAGCCCAAGGC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  160  CGGAAGTTTGTGCTGACAGAACGAGAGGGTGCTCTGAAGTATTTCAACAGAAATGATGCCAAGGAGCCCAAGGC  233

Query  519  CGTGATGAAGATCGAGCACCTGAACGCCACCTTCCAGCCGGCCAAGATCGGCCACCCCCACGGCCTGCAGGTCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  234  CGTGATGAAGATCGAGCACCTGAACGCCACCTTCCAGCCGGCCAAGATCGGCCACCCCCACGGCCTGCAGGTCA  307

Query  593  CCTACCTGAAGGACAACAGCACCCGTAACATCTTCATCTACCATGAGGACGGGAAGGAGATTGTGGACTGGTTC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  308  CCTACCTGAAGGACAACAGCACCCGTAACATCTTCATCTACCATGAGGACGGGAAGGAGATTGTGGACTGGTTC  381

Query  667  AATGCACTCCGAGCTGCTCGCTTCCACTACCTGCAGGTGGCATTCCCAGGGGCCAGCGACGCAGATCTGGTGCC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  382  AATGCACTCCGAGCTGCTCGCTTCCACTACCTGCAGGTGGCATTCCCAGGGGCCAGCGACGCAGATCTGGTGCC  455

Query  741  AAAGCTCTCCAGGAACTACCTGAAGGAAGGCTACATGGAGAAGACGGGGCCCAAGCAAACGGAAGGCTTCCGGA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  456  AAAGCTCTCCAGGAACTACCTGAAGGAAGGCTACATGGAGAAGACGGGGCCCAAGCAAACGGAAGGCTTCCGGA  529

Query  815  AGCGCTGGTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTTCGCCCGAGGGGAA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  530  AGCGCTGGTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTTCGCCCGAGGGGAA  603

Query  889  GTCTTCATTGGCAGCAAGGAGAGTGGCTACACGGTGCTGCATGGGTTCCCGCCGTCCACCCAGGGCCACCACTG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  604  GTCTTCATTGGCAGCAAGGAGAGTGGCTACACGGTGCTGCATGGGTTCCCGCCGTCCACCCAGGGCCACCACTG  677

Query  963  GCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  678  GCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGG  751

Query 1037  AGTGGGTGGCGGCCTTCCAGAAGGCGGTGGACAGGCCCATGCTGCCCCAGGAGTACGCAGTGGAGGCGCACTTC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  752  AGTGGGTGGCGGCCTTCCAGAAGGCGGTGGACAGGCCCATGCTGCCCCAGGAGTACGCAGTGGAGGCGCACTTC  825

Query 1111  AAGCATAAACCT  1122
            ||||||||||||
Sbjct  826  AAGCATAAACCT  837